RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 PRRC2AP48634 2157 aaKnown RBP6.93□□□□□ -1.3
LDHA-223ENST00000545215 PKDREJQ9NTG1 2253 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.93□□□□□ -1.3
LDHA-223ENST00000545215 NPHP3-ACAD11A0A0J9YXS1 232 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 BICDL2A1A5D9 508 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 PDXKO00764 312 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 CLGNO14967 610 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 FFAR2O15552 330 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 ZG16O60844 167 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 ULK1O75385 1050 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 RFPL1O75677 317 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 GCNT3O95395 438 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 LORP23490 312 aaPredicted RBP6.93□□□□□ -1.3
LDHA-223ENST00000545215 MATR3P43243 847 aaKnown RBP eCLIP6.93□□□□□ -1.3
LDHA-223ENST00000545215 PDE6CP51160 858 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 PCBP3P57721 371 aaKnown RBP6.93□□□□□ -1.3
LDHA-223ENST00000545215 POU5F1Q01860 360 aaKnown RBP6.93□□□□□ -1.3
LDHA-223ENST00000545215 RUNX1T1Q06455 604 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 CDC20Q12834 499 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 FAPQ12884 760 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 ZNF177Q13360 481 aaPredicted RBP6.93□□□□□ -1.3
LDHA-223ENST00000545215 STX1AQ16623 288 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 NADK2Q4G0N4 442 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 SLC39A12Q504Y0 691 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 SLC45A4Q5BKX6 768 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 L1TD1Q5T7N2 865 aaKnown RBP6.93□□□□□ -1.3
LDHA-223ENST00000545215 NUGGCQ68CJ6 796 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 SLFN12LQ6IEE8 588 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 EPM2AIP1Q7L775 607 aaPredicted RBP6.93□□□□□ -1.3
LDHA-223ENST00000545215 USP37Q86T82 979 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 SHISA5Q8N114 240 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 WDR48Q8TAF3 677 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 C2orf15Q8WU43 125 aaKnown RBP6.93□□□□□ -1.3
LDHA-223ENST00000545215 TMEM174Q8WUU8 243 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 JPH3Q8WXH2 748 aaPredicted RBP6.93□□□□□ -1.3
LDHA-223ENST00000545215 FBXW5Q969U6 566 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 C14orf79Q96F83 325 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 TRMT2BQ96GJ1 504 aaKnown RBP6.93□□□□□ -1.3
LDHA-223ENST00000545215 DHTKD1Q96HY7 919 aaPredicted RBP6.93□□□□□ -1.3
LDHA-223ENST00000545215 SLC45A3Q96JT2 553 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 ZMAT2Q96NC0 199 aaKnown RBP6.93□□□□□ -1.3
LDHA-223ENST00000545215 PTCHD1Q96NR3 888 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 FIZ1Q96SL8 496 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 STRA6Q9BX79 667 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 B3GNT4Q9C0J1 378 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 SGK2Q9HBY8 427 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 NLGN3Q9NZ94 848 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 TBC1D14Q9P2M4 693 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 PISDQ9UG56 409 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 ZNF180Q9UJW8 692 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 ADAM21Q9UKJ8 722 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 MAN1B1Q9UKM7 699 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 TCFL5Q9UL49 500 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 NEU2Q9Y3R4 380 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 U3KQE9 123 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 SCN8AQ9UQD0 1980 aa6.93□□□□□ -1.3
LDHA-223ENST00000545215 TRIP11Q15643 1979 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 ANKUB1A6NFN9 424 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 WASH4PA8MWX3 477 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 FAM47E-STBD1D6RA91 191 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 TMX2-CTNND1H3BSU7 103 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 ABLIM1O14639 778 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 HNRNPDLO14979 420 aaKnown RBP6.92□□□□□ -1.3
LDHA-223ENST00000545215 NPC1O15118 1278 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 CLDN3O15551 220 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 LRRTM2O43300 516 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 DUX1O43812 170 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 CALUO43852 315 aaPredicted RBP6.92□□□□□ -1.3
LDHA-223ENST00000545215 TOM1L1O75674 476 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 FGFR1OPO95684 399 aaKnown RBP6.92□□□□□ -1.3
LDHA-223ENST00000545215 ITGB3P05106 788 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 ALPPL2P10696 532 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 KCNE1P15382 129 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 PFKLP17858 780 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 PROZP22891 400 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 GRK2P25098 689 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 RPL13P26373 211 aaKnown RBP6.92□□□□□ -1.3
LDHA-223ENST00000545215 GRK3P35626 688 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 SLC7A9P82251 487 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 LRRC63Q05C16 580 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 STK4Q13043 487 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 HLTFQ14527 1009 aaKnown RBP eCLIP6.92□□□□□ -1.3
LDHA-223ENST00000545215 NFIL3Q16649 462 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 NKPD1Q17RQ9 610 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 KNOP1Q1ED39 458 aaKnown RBP6.92□□□□□ -1.3
LDHA-223ENST00000545215 ZNF765Q7L2R6 523 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 MTERF4Q7Z6M4 381 aaKnown RBP6.92□□□□□ -1.3
LDHA-223ENST00000545215 CACUL1Q86Y37 369 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 C12orf56Q8IXR9 622 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 SYCP3Q8IZU3 236 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 C18orf25Q96B23 403 aaPredicted RBP6.92□□□□□ -1.3
LDHA-223ENST00000545215 OTUB2Q96DC9 234 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 BICD1Q96G01 975 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 ZBTB45Q96K62 511 aaPredicted RBP6.92□□□□□ -1.3
LDHA-223ENST00000545215 TSG101Q99816 390 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 FOXC2Q99958 501 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 FOXP3Q9BZS1 431 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 SLC13A1Q9BZW2 595 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 LHX5Q9H2C1 402 aa6.92□□□□□ -1.3
LDHA-223ENST00000545215 KIAA1586Q9HCI6 787 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms