RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 IQCF3P0C7M6 154 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 FGFR1P11362 822 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 HNRNPLP14866 589 aaKnown RBP eCLIP5.82□□□□□ -1.48
VPS50-220ENST00000544910 ITGALP20701 1170 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 FASP25445 335 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 AKT1P31749 480 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 NNMTP40261 264 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 C21orf59P57076 290 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 MAXP61244 160 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 PCLAFQ15004 111 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 DDR2Q16832 855 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 TTLL9Q3SXZ7 439 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 SLC9B1Q4ZJI4 515 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 CEP78Q5JTW2 689 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 SDHAF4Q5VUM1 108 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 LPCAT4Q643R3 524 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 ASRGL1Q7L266 308 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 DSELQ8IZU8 1212 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 PPP1R14BQ96C90 147 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 SIGLEC10Q96LC7 697 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 TEKT5Q96M29 485 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 ZNF570Q96NI8 536 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 NPAS2Q99743 824 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 DHRS4Q9BTZ2 278 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 MLPHQ9BV36 600 aaPredicted RBP5.82□□□□□ -1.48
VPS50-220ENST00000544910 CCDC106Q9BWC9 280 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 SEMA4BQ9NPR2 832 aaPredicted RBP5.82□□□□□ -1.48
VPS50-220ENST00000544910 PGAP2Q9UHJ9 254 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 POLG2Q9UHN1 485 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 VPS28Q9UK41 221 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 FBXO5Q9UKT4 447 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 PLA2G4CQ9UP65 541 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 TMEM247A6NEH6 219 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 UNCXA6NJT0 531 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 TSPAN3O60637 253 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 SNAI1O95863 264 aaPredicted RBP5.82□□□□□ -1.48
VPS50-220ENST00000544910 IL1BP01584 269 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 ALBP02768 609 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 S100A1P23297 94 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 NDST2P52849 883 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 PFKFB4Q16877 469 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 LSM12Q3MHD2 195 aaKnown RBP5.82□□□□□ -1.48
VPS50-220ENST00000544910 SGO1Q5FBB7 561 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 ZC3H12BQ5HYM0 836 aaKnown RBP5.82□□□□□ -1.48
VPS50-220ENST00000544910 RALGPS1Q5JS13 557 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 ANKS6Q68DC2 871 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 IYDQ6PHW0 289 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 CYP2R1Q6VVX0 501 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 GK5Q6ZS86 529 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 NANOGNBQ7Z5D8 188 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 ARFGAP1Q8N6T3 406 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 RTL3Q8N8U3 475 aaKnown RBP5.82□□□□□ -1.48
VPS50-220ENST00000544910 STAG3L4Q8TBR4 150 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 OMA1Q96E52 524 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 MRPL9Q9BYD2 267 aaKnown RBP5.82□□□□□ -1.48
VPS50-220ENST00000544910 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.82□□□□□ -1.48
VPS50-220ENST00000544910 WDR55Q9H6Y2 383 aaPredicted RBP5.82□□□□□ -1.48
VPS50-220ENST00000544910 RMND5AQ9H871 391 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 CASS4Q9NQ75 786 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 TAS2R1Q9NYW7 299 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 DNMT3LQ9UJW3 386 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 PACSIN3Q9UKS6 424 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 RBBP6Q7Z6E9 1792 aaKnown RBP5.82□□□□□ -1.48
VPS50-220ENST00000544910 GLTPD2A6NH11 291 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 BBIP1A8MTZ0 92 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 WBP4O75554 376 aaKnown RBP5.81□□□□□ -1.48
VPS50-220ENST00000544910 SMNDC1O75940 238 aaKnown RBP eCLIP5.81□□□□□ -1.48
VPS50-220ENST00000544910 FGF1P05230 155 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 ZNF23P17027 643 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 LBPP18428 481 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 MAPK1P28482 360 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 SOX6P35712 828 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 DMPKQ09013 629 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 MAD2L1Q13257 205 aaPredicted RBP5.81□□□□□ -1.48
VPS50-220ENST00000544910 PEX6Q13608 980 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 DPYSQ14117 519 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 ARHGEF7Q14155 803 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 PARP15Q460N3 678 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 REP15Q6BDI9 236 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 MON1AQ86VX9 555 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 PGAM4Q8N0Y7 254 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 SPATA22Q8NHS9 363 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 NPLOC4Q8TAT6 608 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 TRPC4APQ8TEL6 797 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 HGH1Q9BTY7 390 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 OXSMQ9NWU1 459 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 DAPK2Q9UIK4 370 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 RAD51BO15315 384 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 IPO13O94829 963 aaKnown RBP5.81□□□□□ -1.48
VPS50-220ENST00000544910 RHOQP17081 205 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 C16orf72Q14CZ0 275 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 ACAP2Q15057 778 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 RAB6CQ53S08 254 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 STEAP4Q687X5 459 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 TXNDC11Q6PKC3 985 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 HFE2Q6ZVN8 426 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 C16orf59Q7L2K0 433 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 NKAPQ8N5F7 415 aaKnown RBP5.81□□□□□ -1.48
VPS50-220ENST00000544910 OR4L1Q8NH43 312 aa5.81□□□□□ -1.48
VPS50-220ENST00000544910 ACTRT2Q8TDY3 377 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms