RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 STARD13Q9Y3M8 1113 aa9.61□□□□□ -0.87
YBX3-215ENST00000544504 PIAS3Q9Y6X2 628 aa9.61□□□□□ -0.87
YBX3-215ENST00000544504 KIAA1549LQ6ZVL6 1849 aa9.61□□□□□ -0.87
YBX3-215ENST00000544504 IGF2RP11717 2491 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 EDDM13A0A1B0GTR0 161 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 SDR42E2A6NKP2 422 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 SRRM3A6NNA2 597 aaPredicted RBP9.6□□□□□ -0.87
YBX3-215ENST00000544504 ALOX15BO15296 676 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 PMPCBO75439 489 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 SPAG6O75602 509 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 TMEM63AO94886 807 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 NDST3O95803 873 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 MT-CO1P00395 513 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 FGF1P05230 155 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 HNRNPLP14866 589 aaKnown RBP eCLIP9.6□□□□□ -0.87
YBX3-215ENST00000544504 TSHRP16473 764 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 SERPINA4P29622 427 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 ECHS1P30084 290 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 MAXP61244 160 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 SKOR1P84550 965 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 DSC2Q02487 901 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 CDK18Q07002 472 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 BCL2L1Q07817 233 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 NIPAL4Q0D2K0 466 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 SF3A2Q15428 464 aaKnown RBP9.6□□□□□ -0.87
YBX3-215ENST00000544504 TRADDQ15628 312 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 MYLK3Q32MK0 819 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 HSF5Q4G112 596 aaPredicted RBP9.6□□□□□ -0.87
YBX3-215ENST00000544504 SDE2Q6IQ49 451 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 PSAPL1Q6NUJ1 521 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 NCEH1Q6PIU2 408 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 KDELC1Q6UW63 502 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 SERPINA13PQ6UXR4 307 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 CCDC25Q86WR0 208 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 PGBD5Q8N414 524 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 RYBPQ8N488 228 aaPredicted RBP9.6□□□□□ -0.87
YBX3-215ENST00000544504 PAF1Q8N7H5 531 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 IPMKQ8NFU5 416 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 SPATA22Q8NHS9 363 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 PTCD2Q8WV60 388 aaKnown RBP9.6□□□□□ -0.87
YBX3-215ENST00000544504 ZNF419Q96HQ0 510 aaPredicted RBP9.6□□□□□ -0.87
YBX3-215ENST00000544504 LOXL4Q96JB6 756 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 RPL10LQ96L21 214 aaKnown RBP9.6□□□□□ -0.87
YBX3-215ENST00000544504 MRGPRX3Q96LB0 322 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 ZNF641Q96N77 438 aaPredicted RBP9.6□□□□□ -0.87
YBX3-215ENST00000544504 SERPINB12Q96P63 405 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 OSBPL1AQ9BXW6 950 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 CPEB1Q9BZB8 566 aaKnown RBP9.6□□□□□ -0.87
YBX3-215ENST00000544504 IL22Q9GZX6 179 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 FBRSQ9HAH7 460 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 NOD2Q9HC29 1040 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 CASS4Q9NQ75 786 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 RXFP3Q9NSD7 469 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 SAMD15Q9P1V8 674 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 LHX6Q9UPM6 363 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 AKAP13Q12802 2813 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 CNOT1A5YKK6 2376 aaKnown RBP9.6□□□□□ -0.87
YBX3-215ENST00000544504 MYO18AQ92614 2054 aaKnown RBP9.6□□□□□ -0.87
YBX3-215ENST00000544504 BPTFQ12830 3046 aa9.6□□□□□ -0.87
YBX3-215ENST00000544504 LOC285095A0A1B0GVY8 99 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 WASH3PC4AMC7 463 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 PRRT4C9JH25 899 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 E7ESA3 106 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 GOLGA8MH3BSY2 632 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 K7ERQ8 282 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 K7ESF4 209 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 MUSKO15146 869 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 TRIM24O15164 1050 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 TP73O15350 636 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 SMAD6O43541 496 aaKnown RBP9.59□□□□□ -0.87
YBX3-215ENST00000544504 TTC4O95801 387 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 MT-CYBP00156 380 aaPredicted RBP9.59□□□□□ -0.87
YBX3-215ENST00000544504 CPP00450 1065 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 PRNPP04156 253 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 MMP2P08253 660 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 GSTA2P09210 222 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 CHRNB1P11230 501 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 HOXA6P31267 233 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 PHBP35232 272 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 ADRA1AP35348 466 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 CTSOP43234 321 aaPredicted RBP9.59□□□□□ -0.87
YBX3-215ENST00000544504 MAGEA3P43357 314 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 STK19P49842 368 aaPredicted RBP9.59□□□□□ -0.87
YBX3-215ENST00000544504 GALK1P51570 392 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 POLR2LP62875 67 aaKnown RBP9.59□□□□□ -0.87
YBX3-215ENST00000544504 MRPS21P82921 87 aaKnown RBP9.59□□□□□ -0.87
YBX3-215ENST00000544504 DHX9Q08211 1270 aaKnown RBP9.59□□□□□ -0.87
YBX3-215ENST00000544504 PDIA2Q13087 525 aaKnown RBP9.59□□□□□ -0.87
YBX3-215ENST00000544504 GAS6Q14393 721 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 PTPRNQ16849 979 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 HNRNPA1L2Q32P51 320 aaKnown RBP9.59□□□□□ -0.87
YBX3-215ENST00000544504 CCDC38Q502W7 563 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 TMEM196Q5HYL7 178 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 DGKKQ5KSL6 1271 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 CFAP58Q5T655 872 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 ANKRD22Q5VYY1 191 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 TMEM215Q68D42 235 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 RANBP10Q6VN20 620 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 TMC3Q7Z5M5 1100 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 PRPF39Q86UA1 669 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms