RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 TAPT1Q6NXT6 567 aa8.81□□□□□ -1
TDP1-204ENST00000545686 COLGALT2Q8IYK4 626 aa8.81□□□□□ -1
TDP1-204ENST00000545686 FAM47BQ8NA70 645 aa8.81□□□□□ -1
TDP1-204ENST00000545686 CALML6Q8TD86 181 aa8.81□□□□□ -1
TDP1-204ENST00000545686 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.81□□□□□ -1
TDP1-204ENST00000545686 TMIGD2Q96BF3 282 aa8.81□□□□□ -1
TDP1-204ENST00000545686 PPWD1Q96BP3 646 aaKnown RBP8.81□□□□□ -1
TDP1-204ENST00000545686 IL12RB2Q99665 862 aa8.81□□□□□ -1
TDP1-204ENST00000545686 OMDQ99983 421 aa8.81□□□□□ -1
TDP1-204ENST00000545686 HOPXQ9BPY8 73 aaPredicted RBP8.81□□□□□ -1
TDP1-204ENST00000545686 COLEC11Q9BWP8 271 aa8.81□□□□□ -1
TDP1-204ENST00000545686 MUC13Q9H3R2 512 aa8.81□□□□□ -1
TDP1-204ENST00000545686 CD320Q9NPF0 282 aa8.81□□□□□ -1
TDP1-204ENST00000545686 ENTPD7Q9NQZ7 604 aa8.81□□□□□ -1
TDP1-204ENST00000545686 DDIT4Q9NX09 232 aa8.81□□□□□ -1
TDP1-204ENST00000545686 RBPJLQ9UBG7 517 aa8.81□□□□□ -1
TDP1-204ENST00000545686 FBXO5Q9UKT4 447 aa8.81□□□□□ -1
TDP1-204ENST00000545686 BPTFQ12830 3046 aa8.8□□□□□ -1
TDP1-204ENST00000545686 hCG_2014768A0A024R1R8 64 aa8.8□□□□□ -1
TDP1-204ENST00000545686 ZNF839A8K0R7 811 aa8.8□□□□□ -1
TDP1-204ENST00000545686 CLDN5O00501 218 aa8.8□□□□□ -1
TDP1-204ENST00000545686 SOCS2O14508 198 aa8.8□□□□□ -1
TDP1-204ENST00000545686 CXCL11O14625 94 aa8.8□□□□□ -1
TDP1-204ENST00000545686 AKAP10O43572 662 aa8.8□□□□□ -1
TDP1-204ENST00000545686 LRIG2O94898 1065 aa8.8□□□□□ -1
TDP1-204ENST00000545686 LTA4HP09960 611 aaKnown RBP8.8□□□□□ -1
TDP1-204ENST00000545686 HSD17B1P14061 328 aa8.8□□□□□ -1
TDP1-204ENST00000545686 HNRNPLP14866 589 aaKnown RBP eCLIP8.8□□□□□ -1
TDP1-204ENST00000545686 HTR7P34969 479 aa8.8□□□□□ -1
TDP1-204ENST00000545686 ADRA1AP35348 466 aa8.8□□□□□ -1
TDP1-204ENST00000545686 SLC26A3P40879 764 aa8.8□□□□□ -1
TDP1-204ENST00000545686 IREB2P48200 963 aaKnown RBP8.8□□□□□ -1
TDP1-204ENST00000545686 SLC7A2P52569 658 aa8.8□□□□□ -1
TDP1-204ENST00000545686 LILRA4P59901 499 aa8.8□□□□□ -1
TDP1-204ENST00000545686 NFKB2Q00653 900 aa8.8□□□□□ -1
TDP1-204ENST00000545686 PRKCQQ04759 706 aa8.8□□□□□ -1
TDP1-204ENST00000545686 FOXM1Q08050 763 aa8.8□□□□□ -1
TDP1-204ENST00000545686 POU6F1Q14863 301 aa8.8□□□□□ -1
TDP1-204ENST00000545686 ACAP2Q15057 778 aa8.8□□□□□ -1
TDP1-204ENST00000545686 RAB41Q5JT25 222 aa8.8□□□□□ -1
TDP1-204ENST00000545686 BTBD8Q5XKL5 378 aa8.8□□□□□ -1
TDP1-204ENST00000545686 ZNF470Q6ECI4 717 aa8.8□□□□□ -1
TDP1-204ENST00000545686 DENND5AQ6IQ26 1287 aa8.8□□□□□ -1
TDP1-204ENST00000545686 LCN8Q6JVE9 175 aa8.8□□□□□ -1
TDP1-204ENST00000545686 ESRP1Q6NXG1 681 aaKnown RBP8.8□□□□□ -1
TDP1-204ENST00000545686 Q6ZNX1 250 aa8.8□□□□□ -1
TDP1-204ENST00000545686 LARP4Q71RC2 724 aaKnown RBP eCLIP8.8□□□□□ -1
TDP1-204ENST00000545686 PTAR1Q7Z6K3 402 aaPredicted RBP8.8□□□□□ -1
TDP1-204ENST00000545686 ZNF354CQ86Y25 554 aa8.8□□□□□ -1
TDP1-204ENST00000545686 LZTR1Q8N653 840 aa8.8□□□□□ -1
TDP1-204ENST00000545686 SMYD1Q8NB12 490 aa8.8□□□□□ -1
TDP1-204ENST00000545686 L3HYPDHQ96EM0 354 aa8.8□□□□□ -1
TDP1-204ENST00000545686 PLEKHG4BQ96PX9 1271 aa8.8□□□□□ -1
TDP1-204ENST00000545686 DOK1Q99704 481 aa8.8□□□□□ -1
TDP1-204ENST00000545686 GPATCH1Q9BRR8 931 aaKnown RBP8.8□□□□□ -1
TDP1-204ENST00000545686 MED10Q9BTT4 135 aa8.8□□□□□ -1
TDP1-204ENST00000545686 C9orf16Q9BUW7 83 aa8.8□□□□□ -1
TDP1-204ENST00000545686 HIPK3Q9H422 1215 aa8.8□□□□□ -1
TDP1-204ENST00000545686 GLOD4Q9HC38 313 aa8.8□□□□□ -1
TDP1-204ENST00000545686 ARHGEF38Q9NXL2 777 aa8.8□□□□□ -1
TDP1-204ENST00000545686 UBP1Q9NZI7 540 aa8.8□□□□□ -1
TDP1-204ENST00000545686 OR12D3Q9UGF7 316 aa8.8□□□□□ -1
TDP1-204ENST00000545686 DOCK4Q8N1I0 1966 aa8.8□□□□□ -1
TDP1-204ENST00000545686 RRN3P2A6NIE6 340 aa8.8□□□□□ -1
TDP1-204ENST00000545686 YJEFN3A6XGL0 299 aa8.8□□□□□ -1
TDP1-204ENST00000545686 GABRDO14764 452 aa8.8□□□□□ -1
TDP1-204ENST00000545686 GPR32O75388 356 aa8.8□□□□□ -1
TDP1-204ENST00000545686 TIPRLO75663 272 aa8.8□□□□□ -1
TDP1-204ENST00000545686 FCGR1AP12314 374 aa8.8□□□□□ -1
TDP1-204ENST00000545686 ATP6V1B2P21281 511 aa8.8□□□□□ -1
TDP1-204ENST00000545686 PGGT1BP53609 377 aa8.8□□□□□ -1
TDP1-204ENST00000545686 COQ5Q5HYK3 327 aa8.8□□□□□ -1
TDP1-204ENST00000545686 ZNF772Q68DY9 489 aaPredicted RBP8.8□□□□□ -1
TDP1-204ENST00000545686 CYP2R1Q6VVX0 501 aa8.8□□□□□ -1
TDP1-204ENST00000545686 OTOP3Q7RTS5 596 aa8.8□□□□□ -1
TDP1-204ENST00000545686 PATL1Q86TB9 770 aaKnown RBP8.8□□□□□ -1
TDP1-204ENST00000545686 TRIM74Q86UV6 250 aa8.8□□□□□ -1
TDP1-204ENST00000545686 TRIM73Q86UV7 250 aa8.8□□□□□ -1
TDP1-204ENST00000545686 SEPT8Q92599 483 aa8.8□□□□□ -1
TDP1-204ENST00000545686 FEM1CQ96JP0 617 aa8.8□□□□□ -1
TDP1-204ENST00000545686 ASB2Q96Q27 587 aa8.8□□□□□ -1
TDP1-204ENST00000545686 CYP2S1Q96SQ9 504 aa8.8□□□□□ -1
TDP1-204ENST00000545686 ADI1Q9BV57 179 aa8.8□□□□□ -1
TDP1-204ENST00000545686 PDGFDQ9GZP0 370 aaPredicted RBP8.8□□□□□ -1
TDP1-204ENST00000545686 WDCPQ9H6R7 721 aa8.8□□□□□ -1
TDP1-204ENST00000545686 AGPAT4Q9NRZ5 378 aa8.8□□□□□ -1
TDP1-204ENST00000545686 SMOXQ9NWM0 555 aa8.8□□□□□ -1
TDP1-204ENST00000545686 GPRC5DQ9NZD1 345 aa8.8□□□□□ -1
TDP1-204ENST00000545686 NDUFAF1Q9Y375 327 aa8.8□□□□□ -1
TDP1-204ENST00000545686 TRAF6Q9Y4K3 522 aa8.8□□□□□ -1
TDP1-204ENST00000545686 TRIP12Q14669 1992 aaPredicted RBP8.8□□□□□ -1
TDP1-204ENST00000545686 MYO16Q9Y6X6 1858 aa8.8□□□□□ -1
TDP1-204ENST00000545686 DHRS12A0PJE2 317 aa8.79□□□□□ -1
TDP1-204ENST00000545686 CCDC78A2IDD5 438 aa8.79□□□□□ -1
TDP1-204ENST00000545686 NEMP2A6NFY4 417 aa8.79□□□□□ -1
TDP1-204ENST00000545686 CBFA2T3O75081 653 aa8.79□□□□□ -1
TDP1-204ENST00000545686 GPIP06744 558 aa8.79□□□□□ -1
TDP1-204ENST00000545686 NCAM1P13591 858 aa8.79□□□□□ -1
TDP1-204ENST00000545686 DARSP14868 501 aaKnown RBP8.79□□□□□ -1
TDP1-204ENST00000545686 IL10P22301 178 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms