RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 DENND5AQ6IQ26 1287 aa13.12□□□□□ -0.31
RAB5C-206ENST00000550406 RANBP10Q6VN20 620 aa13.12□□□□□ -0.31
RAB5C-206ENST00000550406 GSTA5Q7RTV2 222 aa13.12□□□□□ -0.31
RAB5C-206ENST00000550406 SLC41A1Q8IVJ1 513 aa13.12□□□□□ -0.31
RAB5C-206ENST00000550406 CCDC89Q8N998 374 aa13.12□□□□□ -0.31
RAB5C-206ENST00000550406 IPMKQ8NFU5 416 aa13.12□□□□□ -0.31
RAB5C-206ENST00000550406 FEM1CQ96JP0 617 aa13.12□□□□□ -0.31
RAB5C-206ENST00000550406 KRT12Q99456 494 aa13.12□□□□□ -0.31
RAB5C-206ENST00000550406 PRRX2Q99811 253 aa13.12□□□□□ -0.31
RAB5C-206ENST00000550406 DUSP15Q9H1R2 295 aaPredicted RBP13.12□□□□□ -0.31
RAB5C-206ENST00000550406 VPS45Q9NRW7 570 aa13.12□□□□□ -0.31
RAB5C-206ENST00000550406 ZFR2Q9UPR6 939 aaKnown RBP13.12□□□□□ -0.31
RAB5C-206ENST00000550406 WDFY4Q6ZS81 3184 aa13.12□□□□□ -0.31
RAB5C-206ENST00000550406 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 A0A0J9YYE9 177 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 A0A1W2PQ67 120 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 A8MX80 341 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 ANKRD66B4E2M5 251 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 USP12O75317 370 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 ANXA9O76027 345 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 NDST3O95803 873 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 TRBC1P01850 177 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 IGHV4-34P06331 123 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 ALPIP09923 528 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 GM2AP17900 193 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 IVDP26440 423 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 CNR2P34972 360 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 HNF1BP35680 557 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 MMP12P39900 470 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 RPL26P61254 145 aaKnown RBP13.11□□□□□ -0.31
RAB5C-206ENST00000550406 PPP2CBP62714 309 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 POLR2LP62875 67 aaKnown RBP13.11□□□□□ -0.31
RAB5C-206ENST00000550406 PPP2CAP67775 309 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 MRPS25P82663 173 aaKnown RBP13.11□□□□□ -0.31
RAB5C-206ENST00000550406 LMNB2Q03252 620 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 SFSWAPQ12872 951 aaKnown RBP13.11□□□□□ -0.31
RAB5C-206ENST00000550406 SEMA5AQ13591 1074 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 CDKN3Q16667 212 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 PLK5Q496M5 336 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 SIRPB2Q5JXA9 342 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 TMEFF1Q8IYR6 380 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 CBARPQ8N350 705 aaPredicted RBP13.11□□□□□ -0.31
RAB5C-206ENST00000550406 SLC25A41Q8N5S1 370 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 PDCD7Q8N8D1 485 aaKnown RBP13.11□□□□□ -0.31
RAB5C-206ENST00000550406 LPCAT1Q8NF37 534 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 OR2T34Q8NGX1 318 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 RAB7BQ96AH8 199 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 SCRN2Q96FV2 425 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 ZC3H10Q96K80 434 aaKnown RBP13.11□□□□□ -0.31
RAB5C-206ENST00000550406 MCCC1Q96RQ3 725 aaPredicted RBP13.11□□□□□ -0.31
RAB5C-206ENST00000550406 ORAI3Q9BRQ5 295 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 FICDQ9BVA6 458 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 KCNH6Q9H252 994 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 KDM4CQ9H3R0 1056 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 EBF2Q9HAK2 575 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 RAB6BQ9NRW1 208 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 B4GALT6Q9UBX8 382 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 RAPGEFL1Q9UHV5 662 aa13.11□□□□□ -0.31
RAB5C-206ENST00000550406 RPL26L1Q9UNX3 145 aaKnown RBP13.11□□□□□ -0.31
RAB5C-206ENST00000550406 AAR2Q9Y312 384 aaKnown RBP13.11□□□□□ -0.31
RAB5C-206ENST00000550406 ARIH1Q9Y4X5 557 aaPredicted RBP13.11□□□□□ -0.31
RAB5C-206ENST00000550406 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.1□□□□□ -0.31
RAB5C-206ENST00000550406 TBC1D3DA0A087WVF3 549 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 TBC1D3IA0A087WXS9 549 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 TBC1D3EA0A087X179 549 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 TBC1D3KA0A087X1G2 549 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 TCRBV7S3A2A0A539 114 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 TBC1D3FA6NER0 549 aaPredicted RBP13.1□□□□□ -0.31
RAB5C-206ENST00000550406 PRR23AA6NEV1 266 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 NPIPB15A6NHN6 443 aaPredicted RBP13.1□□□□□ -0.31
RAB5C-206ENST00000550406 FAM47DPA6NHR8 397 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 METTL12A8MUP2 240 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 TBC1D3LB9A6J9 549 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 TTI1O43156 1089 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 RNGTTO60942 597 aaKnown RBP13.1□□□□□ -0.31
RAB5C-206ENST00000550406 NDUFS2O75306 463 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 ECEL1O95672 775 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 AP2A1O95782 977 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 EPOP01588 193 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 TBC1D3HP0C7X1 549 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 LHCGRP22888 699 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 FDFT1P37268 417 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 GRIA1P42261 906 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 VPS41P49754 854 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 SUOXP51687 545 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 RPL6Q02878 288 aaKnown RBP13.1□□□□□ -0.31
RAB5C-206ENST00000550406 CCDC15Q0P6D6 951 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 GPS1Q13098 491 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 PTK6Q13882 451 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 TUBB2AQ13885 445 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 FGL2Q14314 439 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 PRPSAP1Q14558 356 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 SLC1A5Q15758 541 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 TMEM259Q4ZIN3 620 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 CFAP58Q5T655 872 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 SEL1L3Q68CR1 1132 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 PMS2CLQ68D20 193 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 TBC1D3GQ6DHY5 549 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 TBC1D3CQ6IPX1 549 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 C4orf22Q6V702 233 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms