RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 FCRL5Q96RD9 977 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 WRAP53Q9BUR4 548 aaKnown RBP6.36□□□□□ -1.39
LTBR-212ENST00000543542 MLPHQ9BV36 600 aaPredicted RBP6.36□□□□□ -1.39
LTBR-212ENST00000543542 TDRD1Q9BXT4 1180 aaKnown RBP6.36□□□□□ -1.39
LTBR-212ENST00000543542 DUSP15Q9H1R2 295 aaPredicted RBP6.36□□□□□ -1.39
LTBR-212ENST00000543542 GBA3Q9H227 469 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 KDM4CQ9H3R0 1056 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 SEMA4AQ9H3S1 761 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 PREBQ9HCU5 417 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 PCDH12Q9NPG4 1184 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 PAK5Q9P286 719 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 RNF14Q9UBS8 474 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 FEZ2Q9UHY8 353 aaPredicted RBP6.36□□□□□ -1.39
LTBR-212ENST00000543542 TTC7AQ9ULT0 858 aaPredicted RBP6.36□□□□□ -1.39
LTBR-212ENST00000543542 SMG5Q9UPR3 1016 aaKnown RBP6.36□□□□□ -1.39
LTBR-212ENST00000543542 ITM2BQ9Y287 266 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 DRG1Q9Y295 367 aaKnown RBP6.36□□□□□ -1.39
LTBR-212ENST00000543542 AAR2Q9Y312 384 aaKnown RBP6.36□□□□□ -1.39
LTBR-212ENST00000543542 CACNA1IQ9P0X4 2223 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 C5orf60A6NFR6 353 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 METTL12A8MUP2 240 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 RIOK3O14730 519 aaKnown RBP6.35□□□□□ -1.39
LTBR-212ENST00000543542 PSMD3O43242 534 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 HTRA2O43464 458 aaPredicted RBP6.35□□□□□ -1.39
LTBR-212ENST00000543542 AP1G1O43747 822 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 MMP20O60882 483 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 GCATO75600 419 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 ECEL1O95672 775 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 KRT14P02533 472 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 LMNAP02545 664 aaKnown RBP6.35□□□□□ -1.39
LTBR-212ENST00000543542 MMP2P08253 660 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 PDHA1P08559 390 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 ALPIP09923 528 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 ELFN1P0C7U0 828 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 ETS1P14921 441 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 ITIH2P19823 946 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 MAOBP27338 520 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 VIPR1P32241 457 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 CD68P34810 354 aaPredicted RBP6.35□□□□□ -1.39
LTBR-212ENST00000543542 DEKP35659 375 aaKnown RBP6.35□□□□□ -1.39
LTBR-212ENST00000543542 FDFT1P37268 417 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 COILP38432 576 aaPredicted RBP6.35□□□□□ -1.39
LTBR-212ENST00000543542 NBL1P41271 181 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 DPP6P42658 865 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 PTGER3P43115 390 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 VPS41P49754 854 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 LIG3P49916 1009 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 GDF10P55107 478 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 WNT3AP56704 352 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 RPL26P61254 145 aaKnown RBP6.35□□□□□ -1.39
LTBR-212ENST00000543542 PPP2CBP62714 309 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 RPS21P63220 83 aaKnown RBP6.35□□□□□ -1.39
LTBR-212ENST00000543542 PPP2CAP67775 309 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 BASP1P80723 227 aaKnown RBP6.35□□□□□ -1.39
LTBR-212ENST00000543542 CKAP4Q07065 602 aaKnown RBP6.35□□□□□ -1.39
LTBR-212ENST00000543542 ACOX1Q15067 660 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 SIX1Q15475 284 aaPredicted RBP6.35□□□□□ -1.39
LTBR-212ENST00000543542 TRIP13Q15645 432 aaPredicted RBP6.35□□□□□ -1.39
LTBR-212ENST00000543542 OASLQ15646 514 aaKnown RBP6.35□□□□□ -1.39
LTBR-212ENST00000543542 PARP6Q2NL67 630 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 SETMARQ53H47 684 aaPredicted RBP6.35□□□□□ -1.39
LTBR-212ENST00000543542 SPDYCQ5MJ68 293 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 FAXCQ5TGI0 409 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 ALG1LQ6GMV1 187 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 LAIR1Q6GTX8 287 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 KIAA1161Q6NSJ0 714 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 NEK5Q6P3R8 708 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 DRICH1Q6PGQ1 229 aaPredicted RBP6.35□□□□□ -1.39
LTBR-212ENST00000543542 C4orf22Q6V702 233 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 PPP1R21Q6ZMI0 780 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 NYAP1Q6ZVC0 841 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 HORMAD1Q86X24 394 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 ZSWIM9Q86XI8 627 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 PRELID2Q8N945 189 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 CADM4Q8NFZ8 388 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 KIF18AQ8NI77 898 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 CCHCR1Q8TD31 782 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 BIRC7Q96CA5 298 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 ZNF419Q96HQ0 510 aaPredicted RBP6.35□□□□□ -1.39
LTBR-212ENST00000543542 ZC3H10Q96K80 434 aaKnown RBP6.35□□□□□ -1.39
LTBR-212ENST00000543542 RUNDC3BQ96NL0 473 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 MYOCQ99972 504 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 TBL1YQ9BQ87 522 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 FICDQ9BVA6 458 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 C1QTNF7Q9BXJ2 289 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 GPR63Q9BZJ6 419 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 DDX47Q9H0S4 455 aaKnown RBP6.35□□□□□ -1.39
LTBR-212ENST00000543542 PCED1AQ9H1Q7 454 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 EPC1Q9H2F5 836 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 ARRDC1-AS1Q9H2J1 176 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 USP29Q9HBJ7 922 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 AASDHPPTQ9NRN7 309 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 RAB6BQ9NRW1 208 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 VPS45Q9NRW7 570 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.35□□□□□ -1.39
LTBR-212ENST00000543542 B4GALT6Q9UBX8 382 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 SUSD2Q9UGT4 822 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 EIF2B4Q9UI10 523 aaKnown RBP6.35□□□□□ -1.39
LTBR-212ENST00000543542 GGT7Q9UJ14 662 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 RPL26L1Q9UNX3 145 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms