RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 EVLQ9UI08 416 aaPredicted RBP11.62□□□□□ -0.55
COPS7A-217ENST00000543537 MBD1Q9UIS9 605 aaPredicted RBP11.62□□□□□ -0.55
COPS7A-217ENST00000543537 NOVA2Q9UNW9 492 aaKnown RBP11.62□□□□□ -0.55
COPS7A-217ENST00000543537 NUP205Q92621 2012 aa11.62□□□□□ -0.55
COPS7A-217ENST00000543537 A0A1B0GVM2 712 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 TCAF2A6NFQ2 919 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 DFFAO00273 331 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 MSI1O43347 362 aaKnown RBP11.61□□□□□ -0.55
COPS7A-217ENST00000543537 MAFKO60675 156 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 SHOX2O60902 331 aaPredicted RBP11.61□□□□□ -0.55
COPS7A-217ENST00000543537 ZNF217O75362 1048 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 METTL18O95568 372 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 JCHAINP01591 159 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 INHBAP08476 426 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 PGAM1P18669 254 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 CA4P22748 312 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 PRKCHP24723 683 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 SLC20A2Q08357 652 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 SLC12A1Q13621 1099 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 GEN1Q17RS7 908 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 AASDHQ4L235 1098 aaPredicted RBP11.61□□□□□ -0.55
COPS7A-217ENST00000543537 MPPE1Q53F39 396 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 TTMPQ5BVD1 217 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 SPANXN3Q5MJ09 141 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 PIK3R6Q5UE93 754 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 ADGRD1Q6QNK2 874 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 SLC36A4Q6YBV0 504 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 LPCAT2Q7L5N7 544 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 SLC26A11Q86WA9 606 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 TEX26Q8N6G2 289 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 HMGB4Q8WW32 186 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 ARHGEF2Q92974 986 aaKnown RBP11.61□□□□□ -0.55
COPS7A-217ENST00000543537 ARL8AQ96BM9 186 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 SGSM3Q96HU1 749 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 SRPK1Q96SB4 655 aaKnown RBP11.61□□□□□ -0.55
COPS7A-217ENST00000543537 SP110Q9HB58 689 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 GLOD4Q9HC38 313 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 ZDHHC4Q9NPG8 344 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 RXFP3Q9NSD7 469 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 ELOVL2Q9NXB9 296 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 NKIRAS1Q9NYS0 192 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 SEPT10Q9P0V9 454 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 VANGL2Q9ULK5 521 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 THADAQ6YHU6 1953 aa11.61□□□□□ -0.55
COPS7A-217ENST00000543537 DCDC2BA2VCK2 349 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 RASA4BC9J798 803 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 I6L893 689 aaPredicted RBP11.6□□□□□ -0.55
COPS7A-217ENST00000543537 RASA4O43374 803 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 TMEM63AO94886 807 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 HMBSP08397 361 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 VAV1P15498 845 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 PAMP19021 973 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 NDUFV2P19404 249 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 MDH1P40925 334 aaKnown RBP11.6□□□□□ -0.55
COPS7A-217ENST00000543537 ELK3P41970 407 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 POLD2P49005 469 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 MAGOHP61326 146 aaKnown RBP11.6□□□□□ -0.55
COPS7A-217ENST00000543537 CREB5Q02930 508 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 SERINC3Q13530 473 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 FAM133BQ5BKY9 247 aaKnown RBP11.6□□□□□ -0.55
COPS7A-217ENST00000543537 STPG1Q5TH74 334 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 TMEM215Q68D42 235 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 KIAA1211LQ6NV74 962 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 CAND1Q86VP6 1230 aaKnown RBP11.6□□□□□ -0.55
COPS7A-217ENST00000543537 SPATS2Q86XZ4 545 aaKnown RBP11.6□□□□□ -0.55
COPS7A-217ENST00000543537 SYT12Q8IV01 421 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 ARHGAP12Q8IWW6 846 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 LMNTD2Q8IXW0 634 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 DNAAF3Q8N9W5 541 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 HJURPQ8NCD3 748 aaPredicted RBP11.6□□□□□ -0.55
COPS7A-217ENST00000543537 WFIKKN2Q8TEU8 576 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 UCMAQ8WVF2 138 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 SCG3Q8WXD2 468 aaKnown RBP11.6□□□□□ -0.55
COPS7A-217ENST00000543537 RLN3Q8WXF3 142 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 MRGPRX1Q96LB2 322 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 SIGLEC10Q96LC7 697 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 SMC6Q96SB8 1091 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 SLC39A8Q9C0K1 460 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 ARNT2Q9HBZ2 717 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 MRM3Q9HC36 420 aaKnown RBP11.6□□□□□ -0.55
COPS7A-217ENST00000543537 ANLNQ9NQW6 1124 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 RBM22Q9NW64 420 aaKnown RBP eCLIP11.6□□□□□ -0.55
COPS7A-217ENST00000543537 SEPT3Q9UH03 358 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 RABGEF1Q9UJ41 708 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 CLEC4EQ9ULY5 219 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 TBC1D30Q9Y2I9 924 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 STON1Q9Y6Q2 735 aa11.6□□□□□ -0.55
COPS7A-217ENST00000543537 CACNA1EQ15878 2313 aa11.59□□□□□ -0.55
COPS7A-217ENST00000543537 CKAP5Q14008 2032 aa11.59□□□□□ -0.55
COPS7A-217ENST00000543537 ACACBO00763 2458 aa11.59□□□□□ -0.55
COPS7A-217ENST00000543537 TNRC6BQ9UPQ9 1833 aaKnown RBP11.59□□□□□ -0.55
COPS7A-217ENST00000543537 IGHV1OR15-9A0A0B4J2B8 117 aa11.59□□□□□ -0.55
COPS7A-217ENST00000543537 FAM237BA0A1B0GVD1 139 aa11.59□□□□□ -0.55
COPS7A-217ENST00000543537 LNP1A1A4G5 178 aa11.59□□□□□ -0.55
COPS7A-217ENST00000543537 GOLGA8MH3BSY2 632 aa11.59□□□□□ -0.55
COPS7A-217ENST00000543537 ZBTB24O43167 697 aaPredicted RBP11.59□□□□□ -0.55
COPS7A-217ENST00000543537 USP1O94782 785 aa11.59□□□□□ -0.55
COPS7A-217ENST00000543537 LUC7L3O95232 432 aaKnown RBP11.59□□□□□ -0.55
COPS7A-217ENST00000543537 IGLV3-19P01714 112 aa11.59□□□□□ -0.55
COPS7A-217ENST00000543537 KRT15P19012 456 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms