RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 SLC10A2Q12908 348 aaPredicted RBP4.94□□□□□ -1.62
SCAF11-212ENST00000549162 LRMPQ12912 555 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 MPP2Q14168 576 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 ARHGAP19Q14CB8 494 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 CYTH1Q15438 398 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 KLHL38Q2WGJ6 581 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 FAM209AQ5JX71 171 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 BSPRYQ5W0U4 402 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 PSAPL1Q6NUJ1 521 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 C6orf89Q6UWU4 347 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 KYAT3Q6YP21 454 aaKnown RBP4.94□□□□□ -1.62
SCAF11-212ENST00000549162 DENND5BQ6ZUT9 1274 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 CMTM8Q8IZV2 173 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 SLC2A14Q8TDB8 520 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 STYXQ8WUJ0 223 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 NLRP4Q96MN2 994 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 C7orf26Q96N11 449 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 MMS19Q96T76 1030 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 POP1Q99575 1024 aaKnown RBP4.94□□□□□ -1.62
SCAF11-212ENST00000549162 STMN4Q9H169 189 aaPredicted RBP4.94□□□□□ -1.62
SCAF11-212ENST00000549162 NMUR1Q9HB89 426 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 DMTF1Q9Y222 760 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 PCDHB1Q9Y5F3 818 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 CSNK1G3Q9Y6M4 447 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 A0A087X1B8 175 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 TMEM238LA0A1B0GVL6 79 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 ARHGAP42A6NI28 874 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 PLRG1O43660 514 aaKnown RBP4.93□□□□□ -1.62
SCAF11-212ENST00000549162 TOP3BO95985 862 aaKnown RBP4.93□□□□□ -1.62
SCAF11-212ENST00000549162 TNNT1P13805 278 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 TNNI1P19237 187 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 CETN2P41208 172 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 RNF219Q5W0B1 726 aaPredicted RBP4.93□□□□□ -1.62
SCAF11-212ENST00000549162 KIAA1161Q6NSJ0 714 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 NUP54Q7Z3B4 507 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 NET1Q7Z628 596 aaPredicted RBP4.93□□□□□ -1.62
SCAF11-212ENST00000549162 LRRC56Q8IYG6 542 aaPredicted RBP4.93□□□□□ -1.62
SCAF11-212ENST00000549162 KDF1Q8NAX2 398 aaPredicted RBP4.93□□□□□ -1.62
SCAF11-212ENST00000549162 PIH1D2Q8WWB5 315 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 PPP1R16AQ96I34 528 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 CCDC43Q96MW1 224 aaKnown RBP4.93□□□□□ -1.62
SCAF11-212ENST00000549162 EBNA1BP2Q99848 306 aaKnown RBP4.93□□□□□ -1.62
SCAF11-212ENST00000549162 TRMOQ9BU70 441 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 MLPHQ9BV36 600 aaPredicted RBP4.93□□□□□ -1.62
SCAF11-212ENST00000549162 TDRD1Q9BXT4 1180 aaKnown RBP4.93□□□□□ -1.62
SCAF11-212ENST00000549162 MUC3BQ9H195 1237 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 IKZF4Q9H2S9 585 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 EPB41L1Q9H4G0 881 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 ZWILCHQ9H900 591 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 ZNF334Q9HCZ1 680 aaPredicted RBP4.93□□□□□ -1.62
SCAF11-212ENST00000549162 KRT82Q9NSB4 513 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 ETNK2Q9NVF9 386 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 HCN2Q9UL51 889 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 PHTF1Q9UMS5 762 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 AP4E1Q9UPM8 1137 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 CTAGE15A4D2H0 777 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 PLD2O14939 933 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 RIPK2O43353 540 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 COCHO43405 550 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 SLITRK5O94991 958 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 ABCB1P08183 1280 aaPredicted RBP4.93□□□□□ -1.62
SCAF11-212ENST00000549162 CTAGE8P0CG41 777 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 CEBPZQ03701 1054 aaKnown RBP4.93□□□□□ -1.62
SCAF11-212ENST00000549162 GOLGA8FQ08AF8 430 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 GOLGA8DPQ0D2H9 430 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 RALGDSQ12967 914 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 GJB7Q6PEY0 223 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 PIGWQ7Z7B1 504 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 CTAGE6Q86UF2 777 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 CTAGE4Q8IX94 777 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 PDPRQ8NCN5 879 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 FAM156AQ8NDB6 213 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 PSMA8Q8TAA3 256 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 MAGEC3Q8TD91 643 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 CPNE1Q99829 537 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 FAM167BQ9BTA0 163 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 MYLK2Q9H1R3 596 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 VPS11Q9H270 941 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 ABI2Q9NYB9 513 aaPredicted RBP4.93□□□□□ -1.62
SCAF11-212ENST00000549162 PDP2Q9P2J9 529 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 GTF2A1LQ9UNN4 478 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 NR2E3Q9Y5X4 410 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 DGKBQ9Y6T7 804 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 TEX28O15482 410 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 TNFSF14O43557 240 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 WDR47O94967 919 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 PIGNO95427 931 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 CPP00450 1065 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 SRGAP2CP0DJJ0 459 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 CDK4P11802 303 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 CPEP16870 476 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 DRD1P21728 446 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 CA4P22748 312 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 FRKP42685 505 aaPredicted RBP4.93□□□□□ -1.62
SCAF11-212ENST00000549162 STC1P52823 247 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 LRRC74AQ0VAA2 488 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 PAN2Q504Q3 1202 aaKnown RBP4.93□□□□□ -1.62
SCAF11-212ENST00000549162 MANEAQ5SRI9 462 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 SPATA2LQ8IUW3 424 aaPredicted RBP4.93□□□□□ -1.62
SCAF11-212ENST00000549162 ITFG2Q969R8 447 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms