RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 NXPE3Q969Y0 559 aa30.63■■■□□ 2.49
CCM2-219ENST00000544363 TUBGCP5Q96RT8 1024 aa30.63■■■□□ 2.49
CCM2-219ENST00000544363 C20orf96Q9NUD7 363 aaPredicted RBP30.63■■■□□ 2.49
CCM2-219ENST00000544363 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP30.63■■■□□ 2.49
CCM2-219ENST00000544363 SLC2A6Q9UGQ3 507 aa30.63■■■□□ 2.49
CCM2-219ENST00000544363 LDB2O43679 373 aa30.62■■■□□ 2.49
CCM2-219ENST00000544363 BNIP3LO60238 219 aa30.62■■■□□ 2.49
CCM2-219ENST00000544363 POP4O95707 220 aaKnown RBP30.62■■■□□ 2.49
CCM2-219ENST00000544363 PRKCGP05129 697 aa30.62■■■□□ 2.49
CCM2-219ENST00000544363 PAMP19021 973 aa30.62■■■□□ 2.49
CCM2-219ENST00000544363 KCNA5P22460 613 aa30.62■■■□□ 2.49
CCM2-219ENST00000544363 EIF2DP41214 584 aaKnown RBP30.62■■■□□ 2.49
CCM2-219ENST00000544363 CCNHP51946 323 aaPredicted RBP30.62■■■□□ 2.49
CCM2-219ENST00000544363 EIF4HQ15056 248 aaKnown RBP30.62■■■□□ 2.49
CCM2-219ENST00000544363 QPCTQ16769 361 aa30.62■■■□□ 2.49
CCM2-219ENST00000544363 PDPK2PQ6A1A2 396 aa30.62■■■□□ 2.49
CCM2-219ENST00000544363 DPY19L3Q6ZPD9 716 aa30.62■■■□□ 2.49
CCM2-219ENST00000544363 TERB1Q8NA31 727 aa30.62■■■□□ 2.49
CCM2-219ENST00000544363 CPEB1Q9BZB8 566 aaKnown RBP30.62■■■□□ 2.49
CCM2-219ENST00000544363 UBE2ZQ9H832 354 aaPredicted RBP30.62■■■□□ 2.49
CCM2-219ENST00000544363 ZFATQ9P243 1243 aa30.62■■■□□ 2.49
CCM2-219ENST00000544363 KIAA1549LQ6ZVL6 1849 aa30.62■■■□□ 2.49
CCM2-219ENST00000544363 TTC34A8MYJ7 566 aa30.62■■■□□ 2.49
CCM2-219ENST00000544363 PALM2-AKAP2B1ALY0 433 aaPredicted RBP30.62■■■□□ 2.49
CCM2-219ENST00000544363 UGT1A9O60656 530 aa30.62■■■□□ 2.49
CCM2-219ENST00000544363 PIRTP0C851 137 aa30.62■■■□□ 2.49
CCM2-219ENST00000544363 SERPINA4P29622 427 aa30.62■■■□□ 2.49
CCM2-219ENST00000544363 RPL26P61254 145 aaKnown RBP30.62■■■□□ 2.49
CCM2-219ENST00000544363 RAD51Q06609 339 aa30.62■■■□□ 2.49
CCM2-219ENST00000544363 CNGA3Q16281 694 aa30.62■■■□□ 2.49
CCM2-219ENST00000544363 KIAA0930Q6ICG6 404 aaPredicted RBP30.62■■■□□ 2.49
CCM2-219ENST00000544363 EXOC3L1Q86VI1 746 aa30.62■■■□□ 2.49
CCM2-219ENST00000544363 VOPP1Q96AW1 172 aa30.62■■■□□ 2.49
CCM2-219ENST00000544363 UGT1A7Q9HAW7 530 aa30.62■■■□□ 2.49
CCM2-219ENST00000544363 UGT1A10Q9HAW8 530 aa30.62■■■□□ 2.49
CCM2-219ENST00000544363 UGT1A8Q9HAW9 530 aa30.62■■■□□ 2.49
CCM2-219ENST00000544363 RPL26L1Q9UNX3 145 aaKnown RBP30.62■■■□□ 2.49
CCM2-219ENST00000544363 FAM155BO75949 473 aa30.61■■■□□ 2.49
CCM2-219ENST00000544363 NR1D1P20393 614 aa30.61■■■□□ 2.49
CCM2-219ENST00000544363 ST8SIA6P61647 398 aa30.61■■■□□ 2.49
CCM2-219ENST00000544363 SMAD4Q13485 552 aaKnown RBP30.61■■■□□ 2.49
CCM2-219ENST00000544363 GRM3Q14832 879 aa30.61■■■□□ 2.49
CCM2-219ENST00000544363 CCDC85BQ15834 202 aaPredicted RBP30.61■■■□□ 2.49
CCM2-219ENST00000544363 HSP90AA5PQ58FG0 334 aa30.61■■■□□ 2.49
CCM2-219ENST00000544363 OR2A12Q8NGT7 310 aa30.61■■■□□ 2.49
CCM2-219ENST00000544363 BRD9Q9H8M2 597 aa30.61■■■□□ 2.49
CCM2-219ENST00000544363 PLA2G4CQ9UP65 541 aa30.61■■■□□ 2.49
CCM2-219ENST00000544363 SPO11Q9Y5K1 396 aa30.61■■■□□ 2.49
CCM2-219ENST00000544363 IQANK1A0A1B0GTG1 560 aa30.6■■■□□ 2.49
CCM2-219ENST00000544363 WASH3PC4AMC7 463 aa30.6■■■□□ 2.49
CCM2-219ENST00000544363 SLC8A1P32418 973 aa30.6■■■□□ 2.49
CCM2-219ENST00000544363 RECQLP46063 649 aaPredicted RBP30.6■■■□□ 2.49
CCM2-219ENST00000544363 GRIA4P48058 902 aa30.6■■■□□ 2.49
CCM2-219ENST00000544363 ARCN1P48444 511 aaKnown RBP30.6■■■□□ 2.49
CCM2-219ENST00000544363 EPHB1P54762 984 aa30.6■■■□□ 2.49
CCM2-219ENST00000544363 SMAD1Q15797 465 aaKnown RBP30.6■■■□□ 2.49
CCM2-219ENST00000544363 TEDDM1Q5T9Z0 273 aa30.6■■■□□ 2.49
CCM2-219ENST00000544363 NAIF1Q69YI7 327 aaPredicted RBP30.6■■■□□ 2.49
CCM2-219ENST00000544363 TAOK1Q7L7X3 1001 aa30.6■■■□□ 2.49
CCM2-219ENST00000544363 PIH1D2Q8WWB5 315 aa30.6■■■□□ 2.49
CCM2-219ENST00000544363 PEX13Q92968 403 aa30.6■■■□□ 2.49
CCM2-219ENST00000544363 CHFRQ96EP1 664 aa30.6■■■□□ 2.49
CCM2-219ENST00000544363 RIMKLBQ9ULI2 386 aa30.6■■■□□ 2.49
CCM2-219ENST00000544363 ARL5AQ9Y689 179 aa30.6■■■□□ 2.49
CCM2-219ENST00000544363 FOXO6A8MYZ6 492 aa30.59■■■□□ 2.49
CCM2-219ENST00000544363 MBTPS2O43462 519 aa30.59■■■□□ 2.49
CCM2-219ENST00000544363 VAPBO95292 243 aa30.59■■■□□ 2.49
CCM2-219ENST00000544363 CRTAMO95727 393 aa30.59■■■□□ 2.49
CCM2-219ENST00000544363 KRT15P19012 456 aa30.59■■■□□ 2.49
CCM2-219ENST00000544363 HPDP32754 393 aaPredicted RBP30.59■■■□□ 2.49
CCM2-219ENST00000544363 TRABD2AQ86V40 505 aa30.59■■■□□ 2.49
CCM2-219ENST00000544363 SLC17A6Q9P2U8 582 aa30.59■■■□□ 2.49
CCM2-219ENST00000544363 KCTD3Q9Y597 815 aa30.59■■■□□ 2.49
CCM2-219ENST00000544363 ARNTP27540 789 aa30.58■■■□□ 2.49
CCM2-219ENST00000544363 TAF1AQ15573 450 aaPredicted RBP30.58■■■□□ 2.49
CCM2-219ENST00000544363 PREPLQ4J6C6 727 aaPredicted RBP30.58■■■□□ 2.49
CCM2-219ENST00000544363 KDM1BQ8NB78 822 aa30.58■■■□□ 2.49
CCM2-219ENST00000544363 CHST14Q8NCH0 376 aa30.58■■■□□ 2.49
CCM2-219ENST00000544363 OR13J1Q8NGT2 312 aa30.58■■■□□ 2.49
CCM2-219ENST00000544363 ZDHHC6Q9H6R6 413 aa30.58■■■□□ 2.49
CCM2-219ENST00000544363 TBC1D3BA6NDS4 549 aa30.58■■■□□ 2.49
CCM2-219ENST00000544363 C2CD4DB7Z1M9 353 aa30.58■■■□□ 2.49
CCM2-219ENST00000544363 SERPINB9P50453 376 aa30.58■■■□□ 2.49
CCM2-219ENST00000544363 GYS2P54840 703 aa30.58■■■□□ 2.49
CCM2-219ENST00000544363 CBX1P83916 185 aa30.58■■■□□ 2.49
CCM2-219ENST00000544363 LGSNQ5TDP6 509 aa30.58■■■□□ 2.49
CCM2-219ENST00000544363 PRPF38BQ5VTL8 546 aaKnown RBP30.58■■■□□ 2.49
CCM2-219ENST00000544363 GLT6D1Q7Z4J2 308 aa30.58■■■□□ 2.49
CCM2-219ENST00000544363 MDGA1Q8NFP4 955 aa30.58■■■□□ 2.49
CCM2-219ENST00000544363 MZB1Q8WU39 189 aa30.58■■■□□ 2.49
CCM2-219ENST00000544363 ZNF641Q96N77 438 aaPredicted RBP30.58■■■□□ 2.49
CCM2-219ENST00000544363 SMIM14Q96QK8 99 aa30.58■■■□□ 2.49
CCM2-219ENST00000544363 AGAP2Q99490 1192 aa30.58■■■□□ 2.49
CCM2-219ENST00000544363 CDX2Q99626 313 aaPredicted RBP30.58■■■□□ 2.49
CCM2-219ENST00000544363 SUV39H2Q9H5I1 410 aa30.58■■■□□ 2.49
CCM2-219ENST00000544363 IARS2Q9NSE4 1012 aaKnown RBP30.58■■■□□ 2.49
CCM2-219ENST00000544363 HACD3Q9P035 362 aa30.58■■■□□ 2.49
CCM2-219ENST00000544363 ACTL7BQ9Y614 415 aa30.58■■■□□ 2.49
CCM2-219ENST00000544363 PPP2R2AP63151 447 aa30.57■■■□□ 2.48
CCM2-219ENST00000544363 ACVR1Q04771 509 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms