RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 SH3GLB1Q9Y371 365 aa3.41□□□□□ -1.86
CCNT1-203ENST00000550457 SLC4A4Q9Y6R1 1079 aa3.41□□□□□ -1.86
CCNT1-203ENST00000550457 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.41□□□□□ -1.86
CCNT1-203ENST00000550457 UMODL1Q5DID0 1318 aa3.41□□□□□ -1.86
CCNT1-203ENST00000550457 CASZ1Q86V15 1759 aa3.4□□□□□ -1.86
CCNT1-203ENST00000550457 TMEM221A6NGB7 291 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 FZD9O00144 591 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 EPHB6O15197 1021 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 CBFA2T3O75081 653 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 ZBED4O75132 1171 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 FKBP6O75344 327 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 CIB2O75838 187 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 MTA2O94776 668 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 NXPH3O95157 252 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 PDE8BO95263 885 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 TGDSO95455 350 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 PSMG1O95456 288 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 CHEK2O96017 543 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 SHBGP04278 402 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 EIF2S1P05198 315 aaKnown RBP3.4□□□□□ -1.87
CCNT1-203ENST00000550457 LYNP07948 512 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 BRAFP15056 766 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 PHKG2P15735 406 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 TAC1P20366 129 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 CRABP2P29373 138 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 CCKBRP32239 447 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 CYP2C18P33260 490 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 STAT1P42224 750 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 PHKA1P46020 1223 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 RPL5P46777 297 aaKnown RBP3.4□□□□□ -1.87
CCNT1-203ENST00000550457 IFNAR2P48551 515 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 EEFSECP57772 596 aaKnown RBP3.4□□□□□ -1.87
CCNT1-203ENST00000550457 AP2B1P63010 937 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 CYP4F2P78329 520 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 PHEXP78562 749 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 DCTN2Q13561 401 aaKnown RBP3.4□□□□□ -1.87
CCNT1-203ENST00000550457 DAZAP2Q15038 168 aaPredicted RBP3.4□□□□□ -1.87
CCNT1-203ENST00000550457 RCN1Q15293 331 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 PDK4Q16654 411 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 EXOC3L4Q17RC7 722 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 TMEM266Q2M3C6 531 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 TRMT5Q32P41 509 aaKnown RBP3.4□□□□□ -1.87
CCNT1-203ENST00000550457 KBTBD12Q3ZCT8 623 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 EARS2Q5JPH6 523 aaKnown RBP3.4□□□□□ -1.87
CCNT1-203ENST00000550457 ZNF618Q5T7W0 954 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 RNF220Q5VTB9 566 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 KRT79Q5XKE5 535 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 TBC1D9BQ66K14 1250 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 RUSC1-AS1Q66K80 236 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 ANKRD16Q6P6B7 361 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 VSTM1Q6UX27 236 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 B3GNT6Q6ZMB0 384 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 LDHAL6AQ6ZMR3 332 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 CATSPERGQ6ZRH7 1159 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 SEPT14Q6ZU15 432 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 EPM2AIP1Q7L775 607 aaPredicted RBP3.4□□□□□ -1.87
CCNT1-203ENST00000550457 NET1Q7Z628 596 aaPredicted RBP3.4□□□□□ -1.87
CCNT1-203ENST00000550457 ZNF554Q86TJ5 538 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 CHSY1Q86X52 802 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 DGKHQ86XP1 1220 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 DDX42Q86XP3 938 aaKnown RBP eCLIP3.4□□□□□ -1.87
CCNT1-203ENST00000550457 ECHDC2Q86YB7 292 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 MYLK4Q86YV6 388 aaPredicted RBP3.4□□□□□ -1.87
CCNT1-203ENST00000550457 SYCP3Q8IZU3 236 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 VPS52Q8N1B4 723 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 ZBTB8BQ8NAP8 495 aaPredicted RBP3.4□□□□□ -1.87
CCNT1-203ENST00000550457 KIAA0895Q8NCT3 520 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 FBXO25Q8TCJ0 367 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 TRPC4APQ8TEL6 797 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 DIS3LQ8TF46 1054 aaKnown RBP3.4□□□□□ -1.87
CCNT1-203ENST00000550457 DDI1Q8WTU0 396 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 NAT14Q8WUY8 206 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 SCFD1Q8WVM8 642 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 HPS3Q969F9 1004 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 MCUR1Q96AQ8 359 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 HAUS1Q96CS2 278 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 ERP27Q96DN0 273 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 NSL1Q96IY1 281 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 CDK5RAP3Q96JB5 506 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 AGAP3Q96P47 875 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 BTBD9Q96Q07 612 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 TINAGL1Q9GZM7 467 aaPredicted RBP3.4□□□□□ -1.87
CCNT1-203ENST00000550457 NT5C3AQ9H0P0 336 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 MYLK2Q9H1R3 596 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 GANQ9H2C0 597 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 DHX36Q9H2U1 1008 aaKnown RBP3.4□□□□□ -1.87
CCNT1-203ENST00000550457 Q9H521 79 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 LRRC19Q9H756 370 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 PREBQ9HCU5 417 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 POLD4Q9HCU8 107 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 KCNK9Q9NPC2 374 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 TRPV5Q9NQA5 729 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 PIH1D3Q9NQM4 214 aaKnown RBP3.4□□□□□ -1.87
CCNT1-203ENST00000550457 PDGFCQ9NRA1 345 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 MKS1Q9NXB0 559 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 MTMR4Q9NYA4 1195 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 GRHL1Q9NZI5 618 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 ARMCX3Q9UH62 379 aaPredicted RBP3.4□□□□□ -1.87
CCNT1-203ENST00000550457 TMED5Q9Y3A6 229 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 PCDHA3Q9Y5H8 950 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms