RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 THADAQ6YHU6 1953 aa14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 E7EVH7 732 aa14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 ZNF500O60304 480 aaPredicted RBP14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 BCKDHBP21953 392 aa14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 RPL22P35268 128 aaKnown RBP14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 FDFT1P37268 417 aa14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 LMAN1P49257 510 aa14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 VPS41P49754 854 aa14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 SUOXP51687 545 aa14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 PTPN5P54829 565 aa14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 WNT3AP56704 352 aa14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 FAM193AP78312 1265 aa14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 CDK18Q07002 472 aa14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 C2orf54Q08AI8 447 aa14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 ELP6Q0PNE2 266 aa14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 GALNT3Q14435 633 aa14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 KCTD19Q17RG1 926 aaPredicted RBP14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 WHAMMP3Q1A5X7 153 aa14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 C4orf22Q6V702 233 aa14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 DEFB119Q8N690 84 aa14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 SPATA4Q8NEY3 305 aa14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 TADA1Q96BN2 335 aa14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 KRT12Q99456 494 aa14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 KCNH6Q9H252 994 aa14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 KDM4CQ9H3R0 1056 aa14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 PCDH12Q9NPG4 1184 aa14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 RAB6BQ9NRW1 208 aa14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 ITM2BQ9Y287 266 aa14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 FADS3Q9Y5Q0 445 aa14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 MRFAP1Q9Y605 127 aa14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 R4GN57 208 aa14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 FANCMQ8IYD8 2048 aa14.57□□□□□ -0.08
TNFRSF1A-216ENST00000543995 FZD6O60353 706 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 LILRB5O75023 590 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 CTPS1P17812 591 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 ITIH2P19823 946 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 TAS2R38P59533 333 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 BASP1P80723 227 aaKnown RBP14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 SIM2Q14190 667 aaPredicted RBP14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 KDELC1Q6UW63 502 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 PRR23BQ6ZRT6 265 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 USP45Q70EL2 814 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 OR2T34Q8NGX1 318 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 PIH1D2Q8WWB5 315 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 ATOH1Q92858 354 aaPredicted RBP14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 FEM1CQ96JP0 617 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 MRGPRX2Q96LB1 330 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 GORASP1Q9BQQ3 440 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 MLPHQ9BV36 600 aaPredicted RBP14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 ETNK1Q9HBU6 452 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 PREBQ9HCU5 417 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 PCYOX1Q9UHG3 505 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 A8MX80 341 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 RIOK3O14730 519 aaKnown RBP14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 PSMD3O43242 534 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 TSPAN6O43657 245 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 AP1G1O43747 822 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 NDST3O95803 873 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 PRLP01236 227 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 CYP2A6P11509 494 aaPredicted RBP14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 GRIA4P48058 902 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 TERF1P54274 439 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 RPL26P61254 145 aaKnown RBP14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 DR1Q01658 176 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 SEMG2Q02383 582 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 GPS1Q13098 491 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 ELF2Q15723 593 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 SYCP2LQ5T4T6 812 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 LPCAT2Q7L5N7 544 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 TMEFF1Q8IYR6 380 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 SLC25A41Q8N5S1 370 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 PDCD7Q8N8D1 485 aaKnown RBP14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 SNX19Q92543 992 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 SPOCK2Q92563 424 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 TRIB3Q96RU7 358 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 FICDQ9BVA6 458 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 C6orf106Q9H6K1 298 aaPredicted RBP14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 GGT7Q9UJ14 662 aa14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 RPL26L1Q9UNX3 145 aaKnown RBP14.56□□□□□ -0.08
TNFRSF1A-216ENST00000543995 A0A0J9YYE9 177 aa14.55□□□□□ -0.08
TNFRSF1A-216ENST00000543995 ANKRD66B4E2M5 251 aa14.55□□□□□ -0.08
TNFRSF1A-216ENST00000543995 AREL1O15033 823 aa14.55□□□□□ -0.08
TNFRSF1A-216ENST00000543995 RNGTTO60942 597 aaKnown RBP14.55□□□□□ -0.08
TNFRSF1A-216ENST00000543995 RHOBTB1O94844 696 aa14.55□□□□□ -0.08
TNFRSF1A-216ENST00000543995 FSBPO95073 299 aa14.55□□□□□ -0.08
TNFRSF1A-216ENST00000543995 AGTP01019 485 aa14.55□□□□□ -0.08
TNFRSF1A-216ENST00000543995 EPOP01588 193 aa14.55□□□□□ -0.08
TNFRSF1A-216ENST00000543995 TRBC1P01850 177 aa14.55□□□□□ -0.08
TNFRSF1A-216ENST00000543995 ALPIP09923 528 aa14.55□□□□□ -0.08
TNFRSF1A-216ENST00000543995 ARHGEF7Q14155 803 aa14.55□□□□□ -0.08
TNFRSF1A-216ENST00000543995 SPARCL1Q14515 664 aa14.55□□□□□ -0.08
TNFRSF1A-216ENST00000543995 KIAA0895LQ68EN5 471 aa14.55□□□□□ -0.08
TNFRSF1A-216ENST00000543995 ARMCX6Q7L4S7 300 aa14.55□□□□□ -0.08
TNFRSF1A-216ENST00000543995 ABCA7Q8IZY2 2146 aa14.55□□□□□ -0.08
TNFRSF1A-216ENST00000543995 CADM4Q8NFZ8 388 aa14.55□□□□□ -0.08
TNFRSF1A-216ENST00000543995 CXorf40AQ8TE69 158 aa14.55□□□□□ -0.08
TNFRSF1A-216ENST00000543995 SLCO2A1Q92959 643 aa14.55□□□□□ -0.08
TNFRSF1A-216ENST00000543995 TBL1YQ9BQ87 522 aa14.55□□□□□ -0.08
TNFRSF1A-216ENST00000543995 APOL2Q9BQE5 337 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms