RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 PIM3Q86V86 326 aa13.77□□□□□ -0.21
HCFC2-202ENST00000544223 FITM2Q8N6M3 262 aa13.77□□□□□ -0.21
HCFC2-202ENST00000544223 HJURPQ8NCD3 748 aaPredicted RBP13.77□□□□□ -0.21
HCFC2-202ENST00000544223 KCTD4Q8WVF5 259 aa13.77□□□□□ -0.21
HCFC2-202ENST00000544223 PRR11Q96HE9 360 aaPredicted RBP13.77□□□□□ -0.21
HCFC2-202ENST00000544223 ELMO2Q96JJ3 720 aa13.77□□□□□ -0.21
HCFC2-202ENST00000544223 TRIB3Q96RU7 358 aa13.77□□□□□ -0.21
HCFC2-202ENST00000544223 OMDQ99983 421 aa13.77□□□□□ -0.21
HCFC2-202ENST00000544223 ARNT2Q9HBZ2 717 aa13.77□□□□□ -0.21
HCFC2-202ENST00000544223 PCDHB9Q9Y5E1 797 aa13.77□□□□□ -0.21
HCFC2-202ENST00000544223 HEATR9A2RTY3 570 aa13.77□□□□□ -0.21
HCFC2-202ENST00000544223 GFRA2O00451 464 aa13.77□□□□□ -0.21
HCFC2-202ENST00000544223 CEBPBP17676 345 aa13.77□□□□□ -0.21
HCFC2-202ENST00000544223 CR2P20023 1033 aa13.77□□□□□ -0.21
HCFC2-202ENST00000544223 ALDH3A1P30838 453 aa13.77□□□□□ -0.21
HCFC2-202ENST00000544223 RHOAP61586 193 aa13.77□□□□□ -0.21
HCFC2-202ENST00000544223 DLG1Q12959 904 aa13.77□□□□□ -0.21
HCFC2-202ENST00000544223 GDPD5Q8WTR4 605 aa13.77□□□□□ -0.21
HCFC2-202ENST00000544223 ZFYVE19Q96K21 471 aa13.77□□□□□ -0.21
HCFC2-202ENST00000544223 GCNAQ96QF7 691 aa13.77□□□□□ -0.21
HCFC2-202ENST00000544223 OLFM1Q99784 485 aa13.77□□□□□ -0.21
HCFC2-202ENST00000544223 TSSK1BQ9BXA7 367 aa13.77□□□□□ -0.21
HCFC2-202ENST00000544223 SHCBP1LQ9BZQ2 653 aa13.77□□□□□ -0.21
HCFC2-202ENST00000544223 NSRP1Q9H0G5 558 aaKnown RBP13.77□□□□□ -0.21
HCFC2-202ENST00000544223 LHX3Q9UBR4 397 aa13.77□□□□□ -0.21
HCFC2-202ENST00000544223 EVLQ9UI08 416 aaPredicted RBP13.77□□□□□ -0.21
HCFC2-202ENST00000544223 LSM7Q9UK45 103 aaKnown RBP13.77□□□□□ -0.21
HCFC2-202ENST00000544223 FBXO5Q9UKT4 447 aa13.77□□□□□ -0.21
HCFC2-202ENST00000544223 TRIM33Q9UPN9 1127 aa13.77□□□□□ -0.21
HCFC2-202ENST00000544223 ASB3Q9Y575 518 aa13.77□□□□□ -0.21
HCFC2-202ENST00000544223 IRAK3Q9Y616 596 aa13.77□□□□□ -0.21
HCFC2-202ENST00000544223 CCDC162PA2VCL2 907 aa13.76□□□□□ -0.21
HCFC2-202ENST00000544223 ANTXRLA6NF34 631 aa13.76□□□□□ -0.21
HCFC2-202ENST00000544223 MROH6A6NGR9 719 aa13.76□□□□□ -0.21
HCFC2-202ENST00000544223 EPOPA6NHQ4 379 aa13.76□□□□□ -0.21
HCFC2-202ENST00000544223 GOT2P00505 430 aaKnown RBP13.76□□□□□ -0.21
HCFC2-202ENST00000544223 ALADP13716 330 aa13.76□□□□□ -0.21
HCFC2-202ENST00000544223 PRAMEP78395 509 aa13.76□□□□□ -0.21
HCFC2-202ENST00000544223 SLC7A9P82251 487 aa13.76□□□□□ -0.21
HCFC2-202ENST00000544223 TIFABQ6ZNK6 161 aa13.76□□□□□ -0.21
HCFC2-202ENST00000544223 HTR3DQ70Z44 454 aa13.76□□□□□ -0.21
HCFC2-202ENST00000544223 C10orf67Q8IYJ2 551 aa13.76□□□□□ -0.21
HCFC2-202ENST00000544223 CCDC97Q96F63 343 aaPredicted RBP13.76□□□□□ -0.21
HCFC2-202ENST00000544223 MTG2Q9H4K7 406 aa13.76□□□□□ -0.21
HCFC2-202ENST00000544223 IGFLR1Q9H665 355 aa13.76□□□□□ -0.21
HCFC2-202ENST00000544223 FAM95CA0A1B0GW59 222 aa13.75□□□□□ -0.21
HCFC2-202ENST00000544223 PLIN3O60664 434 aa13.75□□□□□ -0.21
HCFC2-202ENST00000544223 SLC35E2BP0CK96 405 aa13.75□□□□□ -0.21
HCFC2-202ENST00000544223 CDC25CP30307 473 aa13.75□□□□□ -0.21
HCFC2-202ENST00000544223 VIPR2P41587 438 aa13.75□□□□□ -0.21
HCFC2-202ENST00000544223 TAS2R39P59534 338 aa13.75□□□□□ -0.21
HCFC2-202ENST00000544223 CREMQ03060 361 aa13.75□□□□□ -0.21
HCFC2-202ENST00000544223 MESP2Q0VG99 397 aa13.75□□□□□ -0.21
HCFC2-202ENST00000544223 PCLAFQ15004 111 aa13.75□□□□□ -0.21
HCFC2-202ENST00000544223 RYBPQ8N488 228 aaPredicted RBP13.75□□□□□ -0.21
HCFC2-202ENST00000544223 OR4K2Q8NGD2 314 aa13.75□□□□□ -0.21
HCFC2-202ENST00000544223 CCT6BQ92526 530 aa13.75□□□□□ -0.21
HCFC2-202ENST00000544223 TDRD1Q9BXT4 1180 aaKnown RBP13.75□□□□□ -0.21
HCFC2-202ENST00000544223 PRKAG3Q9UGI9 489 aa13.75□□□□□ -0.21
HCFC2-202ENST00000544223 SSX2IPQ9Y2D8 614 aa13.75□□□□□ -0.21
HCFC2-202ENST00000544223 SPEGQ15772 3267 aa13.75□□□□□ -0.21
HCFC2-202ENST00000544223 TYW5A2RUC4 315 aaKnown RBP13.75□□□□□ -0.21
HCFC2-202ENST00000544223 CCT8L1PA6NM43 557 aa13.75□□□□□ -0.21
HCFC2-202ENST00000544223 KIAA0754O94854 1291 aa13.75□□□□□ -0.21
HCFC2-202ENST00000544223 UBOX5O94941 541 aa13.75□□□□□ -0.21
HCFC2-202ENST00000544223 BPGMP07738 259 aa13.75□□□□□ -0.21
HCFC2-202ENST00000544223 DGKKQ5KSL6 1271 aa13.75□□□□□ -0.21
HCFC2-202ENST00000544223 FYB2Q5VWT5 728 aa13.75□□□□□ -0.21
HCFC2-202ENST00000544223 NAPRTQ6XQN6 538 aa13.75□□□□□ -0.21
HCFC2-202ENST00000544223 CCDC121Q6ZUS5 278 aa13.75□□□□□ -0.21
HCFC2-202ENST00000544223 RPS27LQ71UM5 84 aaKnown RBP13.75□□□□□ -0.21
HCFC2-202ENST00000544223 ARID3BQ8IVW6 561 aaPredicted RBP13.75□□□□□ -0.21
HCFC2-202ENST00000544223 ZNF366Q8N895 744 aa13.75□□□□□ -0.21
HCFC2-202ENST00000544223 ANKS4BQ8N8V4 417 aa13.75□□□□□ -0.21
HCFC2-202ENST00000544223 FATE1Q969F0 183 aa13.75□□□□□ -0.21
HCFC2-202ENST00000544223 E2F7Q96AV8 911 aa13.75□□□□□ -0.21
HCFC2-202ENST00000544223 SLCO3A1Q9UIG8 710 aa13.75□□□□□ -0.21
HCFC2-202ENST00000544223 BRWD1Q9NSI6 2320 aa13.75□□□□□ -0.21
HCFC2-202ENST00000544223 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.74□□□□□ -0.21
HCFC2-202ENST00000544223 PROCP04070 461 aa13.74□□□□□ -0.21
HCFC2-202ENST00000544223 PTPN2P17706 415 aa13.74□□□□□ -0.21
HCFC2-202ENST00000544223 MAGEA10P43363 369 aaPredicted RBP13.74□□□□□ -0.21
HCFC2-202ENST00000544223 NRIP1P48552 1158 aa13.74□□□□□ -0.21
HCFC2-202ENST00000544223 SERPINB8P50452 374 aa13.74□□□□□ -0.21
HCFC2-202ENST00000544223 GPM6BQ13491 265 aa13.74□□□□□ -0.21
HCFC2-202ENST00000544223 ITGA9Q13797 1035 aa13.74□□□□□ -0.21
HCFC2-202ENST00000544223 TCEAL5Q5H9L2 206 aa13.74□□□□□ -0.21
HCFC2-202ENST00000544223 TRPM8Q7Z2W7 1104 aa13.74□□□□□ -0.21
HCFC2-202ENST00000544223 GLT6D1Q7Z4J2 308 aa13.74□□□□□ -0.21
HCFC2-202ENST00000544223 CENPLQ8N0S6 344 aaPredicted RBP13.74□□□□□ -0.21
HCFC2-202ENST00000544223 PAF1Q8N7H5 531 aa13.74□□□□□ -0.21
HCFC2-202ENST00000544223 TTC8Q8TAM2 541 aa13.74□□□□□ -0.21
HCFC2-202ENST00000544223 NXNL1Q96CM4 212 aa13.74□□□□□ -0.21
HCFC2-202ENST00000544223 EID2BQ96D98 161 aa13.74□□□□□ -0.21
HCFC2-202ENST00000544223 GPR22Q99680 433 aa13.74□□□□□ -0.21
HCFC2-202ENST00000544223 RHOJQ9H4E5 214 aa13.74□□□□□ -0.21
HCFC2-202ENST00000544223 TASP1Q9H6P5 420 aa13.74□□□□□ -0.21
HCFC2-202ENST00000544223 TDP1Q9NUW8 608 aa13.74□□□□□ -0.21
HCFC2-202ENST00000544223 MYO1CO00159 1063 aa13.74□□□□□ -0.21
HCFC2-202ENST00000544223 ZNF821O75541 412 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms