RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 UGP2Q16851 508 aa21.07■□□□□ 0.96
PRDM4-205ENST00000550376 ATXN7L2Q5T6C5 722 aaPredicted RBP21.07■□□□□ 0.96
PRDM4-205ENST00000550376 FAM219BQ5XKK7 198 aa21.07■□□□□ 0.96
PRDM4-205ENST00000550376 FAM43BQ6ZT52 329 aaPredicted RBP21.07■□□□□ 0.96
PRDM4-205ENST00000550376 CILP2Q8IUL8 1156 aa21.07■□□□□ 0.96
PRDM4-205ENST00000550376 FIBCD1Q8N539 461 aa21.07■□□□□ 0.96
PRDM4-205ENST00000550376 UTP4Q969X6 686 aaKnown RBP21.07■□□□□ 0.96
PRDM4-205ENST00000550376 SCUBE2Q9NQ36 999 aa21.07■□□□□ 0.96
PRDM4-205ENST00000550376 REV3LO60673 3130 aa21.07■□□□□ 0.96
PRDM4-205ENST00000550376 SZT2Q5T011 3432 aa21.07■□□□□ 0.96
PRDM4-205ENST00000550376 INSIG1O15503 277 aa21.07■□□□□ 0.96
PRDM4-205ENST00000550376 GOT2P00505 430 aaKnown RBP21.07■□□□□ 0.96
PRDM4-205ENST00000550376 PRLP01236 227 aa21.07■□□□□ 0.96
PRDM4-205ENST00000550376 C8AP07357 584 aa21.07■□□□□ 0.96
PRDM4-205ENST00000550376 LBX1P52954 281 aa21.07■□□□□ 0.96
PRDM4-205ENST00000550376 CSHL1Q14406 222 aa21.07■□□□□ 0.96
PRDM4-205ENST00000550376 EML3Q32P44 896 aa21.07■□□□□ 0.96
PRDM4-205ENST00000550376 CCDC91Q7Z6B0 441 aa21.07■□□□□ 0.96
PRDM4-205ENST00000550376 PIM3Q86V86 326 aa21.07■□□□□ 0.96
PRDM4-205ENST00000550376 APCDD1Q8J025 514 aa21.07■□□□□ 0.96
PRDM4-205ENST00000550376 LPCAT1Q8NF37 534 aa21.07■□□□□ 0.96
PRDM4-205ENST00000550376 ARMC5Q96C12 935 aa21.07■□□□□ 0.96
PRDM4-205ENST00000550376 TRIB3Q96RU7 358 aa21.07■□□□□ 0.96
PRDM4-205ENST00000550376 FAM167BQ9BTA0 163 aa21.07■□□□□ 0.96
PRDM4-205ENST00000550376 ARHGEF3Q9NR81 526 aa21.07■□□□□ 0.96
PRDM4-205ENST00000550376 CFAP97Q9P2B7 532 aa21.07■□□□□ 0.96
PRDM4-205ENST00000550376 XPR1Q9UBH6 696 aa21.07■□□□□ 0.96
PRDM4-205ENST00000550376 CCDC162PA2VCL2 907 aa21.06■□□□□ 0.96
PRDM4-205ENST00000550376 NEMP2A6NFY4 417 aa21.06■□□□□ 0.96
PRDM4-205ENST00000550376 TMCC1O94876 653 aa21.06■□□□□ 0.96
PRDM4-205ENST00000550376 IL1BP01584 269 aa21.06■□□□□ 0.96
PRDM4-205ENST00000550376 CTSAP10619 480 aa21.06■□□□□ 0.96
PRDM4-205ENST00000550376 CSKP41240 450 aa21.06■□□□□ 0.96
PRDM4-205ENST00000550376 ABCE1P61221 599 aaKnown RBP21.06■□□□□ 0.96
PRDM4-205ENST00000550376 HERC6Q8IVU3 1022 aa21.06■□□□□ 0.96
PRDM4-205ENST00000550376 BBS7Q8IWZ6 715 aa21.06■□□□□ 0.96
PRDM4-205ENST00000550376 ZNF781Q8N8C0 355 aa21.06■□□□□ 0.96
PRDM4-205ENST00000550376 PIWIL2Q8TC59 973 aaKnown RBP21.06■□□□□ 0.96
PRDM4-205ENST00000550376 DDI1Q8WTU0 396 aa21.06■□□□□ 0.96
PRDM4-205ENST00000550376 HEXDCQ8WVB3 486 aa21.06■□□□□ 0.96
PRDM4-205ENST00000550376 FEM1CQ96JP0 617 aa21.06■□□□□ 0.96
PRDM4-205ENST00000550376 GPR78Q96P69 363 aa21.06■□□□□ 0.96
PRDM4-205ENST00000550376 FEM1AQ9BSK4 669 aa21.06■□□□□ 0.96
PRDM4-205ENST00000550376 GATA5Q9BWX5 397 aaPredicted RBP21.06■□□□□ 0.96
PRDM4-205ENST00000550376 ABL2P42684 1182 aa21.06■□□□□ 0.96
PRDM4-205ENST00000550376 CDKN2DP55273 166 aa21.06■□□□□ 0.96
PRDM4-205ENST00000550376 MDGA1Q8NFP4 955 aa21.06■□□□□ 0.96
PRDM4-205ENST00000550376 ZNF599Q96NL3 588 aa21.06■□□□□ 0.96
PRDM4-205ENST00000550376 TCF25Q9BQ70 676 aa21.06■□□□□ 0.96
PRDM4-205ENST00000550376 TM6SF2Q9BZW4 377 aa21.06■□□□□ 0.96
PRDM4-205ENST00000550376 BPIFA1Q9NP55 256 aa21.06■□□□□ 0.96
PRDM4-205ENST00000550376 IL23AQ9NPF7 189 aa21.06■□□□□ 0.96
PRDM4-205ENST00000550376 TXLNGQ9NUQ3 528 aa21.06■□□□□ 0.96
PRDM4-205ENST00000550376 KCNK4Q9NYG8 393 aa21.06■□□□□ 0.96
PRDM4-205ENST00000550376 LTBP2Q14767 1821 aa21.06■□□□□ 0.96
PRDM4-205ENST00000550376 SIN3BO75182 1162 aa21.05■□□□□ 0.96
PRDM4-205ENST00000550376 RFPL2O75678 378 aa21.05■□□□□ 0.96
PRDM4-205ENST00000550376 LRG1P02750 347 aa21.05■□□□□ 0.96
PRDM4-205ENST00000550376 GKP32189 559 aa21.05■□□□□ 0.96
PRDM4-205ENST00000550376 CCR2P41597 374 aa21.05■□□□□ 0.96
PRDM4-205ENST00000550376 NAGLUP54802 743 aa21.05■□□□□ 0.96
PRDM4-205ENST00000550376 SLC12A2P55011 1212 aa21.05■□□□□ 0.96
PRDM4-205ENST00000550376 PLPP4Q5VZY2 271 aa21.05■□□□□ 0.96
PRDM4-205ENST00000550376 SETD3Q86TU7 594 aaPredicted RBP21.05■□□□□ 0.96
PRDM4-205ENST00000550376 BBS5Q8N3I7 341 aa21.05■□□□□ 0.96
PRDM4-205ENST00000550376 EFHBQ8N7U6 833 aa21.05■□□□□ 0.96
PRDM4-205ENST00000550376 ANKRD49Q8WVL7 239 aa21.05■□□□□ 0.96
PRDM4-205ENST00000550376 RANBP9Q96S59 729 aa21.05■□□□□ 0.96
PRDM4-205ENST00000550376 MAN1C1Q9NR34 630 aa21.05■□□□□ 0.96
PRDM4-205ENST00000550376 S1PR4O95977 384 aa21.05■□□□□ 0.96
PRDM4-205ENST00000550376 DNAJB1P25685 340 aa21.05■□□□□ 0.96
PRDM4-205ENST00000550376 CDKN1CP49918 316 aaPredicted RBP21.05■□□□□ 0.96
PRDM4-205ENST00000550376 MTA1Q13330 715 aa21.05■□□□□ 0.96
PRDM4-205ENST00000550376 CDH18Q13634 790 aa21.05■□□□□ 0.96
PRDM4-205ENST00000550376 UBAP2LQ14157 1087 aaKnown RBP21.05■□□□□ 0.96
PRDM4-205ENST00000550376 RPS27LQ71UM5 84 aaKnown RBP21.05■□□□□ 0.96
PRDM4-205ENST00000550376 TREML1Q86YW5 311 aa21.05■□□□□ 0.96
PRDM4-205ENST00000550376 RAB3IL1Q8TBN0 382 aa21.05■□□□□ 0.96
PRDM4-205ENST00000550376 CCL26Q9Y258 94 aa21.05■□□□□ 0.96
PRDM4-205ENST00000550376 RAI2Q9Y5P3 530 aa21.05■□□□□ 0.96
PRDM4-205ENST00000550376 CHD5Q8TDI0 1954 aa21.05■□□□□ 0.96
PRDM4-205ENST00000550376 NDST3O95803 873 aa21.04■□□□□ 0.96
PRDM4-205ENST00000550376 FGBP02675 491 aa21.04■□□□□ 0.96
PRDM4-205ENST00000550376 FGF1P05230 155 aa21.04■□□□□ 0.96
PRDM4-205ENST00000550376 CR2P20023 1033 aa21.04■□□□□ 0.96
PRDM4-205ENST00000550376 HLA-DPA1P20036 260 aa21.04■□□□□ 0.96
PRDM4-205ENST00000550376 LRRC8EQ6NSJ5 796 aa21.04■□□□□ 0.96
PRDM4-205ENST00000550376 CHST9Q7L1S5 443 aa21.04■□□□□ 0.96
PRDM4-205ENST00000550376 TLE6Q9H808 572 aa21.04■□□□□ 0.96
PRDM4-205ENST00000550376 OXSMQ9NWU1 459 aa21.04■□□□□ 0.96
PRDM4-205ENST00000550376 SMAD6O43541 496 aaKnown RBP21.04■□□□□ 0.96
PRDM4-205ENST00000550376 TRIM13O60858 407 aa21.04■□□□□ 0.96
PRDM4-205ENST00000550376 HSPA4LO95757 839 aa21.04■□□□□ 0.96
PRDM4-205ENST00000550376 PPM1AP35813 382 aa21.04■□□□□ 0.96
PRDM4-205ENST00000550376 LEPRP48357 1165 aaKnown RBP21.04■□□□□ 0.96
PRDM4-205ENST00000550376 TMEM207Q6UWW9 146 aa21.04■□□□□ 0.96
PRDM4-205ENST00000550376 ITIH5Q86UX2 942 aa21.04■□□□□ 0.96
PRDM4-205ENST00000550376 TMC8Q8IU68 726 aa21.04■□□□□ 0.96
PRDM4-205ENST00000550376 PARP9Q8IXQ6 854 aa21.04■□□□□ 0.96
PRDM4-205ENST00000550376 KREMEN2Q8NCW0 462 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms