RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 TPX2Q9ULW0 747 aaKnown RBP13.09□□□□□ -0.31
CDCA3-210ENST00000545368 ZDBF2Q9HCK1 2354 aa13.09□□□□□ -0.31
CDCA3-210ENST00000545368 LOC285095A0A1B0GVY8 99 aa13.08□□□□□ -0.32
CDCA3-210ENST00000545368 AP3B1O00203 1094 aa13.08□□□□□ -0.32
CDCA3-210ENST00000545368 AGTP01019 485 aa13.08□□□□□ -0.32
CDCA3-210ENST00000545368 PDHA1P08559 390 aa13.08□□□□□ -0.32
CDCA3-210ENST00000545368 P2RY2P41231 377 aa13.08□□□□□ -0.32
CDCA3-210ENST00000545368 PXNP49023 591 aaPredicted RBP13.08□□□□□ -0.32
CDCA3-210ENST00000545368 TPMTP51580 245 aa13.08□□□□□ -0.32
CDCA3-210ENST00000545368 TUBB4BP68371 445 aa13.08□□□□□ -0.32
CDCA3-210ENST00000545368 CSTF1Q05048 431 aaKnown RBP13.08□□□□□ -0.32
CDCA3-210ENST00000545368 ELP6Q0PNE2 266 aa13.08□□□□□ -0.32
CDCA3-210ENST00000545368 CNTN1Q12860 1018 aa13.08□□□□□ -0.32
CDCA3-210ENST00000545368 CALCOCO2Q13137 446 aa13.08□□□□□ -0.32
CDCA3-210ENST00000545368 SPARCL1Q14515 664 aa13.08□□□□□ -0.32
CDCA3-210ENST00000545368 KCNJ11Q14654 390 aa13.08□□□□□ -0.32
CDCA3-210ENST00000545368 SLC1A5Q15758 541 aa13.08□□□□□ -0.32
CDCA3-210ENST00000545368 UGP2Q16851 508 aa13.08□□□□□ -0.32
CDCA3-210ENST00000545368 TEX35Q5T0J7 233 aa13.08□□□□□ -0.32
CDCA3-210ENST00000545368 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.08□□□□□ -0.32
CDCA3-210ENST00000545368 SLC25A41Q8N5S1 370 aa13.08□□□□□ -0.32
CDCA3-210ENST00000545368 DNAAF3Q8N9W5 541 aa13.08□□□□□ -0.32
CDCA3-210ENST00000545368 CPT1BQ92523 772 aa13.08□□□□□ -0.32
CDCA3-210ENST00000545368 SPACA7Q96KW9 195 aa13.08□□□□□ -0.32
CDCA3-210ENST00000545368 TRIB3Q96RU7 358 aa13.08□□□□□ -0.32
CDCA3-210ENST00000545368 APOL2Q9BQE5 337 aa13.08□□□□□ -0.32
CDCA3-210ENST00000545368 DPH5Q9H2P9 285 aa13.08□□□□□ -0.32
CDCA3-210ENST00000545368 ITM2CQ9NQX7 267 aa13.08□□□□□ -0.32
CDCA3-210ENST00000545368 FBXO4Q9UKT5 387 aa13.08□□□□□ -0.32
CDCA3-210ENST00000545368 CCDC163A0A0D9SF12 145 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 CAPN8A6NHC0 703 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 ANKRD66B4E2M5 251 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 SMAPO00193 183 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 PLK4O00444 970 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 NEMP1O14524 444 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 USP12O75317 370 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 SUN1O94901 812 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 PRLP01236 227 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 ATXN1LP0C7T5 689 aaKnown RBP13.07□□□□□ -0.32
CDCA3-210ENST00000545368 CYP2A6P11509 494 aaPredicted RBP13.07□□□□□ -0.32
CDCA3-210ENST00000545368 TIMP2P16035 220 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 OXTRP30559 389 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 ADRA1AP35348 466 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 ABL2P42684 1182 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 MAGEA6P43360 314 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 NUBP1P53384 320 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 SLC7A5Q01650 507 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 CDH17Q12864 832 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 QPCTQ16769 361 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 USP39Q53GS9 565 aaKnown RBP13.07□□□□□ -0.32
CDCA3-210ENST00000545368 SIRPB2Q5JXA9 342 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 PIP5KL1Q5T9C9 394 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 RNASEH2BQ5TBB1 312 aaKnown RBP13.07□□□□□ -0.32
CDCA3-210ENST00000545368 AGBL4Q5VU57 503 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 TSSK4Q6SA08 328 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 RANBP10Q6VN20 620 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 FAM124AQ86V42 546 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 HOOK3Q86VS8 718 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 ZSWIM9Q86XI8 627 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 PIH1D2Q8WWB5 315 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 SRPK1Q96SB4 655 aaKnown RBP13.07□□□□□ -0.32
CDCA3-210ENST00000545368 BTBD1Q9H0C5 482 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 NEUROG2Q9H2A3 272 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 SGK2Q9HBY8 427 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 PCDH12Q9NPG4 1184 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 RRAGDQ9NQL2 400 aaPredicted RBP13.07□□□□□ -0.32
CDCA3-210ENST00000545368 SERGEFQ9UGK8 458 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 CYP8B1Q9UNU6 501 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 SNX24Q9Y343 169 aa13.07□□□□□ -0.32
CDCA3-210ENST00000545368 A0A0J9YYE9 177 aa13.06□□□□□ -0.32
CDCA3-210ENST00000545368 LRRC72A6NJI9 287 aa13.06□□□□□ -0.32
CDCA3-210ENST00000545368 PLRG1O43660 514 aaKnown RBP13.06□□□□□ -0.32
CDCA3-210ENST00000545368 AP1G1O43747 822 aa13.06□□□□□ -0.32
CDCA3-210ENST00000545368 TMEM63AO94886 807 aa13.06□□□□□ -0.32
CDCA3-210ENST00000545368 SEC31AO94979 1220 aaKnown RBP13.06□□□□□ -0.32
CDCA3-210ENST00000545368 IGLV3-19P01714 112 aa13.06□□□□□ -0.32
CDCA3-210ENST00000545368 TRBC1P01850 177 aa13.06□□□□□ -0.32
CDCA3-210ENST00000545368 PRKCGP05129 697 aa13.06□□□□□ -0.32
CDCA3-210ENST00000545368 ALPIP09923 528 aa13.06□□□□□ -0.32
CDCA3-210ENST00000545368 RHOXF2BP0C7M4 288 aa13.06□□□□□ -0.32
CDCA3-210ENST00000545368 CTPS1P17812 591 aa13.06□□□□□ -0.32
CDCA3-210ENST00000545368 ITIH2P19823 946 aa13.06□□□□□ -0.32
CDCA3-210ENST00000545368 CHRNA4P43681 627 aa13.06□□□□□ -0.32
CDCA3-210ENST00000545368 RPL21P46778 160 aaKnown RBP13.06□□□□□ -0.32
CDCA3-210ENST00000545368 ITGA8P53708 1063 aa13.06□□□□□ -0.32
CDCA3-210ENST00000545368 ADPRHP54922 357 aa13.06□□□□□ -0.32
CDCA3-210ENST00000545368 FAM193AP78312 1265 aa13.06□□□□□ -0.32
CDCA3-210ENST00000545368 GUCY2DQ02846 1103 aa13.06□□□□□ -0.32
CDCA3-210ENST00000545368 MORF4L2Q15014 288 aa13.06□□□□□ -0.32
CDCA3-210ENST00000545368 LRRC73Q5JTD7 316 aa13.06□□□□□ -0.32
CDCA3-210ENST00000545368 DUPD1Q68J44 220 aa13.06□□□□□ -0.32
CDCA3-210ENST00000545368 WDR5BQ86VZ2 330 aa13.06□□□□□ -0.32
CDCA3-210ENST00000545368 LONP2Q86WA8 852 aa13.06□□□□□ -0.32
CDCA3-210ENST00000545368 NAT8LQ8N9F0 302 aa13.06□□□□□ -0.32
CDCA3-210ENST00000545368 LRRN4CLQ8ND94 238 aa13.06□□□□□ -0.32
CDCA3-210ENST00000545368 OR52K1Q8NGK4 314 aa13.06□□□□□ -0.32
CDCA3-210ENST00000545368 OR14C36Q8NHC7 312 aa13.06□□□□□ -0.32
CDCA3-210ENST00000545368 CXorf40AQ8TE69 158 aa13.06□□□□□ -0.32
CDCA3-210ENST00000545368 FAM131CQ96AQ9 280 aa13.06□□□□□ -0.32
CDCA3-210ENST00000545368 SCRN2Q96FV2 425 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms