RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 HALP42357 657 aa14.29□□□□□ -0.12
SRP54-202ENST00000546080 SLC26A2P50443 739 aa14.29□□□□□ -0.12
SRP54-202ENST00000546080 BMXP51813 675 aa14.29□□□□□ -0.12
SRP54-202ENST00000546080 TAS2R39P59534 338 aa14.29□□□□□ -0.12
SRP54-202ENST00000546080 NFATC3Q12968 1075 aa14.29□□□□□ -0.12
SRP54-202ENST00000546080 CSHL1Q14406 222 aa14.29□□□□□ -0.12
SRP54-202ENST00000546080 TMTC4Q5T4D3 741 aa14.29□□□□□ -0.12
SRP54-202ENST00000546080 FAM72AQ5TYM5 149 aa14.29□□□□□ -0.12
SRP54-202ENST00000546080 FAM72DQ6L9T8 149 aa14.29□□□□□ -0.12
SRP54-202ENST00000546080 RPS27LQ71UM5 84 aaKnown RBP14.29□□□□□ -0.12
SRP54-202ENST00000546080 LINC00523Q86TU6 105 aa14.29□□□□□ -0.12
SRP54-202ENST00000546080 FAM72BQ86X60 149 aa14.29□□□□□ -0.12
SRP54-202ENST00000546080 CNTN4Q8IWV2 1026 aa14.29□□□□□ -0.12
SRP54-202ENST00000546080 DHRSXQ8N5I4 330 aa14.29□□□□□ -0.12
SRP54-202ENST00000546080 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.29□□□□□ -0.12
SRP54-202ENST00000546080 FBXL8Q96CD0 374 aa14.29□□□□□ -0.12
SRP54-202ENST00000546080 HDAC11Q96DB2 347 aa14.29□□□□□ -0.12
SRP54-202ENST00000546080 CCDC126Q96EE4 140 aa14.29□□□□□ -0.12
SRP54-202ENST00000546080 FEM1CQ96JP0 617 aa14.29□□□□□ -0.12
SRP54-202ENST00000546080 NPY6RQ99463 290 aa14.29□□□□□ -0.12
SRP54-202ENST00000546080 CDHR5Q9HBB8 845 aa14.29□□□□□ -0.12
SRP54-202ENST00000546080 C8orf4Q9NR00 106 aa14.29□□□□□ -0.12
SRP54-202ENST00000546080 TBC1D13Q9NVG8 400 aa14.29□□□□□ -0.12
SRP54-202ENST00000546080 GID8Q9NWU2 228 aa14.29□□□□□ -0.12
SRP54-202ENST00000546080 TRNAU1APQ9NX07 287 aaKnown RBP14.29□□□□□ -0.12
SRP54-202ENST00000546080 EGFL7Q9UHF1 273 aa14.29□□□□□ -0.12
SRP54-202ENST00000546080 TRIM64BA6NI03 449 aa14.28□□□□□ -0.12
SRP54-202ENST00000546080 A8MT66 165 aa14.28□□□□□ -0.12
SRP54-202ENST00000546080 CFAP99D6REC4 459 aa14.28□□□□□ -0.12
SRP54-202ENST00000546080 NR5A2O00482 541 aa14.28□□□□□ -0.12
SRP54-202ENST00000546080 EI24O14681 340 aa14.28□□□□□ -0.12
SRP54-202ENST00000546080 CCNA2P20248 432 aa14.28□□□□□ -0.12
SRP54-202ENST00000546080 CCT8P50990 548 aa14.28□□□□□ -0.12
SRP54-202ENST00000546080 ATP4BP51164 291 aa14.28□□□□□ -0.12
SRP54-202ENST00000546080 BNIP2Q12982 314 aa14.28□□□□□ -0.12
SRP54-202ENST00000546080 BTG3Q14201 252 aaPredicted RBP14.28□□□□□ -0.12
SRP54-202ENST00000546080 RGS21Q2M5E4 152 aa14.28□□□□□ -0.12
SRP54-202ENST00000546080 KIF19Q2TAC6 998 aa14.28□□□□□ -0.12
SRP54-202ENST00000546080 PCID2Q5JVF3 399 aa14.28□□□□□ -0.12
SRP54-202ENST00000546080 PRMT9Q6P2P2 845 aa14.28□□□□□ -0.12
SRP54-202ENST00000546080 PKN3Q6P5Z2 889 aa14.28□□□□□ -0.12
SRP54-202ENST00000546080 SPRED1Q7Z699 444 aa14.28□□□□□ -0.12
SRP54-202ENST00000546080 RNF135Q8IUD6 432 aa14.28□□□□□ -0.12
SRP54-202ENST00000546080 CMTR2Q8IYT2 770 aaKnown RBP14.28□□□□□ -0.12
SRP54-202ENST00000546080 ANKRD13AQ8IZ07 590 aa14.28□□□□□ -0.12
SRP54-202ENST00000546080 NPWQ8N729 165 aa14.28□□□□□ -0.12
SRP54-202ENST00000546080 TANKQ92844 425 aa14.28□□□□□ -0.12
SRP54-202ENST00000546080 HNRNPABQ99729 332 aaKnown RBP14.28□□□□□ -0.12
SRP54-202ENST00000546080 NEURL2Q9BR09 285 aa14.28□□□□□ -0.12
SRP54-202ENST00000546080 BRD8Q9H0E9 1235 aa14.28□□□□□ -0.12
SRP54-202ENST00000546080 ARMC7Q9H6L4 198 aa14.28□□□□□ -0.12
SRP54-202ENST00000546080 CHST12Q9NRB3 414 aa14.28□□□□□ -0.12
SRP54-202ENST00000546080 PIGVQ9NUD9 493 aa14.28□□□□□ -0.12
SRP54-202ENST00000546080 ADAM23O75077 832 aa14.27□□□□□ -0.12
SRP54-202ENST00000546080 IPO13O94829 963 aaKnown RBP14.27□□□□□ -0.12
SRP54-202ENST00000546080 VTNP04004 478 aa14.27□□□□□ -0.12
SRP54-202ENST00000546080 ZNF182P17025 639 aaPredicted RBP14.27□□□□□ -0.12
SRP54-202ENST00000546080 SLC1A2P43004 574 aa14.27□□□□□ -0.12
SRP54-202ENST00000546080 CD151P48509 253 aa14.27□□□□□ -0.12
SRP54-202ENST00000546080 PLK1P53350 603 aa14.27□□□□□ -0.12
SRP54-202ENST00000546080 MAPK10P53779 464 aa14.27□□□□□ -0.12
SRP54-202ENST00000546080 GALNT2Q10471 571 aa14.27□□□□□ -0.12
SRP54-202ENST00000546080 POU6F1Q14863 301 aa14.27□□□□□ -0.12
SRP54-202ENST00000546080 FAM83EQ2M2I3 478 aa14.27□□□□□ -0.12
SRP54-202ENST00000546080 TECRLQ5HYJ1 363 aa14.27□□□□□ -0.12
SRP54-202ENST00000546080 LCN8Q6JVE9 175 aa14.27□□□□□ -0.12
SRP54-202ENST00000546080 ZBTB46Q86UZ6 589 aa14.27□□□□□ -0.12
SRP54-202ENST00000546080 RETREG3Q86VR2 466 aa14.27□□□□□ -0.12
SRP54-202ENST00000546080 TRUB1Q8WWH5 349 aaKnown RBP14.27□□□□□ -0.12
SRP54-202ENST00000546080 WNT8BQ93098 351 aa14.27□□□□□ -0.12
SRP54-202ENST00000546080 ACDQ96AP0 544 aa14.27□□□□□ -0.12
SRP54-202ENST00000546080 ITPKCQ96DU7 683 aa14.27□□□□□ -0.12
SRP54-202ENST00000546080 LRCH3Q96II8 777 aa14.27□□□□□ -0.12
SRP54-202ENST00000546080 PPP1R10Q96QC0 940 aaKnown RBP14.27□□□□□ -0.12
SRP54-202ENST00000546080 VAT1Q99536 393 aa14.27□□□□□ -0.12
SRP54-202ENST00000546080 HOPXQ9BPY8 73 aaPredicted RBP14.27□□□□□ -0.12
SRP54-202ENST00000546080 TUBA1CQ9BQE3 449 aa14.27□□□□□ -0.12
SRP54-202ENST00000546080 CXCL16Q9H2A7 254 aa14.27□□□□□ -0.12
SRP54-202ENST00000546080 MRM3Q9HC36 420 aaKnown RBP14.27□□□□□ -0.12
SRP54-202ENST00000546080 SMPD3Q9NY59 655 aaPredicted RBP14.27□□□□□ -0.12
SRP54-202ENST00000546080 SRCAPQ6ZRS2 3230 aa14.27□□□□□ -0.12
SRP54-202ENST00000546080 ATP6AP2A0A1C7CYW4 349 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 PSMD3O43242 534 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 TSPAN1O60635 241 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 ATP6AP2O75787 350 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 SULT1C4O75897 302 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 JCHAINP01591 159 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 FCGR1AP12314 374 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 KCNA5P22460 613 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 LMO2P25791 158 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 GNL1P36915 607 aaPredicted RBP14.27□□□□□ -0.13
SRP54-202ENST00000546080 GRM5P41594 1212 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 GRSF1Q12849 480 aaKnown RBP eCLIP14.27□□□□□ -0.13
SRP54-202ENST00000546080 FAM117BQ6P1L5 589 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 BNIPLQ7Z465 357 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 PIGZQ86VD9 579 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 IFNLR1Q8IU57 520 aaPredicted RBP14.27□□□□□ -0.13
SRP54-202ENST00000546080 FUNDC1Q8IVP5 155 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 ZC3H7AQ8IWR0 971 aaKnown RBP14.27□□□□□ -0.13
SRP54-202ENST00000546080 SLC15A4Q8N697 577 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms