RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 ZDHHC6Q9H6R6 413 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 HPS4Q9NQG7 708 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 STXBP5LQ9Y2K9 1186 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 ANKDD1BA6NHY2 528 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 GSC2O15499 205 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 PEX11AO75192 247 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 ASGR1P07306 291 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 PAX7P23759 505 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 CCNCP24863 283 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 ADARP55265 1226 aaKnown RBP12.59□□□□□ -0.39
COL4A6-209ENST00000545689 WNT3AP56704 352 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 FGD2Q7Z6J4 655 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 ELMO1Q92556 727 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 RNFT2Q96EX2 444 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 FAM105AQ9NUU6 356 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 CRNNQ9UBG3 495 aaPredicted RBP12.59□□□□□ -0.39
COL4A6-209ENST00000545689 AGO1Q9UL18 857 aaKnown RBP12.59□□□□□ -0.39
COL4A6-209ENST00000545689 VPS4AQ9UN37 437 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 PSMD13Q9UNM6 376 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 HES2Q9Y543 173 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 DHRS12A0PJE2 317 aa12.58□□□□□ -0.39
COL4A6-209ENST00000545689 HIRAP54198 1017 aaPredicted RBP12.58□□□□□ -0.39
COL4A6-209ENST00000545689 SPIRE1Q08AE8 756 aa12.58□□□□□ -0.39
COL4A6-209ENST00000545689 RSBN1Q5VWQ0 802 aaPredicted RBP12.58□□□□□ -0.39
COL4A6-209ENST00000545689 VSTM1Q6UX27 236 aa12.58□□□□□ -0.39
COL4A6-209ENST00000545689 DNAJC14Q6Y2X3 702 aaPredicted RBP12.58□□□□□ -0.39
COL4A6-209ENST00000545689 ZNF655Q8N720 491 aaPredicted RBP12.58□□□□□ -0.39
COL4A6-209ENST00000545689 C12orf29Q8N999 325 aa12.58□□□□□ -0.39
COL4A6-209ENST00000545689 MAGEE2Q8TD90 523 aaPredicted RBP12.58□□□□□ -0.39
COL4A6-209ENST00000545689 FAIM2Q9BWQ8 316 aa12.58□□□□□ -0.39
COL4A6-209ENST00000545689 C6orf62Q9GZU0 229 aaPredicted RBP12.58□□□□□ -0.39
COL4A6-209ENST00000545689 COQ4Q9Y3A0 265 aa12.58□□□□□ -0.39
COL4A6-209ENST00000545689 PCDHB1Q9Y5F3 818 aa12.58□□□□□ -0.39
COL4A6-209ENST00000545689 AVILO75366 819 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 MMP3P08254 477 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 UQCRBP14927 111 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 NRF1Q16656 503 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 USP41Q3LFD5 358 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 MAP1SQ66K74 1059 aaPredicted RBP12.58□□□□□ -0.4
COL4A6-209ENST00000545689 BHLHB9Q6PI77 547 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 ZYG11AQ6WRX3 759 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 PAGE2Q7Z2X7 111 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 EPHX4Q8IUS5 362 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 NDNQ99608 321 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 SYNDIG1Q9H7V2 258 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 ARL8BQ9NVJ2 186 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 DDX18Q9NVP1 670 aaKnown RBP12.58□□□□□ -0.4
COL4A6-209ENST00000545689 TCEA3O75764 348 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 RPP40O75818 363 aaKnown RBP12.58□□□□□ -0.4
COL4A6-209ENST00000545689 TM7SF2O76062 418 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 AP2A1O95782 977 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 TSPAN19P0C672 248 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 TUSC3Q13454 348 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 FNDC3BQ53EP0 1204 aaKnown RBP12.58□□□□□ -0.4
COL4A6-209ENST00000545689 CUZD1Q86UP6 607 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 NIPA2Q8N8Q9 360 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 FBXO30Q8TB52 745 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 PDZD7Q9H5P4 517 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 SIX2Q9NPC8 291 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 RSL24D1Q9UHA3 163 aaKnown RBP12.58□□□□□ -0.4
COL4A6-209ENST00000545689 MFHAS1Q9Y4C4 1052 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 H3BN98 237 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 FOLH1Q04609 750 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 COX10Q12887 443 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 BTN2A3PQ96KV6 586 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 FCRL2Q96LA5 508 aaPredicted RBP12.58□□□□□ -0.4
COL4A6-209ENST00000545689 S100A14Q9HCY8 104 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 CNTNAP1P78357 1384 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 SLC22A2O15244 555 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 JAK1P23458 1154 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 TAB1Q15750 504 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 NPY5RQ15761 445 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 TBC1D21Q8IYX1 336 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 ZNF614Q8N883 585 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 MARK4Q96L34 752 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 DCUN1D5Q9BTE7 237 aa12.58□□□□□ -0.4
COL4A6-209ENST00000545689 CLK4Q9HAZ1 481 aaKnown RBP12.58□□□□□ -0.4
COL4A6-209ENST00000545689 TDRKHQ9Y2W6 561 aaKnown RBP12.58□□□□□ -0.4
COL4A6-209ENST00000545689 PAPSS1O43252 624 aaPredicted RBP12.57□□□□□ -0.4
COL4A6-209ENST00000545689 FGF19O95750 216 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 FNBP1LQ5T0N5 605 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 KIAA0408Q6ZU52 694 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 EIF3MQ7L2H7 374 aaKnown RBP12.57□□□□□ -0.4
COL4A6-209ENST00000545689 CHMP1BQ7LBR1 199 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 ANKRD23Q86SG2 305 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 CNTD1Q8N815 330 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 SPPL2BQ8TCT7 592 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 SLCO2A1Q92959 643 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 TRIM63Q969Q1 353 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 NTPCRQ9BSD7 190 aaKnown RBP12.57□□□□□ -0.4
COL4A6-209ENST00000545689 TBCDQ9BTW9 1192 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 PNPOQ9NVS9 261 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 ITGB1BP2Q9UKP3 347 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 TRAF6Q9Y4K3 522 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 PAGE1O75459 146 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 LYPLA1O75608 230 aaPredicted RBP12.57□□□□□ -0.4
COL4A6-209ENST00000545689 ABL2P42684 1182 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 GUCA1AP43080 201 aaPredicted RBP12.57□□□□□ -0.4
COL4A6-209ENST00000545689 KBTBD8Q8NFY9 601 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 WDR36Q8NI36 951 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms