RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 PSPC1Q8WXF1 523 aaKnown RBP4.3□□□□□ -1.72
SNHG1-222ENST00000545308 FAM149B1Q96BN6 582 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 REPS1Q96D71 796 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 DAZAP1Q96EP5 407 aaKnown RBP4.3□□□□□ -1.72
SNHG1-222ENST00000545308 CCDC17Q96LX7 622 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 BAG1Q99933 345 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-222ENST00000545308 DUSP26Q9BV47 211 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.3□□□□□ -1.721e-6■□□□□ 8.4
SNHG1-222ENST00000545308 FBRSL1Q9HCM7 1045 aaKnown RBP4.3□□□□□ -1.72
SNHG1-222ENST00000545308 BABAM1Q9NWV8 329 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 SUCLA2Q9P2R7 463 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-222ENST00000545308 CTNNAL1Q9UBT7 734 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 CHORDC1Q9UHD1 332 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-222ENST00000545308 NOL7Q9UMY1 257 aaKnown RBP4.3□□□□□ -1.72
SNHG1-222ENST00000545308 A4GNTQ9UNA3 340 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 DHDHQ9UQ10 334 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 ZNF711Q9Y462 761 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 ADGRB3O60242 1522 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 ASXL1Q8IXJ9 1541 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.29□□□□□ -1.72
SNHG1-222ENST00000545308 ANKRD30AQ9BXX3 1397 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 KIF15Q9NS87 1388 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 ARHGAP10A1A4S6 786 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 CXorf65A6NEN9 183 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 CBY3A6NI87 242 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 KRTAP29-1A8MX34 341 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-222ENST00000545308 A8MZ25 164 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 H7C0S8 307 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 H7C1Q1 480 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 TAF4O00268 1085 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 MGST3O14880 152 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 HLA-DQA2P01906 255 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 TUBBP07437 444 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 SELLP14151 372 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 AKR1A1P14550 325 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 COPB2P35606 906 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 CDH8P55286 799 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 C1QTNF8P60827 252 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 ROR1Q01973 937 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 LRMPQ12912 555 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 CRYMQ14894 314 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 ZNF169Q14929 603 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-222ENST00000545308 RNPS1Q15287 305 aaKnown RBP4.29□□□□□ -1.72
SNHG1-222ENST00000545308 TAF11Q15544 211 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 DPCR1Q3MIW9 517 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 PLK5Q496M5 336 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 CC2D1BQ5T0F9 858 aaKnown RBP4.29□□□□□ -1.72
SNHG1-222ENST00000545308 VWA5B1Q5TIE3 1220 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 GKAP1Q5VSY0 366 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-222ENST00000545308 FAM171A1Q5VUB5 890 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 TBC1D9BQ66K14 1250 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 NAA16Q6N069 864 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-222ENST00000545308 CLEC17AQ6ZS10 378 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 GPAT4Q86UL3 456 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 KCTD6Q8NC69 237 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 GDPD5Q8WTR4 605 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 ZFPM2Q8WW38 1151 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 KAT2AQ92830 837 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 GTF3C6Q969F1 213 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 SMARCE1Q969G3 411 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 MMABQ96EY8 250 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-222ENST00000545308 TM2D2Q9BX73 214 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 ALDH8A1Q9H2A2 487 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-222ENST00000545308 ENTPD7Q9NQZ7 604 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 SPATS2LQ9NUQ6 558 aaKnown RBP4.29□□□□□ -1.72
SNHG1-222ENST00000545308 ARL8BQ9NVJ2 186 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 GRHL1Q9NZI5 618 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 ABI3Q9P2A4 366 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 ADAM21Q9UKJ8 722 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 LMTK2Q8IWU2 1503 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 NOS1P29475 1434 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 MST1RQ04912 1400 aa4.29□□□□□ -1.72
SNHG1-222ENST00000545308 PARD3Q8TEW0 1356 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 KAT6AQ92794 2004 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 FAM90A8PA6NJQ4 464 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 LRRC53A6NM62 1247 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 BTBD19C9JJ37 291 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 UBE2CO00762 179 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 TP73O15350 636 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 GCATO75600 419 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 HNRNPCP07910 306 aaKnown RBP eCLIP4.28□□□□□ -1.72
SNHG1-222ENST00000545308 FAM90A13PP0C7W8 464 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 FAM90A24PP0C7X0 464 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 ST6GAL1P15907 406 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 POU1F1P28069 291 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 SKIV2L2P42285 1042 aaKnown RBP4.28□□□□□ -1.72
SNHG1-222ENST00000545308 PIP4K2AP48426 406 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-222ENST00000545308 ARSFP54793 590 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 PRAMEP78395 509 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 SIM1P81133 766 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-222ENST00000545308 GOLGA8DPQ0D2H9 430 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 NIPAL4Q0D2K0 466 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 FOXF2Q12947 444 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 CSTF3Q12996 717 aaKnown RBP4.28□□□□□ -1.72
SNHG1-222ENST00000545308 AIMP2Q13155 320 aaKnown RBP4.28□□□□□ -1.72
SNHG1-222ENST00000545308 PFKFB3Q16875 520 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-222ENST00000545308 EDRF1Q3B7T1 1238 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 C5orf22Q49AR2 442 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 BMP2KLQ5H9B9 411 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 KIAA1755Q5JYT7 1200 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms