RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 TLE3Q04726 772 aa17.53■□□□□ 0.4
CHMP1A-205ENST00000548650 CCDC173Q0VFZ6 552 aa17.53■□□□□ 0.4
CHMP1A-205ENST00000548650 RALGDSQ12967 914 aa17.53■□□□□ 0.4
CHMP1A-205ENST00000548650 NFATC4Q14934 902 aa17.53■□□□□ 0.4
CHMP1A-205ENST00000548650 ALG11Q2TAA5 492 aa17.53■□□□□ 0.4
CHMP1A-205ENST00000548650 ERAP2Q6P179 960 aa17.53■□□□□ 0.4
CHMP1A-205ENST00000548650 CRTC1Q6UUV9 634 aa17.53■□□□□ 0.4
CHMP1A-205ENST00000548650 ARHGAP36Q6ZRI8 547 aa17.53■□□□□ 0.4
CHMP1A-205ENST00000548650 NYAP1Q6ZVC0 841 aa17.53■□□□□ 0.4
CHMP1A-205ENST00000548650 SPACA3Q8IXA5 215 aa17.53■□□□□ 0.4
CHMP1A-205ENST00000548650 ZNF653Q96CK0 615 aa17.53■□□□□ 0.4
CHMP1A-205ENST00000548650 ECHDC3Q96DC8 303 aa17.53■□□□□ 0.4
CHMP1A-205ENST00000548650 ZNF578Q96N58 590 aaPredicted RBP17.53■□□□□ 0.4
CHMP1A-205ENST00000548650 FCRL3Q96P31 734 aaPredicted RBP17.53■□□□□ 0.4
CHMP1A-205ENST00000548650 POLR1BQ9H9Y6 1135 aa17.53■□□□□ 0.4
CHMP1A-205ENST00000548650 ASCL3Q9NQ33 180 aa17.53■□□□□ 0.4
CHMP1A-205ENST00000548650 AIPL1Q9NZN9 384 aa17.53■□□□□ 0.4
CHMP1A-205ENST00000548650 CNOT8Q9UFF9 292 aaKnown RBP17.53■□□□□ 0.4
CHMP1A-205ENST00000548650 A0A1B0GTH6 734 aa17.52■□□□□ 0.4
CHMP1A-205ENST00000548650 CASC3O15234 703 aaKnown RBP17.52■□□□□ 0.4
CHMP1A-205ENST00000548650 YY2O15391 372 aa17.52■□□□□ 0.4
CHMP1A-205ENST00000548650 ANXA6P08133 673 aa17.52■□□□□ 0.4
CHMP1A-205ENST00000548650 GZMAP12544 262 aa17.52■□□□□ 0.4
CHMP1A-205ENST00000548650 SERPINA4P29622 427 aa17.52■□□□□ 0.4
CHMP1A-205ENST00000548650 LSSP48449 732 aa17.52■□□□□ 0.4
CHMP1A-205ENST00000548650 LIG3P49916 1009 aa17.52■□□□□ 0.4
CHMP1A-205ENST00000548650 PEX5P50542 639 aa17.52■□□□□ 0.4
CHMP1A-205ENST00000548650 HK3P52790 923 aa17.52■□□□□ 0.4
CHMP1A-205ENST00000548650 PDX1P52945 283 aa17.52■□□□□ 0.4
CHMP1A-205ENST00000548650 PCBP4P57723 403 aaKnown RBP17.52■□□□□ 0.4
CHMP1A-205ENST00000548650 DPYSQ14117 519 aa17.52■□□□□ 0.4
CHMP1A-205ENST00000548650 PPP6R3Q5H9R7 873 aaPredicted RBP17.52■□□□□ 0.4
CHMP1A-205ENST00000548650 CFAP58Q5T655 872 aa17.52■□□□□ 0.4
CHMP1A-205ENST00000548650 FAXCQ5TGI0 409 aa17.52■□□□□ 0.4
CHMP1A-205ENST00000548650 KCTD16Q68DU8 428 aa17.52■□□□□ 0.4
CHMP1A-205ENST00000548650 SRLQ86TD4 932 aa17.52■□□□□ 0.4
CHMP1A-205ENST00000548650 PSTKQ8IV42 348 aaKnown RBP17.52■□□□□ 0.4
CHMP1A-205ENST00000548650 FSTL5Q8N475 847 aaPredicted RBP17.52■□□□□ 0.4
CHMP1A-205ENST00000548650 KYQ8NBH2 561 aa17.52■□□□□ 0.4
CHMP1A-205ENST00000548650 PCDH19Q8TAB3 1148 aa17.52■□□□□ 0.4
CHMP1A-205ENST00000548650 NAT6Q93015 286 aa17.52■□□□□ 0.4
CHMP1A-205ENST00000548650 UBL7Q96S82 380 aaPredicted RBP17.52■□□□□ 0.4
CHMP1A-205ENST00000548650 ATP13A3Q9H7F0 1226 aa17.52■□□□□ 0.4
CHMP1A-205ENST00000548650 SP110Q9HB58 689 aa17.52■□□□□ 0.4
CHMP1A-205ENST00000548650 DFFAO00273 331 aa17.51■□□□□ 0.39
CHMP1A-205ENST00000548650 PRPSAP2O60256 369 aa17.51■□□□□ 0.39
CHMP1A-205ENST00000548650 TCEA3O75764 348 aa17.51■□□□□ 0.39
CHMP1A-205ENST00000548650 PALMO75781 387 aa17.51■□□□□ 0.39
CHMP1A-205ENST00000548650 RNF8O76064 485 aa17.51■□□□□ 0.39
CHMP1A-205ENST00000548650 FTLP02792 175 aaPredicted RBP17.51■□□□□ 0.39
CHMP1A-205ENST00000548650 PCCBP05166 539 aa17.51■□□□□ 0.39
CHMP1A-205ENST00000548650 RPIAP49247 311 aa17.51■□□□□ 0.39
CHMP1A-205ENST00000548650 IL10RBQ08334 325 aa17.51■□□□□ 0.39
CHMP1A-205ENST00000548650 INPP5AQ14642 412 aa17.51■□□□□ 0.39
CHMP1A-205ENST00000548650 IGF2-ASQ6U949 168 aa17.51■□□□□ 0.39
CHMP1A-205ENST00000548650 RBM44Q6ZP01 1051 aaKnown RBP17.51■□□□□ 0.39
CHMP1A-205ENST00000548650 TP53INP2Q8IXH6 220 aa17.51■□□□□ 0.39
CHMP1A-205ENST00000548650 LSMEM2Q8N112 164 aa17.51■□□□□ 0.39
CHMP1A-205ENST00000548650 ZNF248Q8NDW4 579 aa17.51■□□□□ 0.39
CHMP1A-205ENST00000548650 GLMNQ92990 594 aa17.51■□□□□ 0.39
CHMP1A-205ENST00000548650 PDXPQ96GD0 296 aa17.51■□□□□ 0.39
CHMP1A-205ENST00000548650 ATXN7L3BQ96GX2 97 aa17.51■□□□□ 0.39
CHMP1A-205ENST00000548650 NSMCE3Q96MG7 304 aa17.51■□□□□ 0.39
CHMP1A-205ENST00000548650 NAP1L5Q96NT1 182 aaPredicted RBP17.51■□□□□ 0.39
CHMP1A-205ENST00000548650 LGMNQ99538 433 aa17.51■□□□□ 0.39
CHMP1A-205ENST00000548650 CINPQ9BW66 212 aaPredicted RBP17.51■□□□□ 0.39
CHMP1A-205ENST00000548650 CWC15Q9P013 229 aaKnown RBP17.51■□□□□ 0.39
CHMP1A-205ENST00000548650 SATB2Q9UPW6 733 aa17.51■□□□□ 0.39
CHMP1A-205ENST00000548650 OR1A2Q9Y585 309 aa17.51■□□□□ 0.39
CHMP1A-205ENST00000548650 ENTPD2Q9Y5L3 495 aa17.51■□□□□ 0.39
CHMP1A-205ENST00000548650 SCINQ9Y6U3 715 aa17.51■□□□□ 0.39
CHMP1A-205ENST00000548650 GCN1Q92616 2671 aaKnown RBP17.5■□□□□ 0.39
CHMP1A-205ENST00000548650 TMEM110-MUSTN1A8MSY1 372 aa17.5■□□□□ 0.39
CHMP1A-205ENST00000548650 SMTNL1A8MU46 457 aa17.5■□□□□ 0.39
CHMP1A-205ENST00000548650 DAPK3O43293 454 aa17.5■□□□□ 0.39
CHMP1A-205ENST00000548650 RASGRP1O95267 797 aa17.5■□□□□ 0.39
CHMP1A-205ENST00000548650 GM2AP17900 193 aa17.5■□□□□ 0.39
CHMP1A-205ENST00000548650 IL1R2P27930 398 aa17.5■□□□□ 0.39
CHMP1A-205ENST00000548650 HCAR3P49019 387 aa17.5■□□□□ 0.39
CHMP1A-205ENST00000548650 BLKP51451 505 aa17.5■□□□□ 0.39
CHMP1A-205ENST00000548650 ZNF135P52742 658 aaPredicted RBP17.5■□□□□ 0.39
CHMP1A-205ENST00000548650 ERVPABLB-1P60509 514 aa17.5■□□□□ 0.39
CHMP1A-205ENST00000548650 KLHL30Q0D2K2 578 aa17.5■□□□□ 0.39
CHMP1A-205ENST00000548650 MTM1Q13496 603 aa17.5■□□□□ 0.39
CHMP1A-205ENST00000548650 RFTN1Q14699 578 aaPredicted RBP17.5■□□□□ 0.39
CHMP1A-205ENST00000548650 ELOCQ15369 112 aa17.5■□□□□ 0.39
CHMP1A-205ENST00000548650 TCEA2Q15560 299 aa17.5■□□□□ 0.39
CHMP1A-205ENST00000548650 FILIP1LQ4L180 1135 aa17.5■□□□□ 0.39
CHMP1A-205ENST00000548650 C3orf38Q5JPI3 329 aa17.5■□□□□ 0.39
CHMP1A-205ENST00000548650 HID1Q8IV36 788 aa17.5■□□□□ 0.39
CHMP1A-205ENST00000548650 ARL10Q8N8L6 244 aa17.5■□□□□ 0.39
CHMP1A-205ENST00000548650 PLA2G15Q8NCC3 412 aa17.5■□□□□ 0.39
CHMP1A-205ENST00000548650 TPCN2Q8NHX9 752 aa17.5■□□□□ 0.39
CHMP1A-205ENST00000548650 TSACCQ96A04 125 aaPredicted RBP17.5■□□□□ 0.39
CHMP1A-205ENST00000548650 TRIM11Q96F44 468 aa17.5■□□□□ 0.39
CHMP1A-205ENST00000548650 CCDC3Q9BQI4 270 aa17.5■□□□□ 0.39
CHMP1A-205ENST00000548650 APOOQ9BUR5 198 aa17.5■□□□□ 0.39
CHMP1A-205ENST00000548650 EDEM3Q9BZQ6 932 aa17.5■□□□□ 0.39
CHMP1A-205ENST00000548650 PMS2P1A4D2B8 440 aa17.49■□□□□ 0.39
CHMP1A-205ENST00000548650 CFAP69A5D8W1 941 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms