RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 ERGIC1Q969X5 290 aa4.78□□□□□ -1.64
SNHG1-224ENST00000545688 COG8Q96MW5 612 aa4.78□□□□□ -1.64
SNHG1-224ENST00000545688 TUBA1CQ9BQE3 449 aa4.78□□□□□ -1.64
SNHG1-224ENST00000545688 EPHX3Q9H6B9 360 aa4.78□□□□□ -1.64
SNHG1-224ENST00000545688 EVA1AQ9H8M9 152 aa4.78□□□□□ -1.64
SNHG1-224ENST00000545688 UBTD1Q9HAC8 227 aa4.78□□□□□ -1.64
SNHG1-224ENST00000545688 PCDHGB5Q9Y5G0 923 aa4.78□□□□□ -1.64
SNHG1-224ENST00000545688 IGHV4OR15-8A0A075B7B6 117 aa4.77□□□□□ -1.65
SNHG1-224ENST00000545688 ARHGAP10A1A4S6 786 aa4.77□□□□□ -1.65
SNHG1-224ENST00000545688 VWA3AA6NCI4 1184 aa4.77□□□□□ -1.65
SNHG1-224ENST00000545688 PABPN1LA6NDY0 278 aaKnown RBP4.77□□□□□ -1.65
SNHG1-224ENST00000545688 PRR23AA6NEV1 266 aa4.77□□□□□ -1.65
SNHG1-224ENST00000545688 SH2D7A6NKC9 451 aaPredicted RBP4.77□□□□□ -1.65
SNHG1-224ENST00000545688 HSPB2A8KAH6 182 aa4.77□□□□□ -1.65
SNHG1-224ENST00000545688 WNT9BO14905 357 aa4.77□□□□□ -1.65
SNHG1-224ENST00000545688 KLK10O43240 276 aa4.77□□□□□ -1.65
SNHG1-224ENST00000545688 ZIC3O60481 467 aa4.77□□□□□ -1.65
SNHG1-224ENST00000545688 LMX1BO60663 402 aa4.77□□□□□ -1.65
SNHG1-224ENST00000545688 LINC00271P0C7V0 271 aa4.77□□□□□ -1.65
SNHG1-224ENST00000545688 ZNF8P17098 575 aaPredicted RBP4.77□□□□□ -1.65
SNHG1-224ENST00000545688 DGKAP23743 735 aa4.77□□□□□ -1.65
SNHG1-224ENST00000545688 BLKP51451 505 aa4.77□□□□□ -1.65
SNHG1-224ENST00000545688 ARHGEF6Q15052 776 aa4.77□□□□□ -1.65
SNHG1-224ENST00000545688 HSPB2Q16082 182 aa4.77□□□□□ -1.65
SNHG1-224ENST00000545688 SOWAHAQ2M3V2 549 aa4.77□□□□□ -1.65
SNHG1-224ENST00000545688 STPG1Q5TH74 334 aa4.77□□□□□ -1.65
SNHG1-224ENST00000545688 ANO1Q5XXA6 986 aa4.77□□□□□ -1.65
SNHG1-224ENST00000545688 C17orf99Q6UX52 265 aa4.77□□□□□ -1.65
SNHG1-224ENST00000545688 NOL8Q76FK4 1167 aaKnown RBP4.77□□□□□ -1.65
SNHG1-224ENST00000545688 PARP16Q8N5Y8 322 aa4.77□□□□□ -1.65
SNHG1-224ENST00000545688 ZNF441Q8N8Z8 693 aa4.77□□□□□ -1.65
SNHG1-224ENST00000545688 CREB3L4Q8TEY5 395 aa4.77□□□□□ -1.65
SNHG1-224ENST00000545688 CD101Q93033 1021 aa4.77□□□□□ -1.65
SNHG1-224ENST00000545688 OTULINQ96BN8 352 aa4.77□□□□□ -1.65
SNHG1-224ENST00000545688 NOD2Q9HC29 1040 aa4.77□□□□□ -1.65
SNHG1-224ENST00000545688 A0A0U1RQF3 1178 aa4.76□□□□□ -1.65
SNHG1-224ENST00000545688 KLRF2D3W0D1 207 aa4.76□□□□□ -1.65
SNHG1-224ENST00000545688 GRK6P43250 576 aa4.76□□□□□ -1.65
SNHG1-224ENST00000545688 NLRP5P59047 1200 aa4.76□□□□□ -1.65
SNHG1-224ENST00000545688 NAA25Q14CX7 972 aa4.76□□□□□ -1.65
SNHG1-224ENST00000545688 ANKRD1Q15327 319 aa4.76□□□□□ -1.65
SNHG1-224ENST00000545688 EFNB3Q15768 340 aa4.76□□□□□ -1.65
SNHG1-224ENST00000545688 PAPPA-AS1Q5QFB9 102 aa4.76□□□□□ -1.65
SNHG1-224ENST00000545688 C10orf62Q5T681 223 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-224ENST00000545688 DCUN1D3Q8IWE4 304 aa4.76□□□□□ -1.65
SNHG1-224ENST00000545688 LMNTD1Q8N9Z9 388 aa4.76□□□□□ -1.65
SNHG1-224ENST00000545688 GJC3Q8NFK1 279 aa4.76□□□□□ -1.65
SNHG1-224ENST00000545688 STAMQ92783 540 aa4.76□□□□□ -1.65
SNHG1-224ENST00000545688 C3orf30Q96M34 536 aa4.76□□□□□ -1.65
SNHG1-224ENST00000545688 EPYCQ99645 322 aa4.76□□□□□ -1.65
SNHG1-224ENST00000545688 EBF2Q9HAK2 575 aa4.76□□□□□ -1.65
SNHG1-224ENST00000545688 ZNF224Q9NZL3 707 aa4.76□□□□□ -1.65
SNHG1-224ENST00000545688 CDC14AQ9UNH5 594 aa4.76□□□□□ -1.65
SNHG1-224ENST00000545688 A3GALT2U3KPV4 340 aa4.76□□□□□ -1.65
SNHG1-224ENST00000545688 AQRO60306 1485 aaKnown RBP eCLIP4.75□□□□□ -1.653e-14■■■■■ 46.6
SNHG1-224ENST00000545688 IRAK2O43187 625 aa4.75□□□□□ -1.65
SNHG1-224ENST00000545688 PTPN2P17706 415 aa4.75□□□□□ -1.65
SNHG1-224ENST00000545688 ITGAXP20702 1163 aa4.75□□□□□ -1.65
SNHG1-224ENST00000545688 RHBDL3P58872 404 aa4.75□□□□□ -1.65
SNHG1-224ENST00000545688 ECT2LQ008S8 904 aa4.75□□□□□ -1.65
SNHG1-224ENST00000545688 ZNF155Q12901 538 aaPredicted RBP4.75□□□□□ -1.65
SNHG1-224ENST00000545688 ZBTB17Q13105 803 aa4.75□□□□□ -1.65
SNHG1-224ENST00000545688 TNFAIP1Q13829 316 aa4.75□□□□□ -1.65
SNHG1-224ENST00000545688 OASLQ15646 514 aaKnown RBP4.75□□□□□ -1.65
SNHG1-224ENST00000545688 AMZ1Q400G9 498 aa4.75□□□□□ -1.65
SNHG1-224ENST00000545688 TBC1D26Q86UD7 250 aa4.75□□□□□ -1.65
SNHG1-224ENST00000545688 CD180Q99467 661 aa4.75□□□□□ -1.65
SNHG1-224ENST00000545688 ALKBH4Q9NXW9 302 aa4.75□□□□□ -1.65
SNHG1-224ENST00000545688 CISD1Q9NZ45 108 aaKnown RBP4.75□□□□□ -1.65
SNHG1-224ENST00000545688 SIX4Q9UIU6 781 aa4.75□□□□□ -1.65
SNHG1-224ENST00000545688 CLASP1Q7Z460 1538 aa4.75□□□□□ -1.65
SNHG1-224ENST00000545688 TOPBP1Q92547 1522 aa4.75□□□□□ -1.65
SNHG1-224ENST00000545688 NTN3O00634 580 aaPredicted RBP4.74□□□□□ -1.65
SNHG1-224ENST00000545688 NDUFS7O75251 213 aa4.74□□□□□ -1.65
SNHG1-224ENST00000545688 NDUFB4O95168 129 aa4.74□□□□□ -1.65
SNHG1-224ENST00000545688 SLC2A4P14672 509 aa4.74□□□□□ -1.65
SNHG1-224ENST00000545688 PAPOLAP51003 745 aaKnown RBP4.74□□□□□ -1.65
SNHG1-224ENST00000545688 NR1H2P55055 460 aa4.74□□□□□ -1.65
SNHG1-224ENST00000545688 CLDN2P57739 230 aa4.74□□□□□ -1.65
SNHG1-224ENST00000545688 YWHAZP63104 245 aaKnown RBP4.74□□□□□ -1.65
SNHG1-224ENST00000545688 TROAPQ12815 778 aa4.74□□□□□ -1.65
SNHG1-224ENST00000545688 MAB21L3Q8N8X9 362 aa4.74□□□□□ -1.65
SNHG1-224ENST00000545688 USP38Q8NB14 1042 aa4.74□□□□□ -1.65
SNHG1-224ENST00000545688 SPATA22Q8NHS9 363 aa4.74□□□□□ -1.65
SNHG1-224ENST00000545688 SNAPC3Q92966 411 aa4.74□□□□□ -1.65
SNHG1-224ENST00000545688 TBC1D20Q96BZ9 403 aa4.74□□□□□ -1.65
SNHG1-224ENST00000545688 ZC3HAV1LQ96H79 300 aaKnown RBP4.74□□□□□ -1.65
SNHG1-224ENST00000545688 TWNKQ96RR1 684 aa4.74□□□□□ -1.65
SNHG1-224ENST00000545688 LRRC4Q9HBW1 653 aa4.74□□□□□ -1.65
SNHG1-224ENST00000545688 ITM2CQ9NQX7 267 aa4.74□□□□□ -1.65
SNHG1-224ENST00000545688 EIF4G3O43432 1585 aaKnown RBP4.74□□□□□ -1.65
SNHG1-224ENST00000545688 TARBP1Q13395 1621 aaKnown RBP4.73□□□□□ -1.65
SNHG1-224ENST00000545688 KLK8O60259 260 aa4.73□□□□□ -1.65
SNHG1-224ENST00000545688 EDN2P20800 178 aa4.73□□□□□ -1.65
SNHG1-224ENST00000545688 HNRNPH1P31943 449 aaKnown RBP4.73□□□□□ -1.65
SNHG1-224ENST00000545688 ZNF132P52740 706 aa4.73□□□□□ -1.65
SNHG1-224ENST00000545688 TBL3Q12788 808 aaKnown RBP4.73□□□□□ -1.65
SNHG1-224ENST00000545688 RBM39Q14498 530 aaKnown RBP4.73□□□□□ -1.65
SNHG1-224ENST00000545688 RBBP5Q15291 538 aaKnown RBP4.73□□□□□ -1.65
SNHG1-224ENST00000545688 MRGPRG-AS1Q2M3A8 158 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms