RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 MRPL47Q9HD33 250 aaKnown RBP5.24□□□□□ -1.57
CLIP1-217ENST00000543205 TMEM51Q9NW97 253 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 DDIT4Q9NX09 232 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 SLC12A6Q9UHW9 1150 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 TMEM59LQ9UK28 342 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 FBXL21Q9UKT6 434 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 DUSP12Q9UNI6 340 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 WNT6Q9Y6F9 365 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 TCF20Q9UGU0 1960 aaKnown RBP5.24□□□□□ -1.57
CLIP1-217ENST00000543205 MYO16Q9Y6X6 1858 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 HMX2A2RU54 273 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 M0QYT0 321 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 RTCAO00442 366 aaKnown RBP5.24□□□□□ -1.57
CLIP1-217ENST00000543205 DCXO43602 365 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 IPO7O95373 1038 aaKnown RBP5.24□□□□□ -1.57
CLIP1-217ENST00000543205 NFATC1O95644 943 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 F9P00740 461 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 APOEP02649 317 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 H2AFZP0C0S5 128 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 GPD1P21695 349 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 CORO1AP31146 461 aaKnown RBP5.24□□□□□ -1.57
CLIP1-217ENST00000543205 RFC1P35251 1148 aaPredicted RBP5.24□□□□□ -1.57
CLIP1-217ENST00000543205 MAN2A2P49641 1150 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 GALCP54803 685 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 HSD17B7P56937 341 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 ZXDAP98168 799 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 DEUP1Q05D60 604 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 E2F5Q15329 346 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 NKG7Q16617 165 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 SLC25A52Q3SY17 297 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 C10orf76Q5T2E6 689 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 TRIM68Q6AZZ1 485 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 PLEKHA7Q6IQ23 1121 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 H2AFVQ71UI9 128 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 DENND1CQ8IV53 801 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 LIX1LQ8IVB5 337 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 BBS7Q8IWZ6 715 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 EMC1Q8N766 993 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 FAM13CQ8NE31 585 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 JOSD2Q8TAC2 188 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 RXFP2Q8WXD0 754 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 CTNNBL1Q8WYA6 563 aaPredicted RBP5.24□□□□□ -1.57
CLIP1-217ENST00000543205 DNASE1L2Q92874 299 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 ARL8AQ96BM9 186 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 OTUB2Q96DC9 234 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 CFAP57Q96MR6 1250 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 NPY6RQ99463 290 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 DPH2Q9BQC3 489 aaPredicted RBP5.24□□□□□ -1.57
CLIP1-217ENST00000543205 DDX23Q9BUQ8 820 aaKnown RBP5.24□□□□□ -1.57
CLIP1-217ENST00000543205 THAP2Q9H0W7 228 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 LINC00597Q9H2U6 94 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 EBF3Q9H4W6 596 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 SLC2A4RGQ9NR83 387 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 AGO1Q9UL18 857 aaKnown RBP5.24□□□□□ -1.57
CLIP1-217ENST00000543205 SRPK3Q9UPE1 567 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 PAXBP1Q9Y5B6 917 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 ZNF638Q14966 1978 aaKnown RBP5.24□□□□□ -1.57
CLIP1-217ENST00000543205 A0A1W2PPH5 198 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 TCRBV5S1A1TA0A578 114 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 C2CD4BA6NLJ0 364 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 RHPN2P1A8MT19 583 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 H3BML4 177 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 IRAK2O43187 625 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 DOK2O60496 412 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 MOCS2O96007 188 aaPredicted RBP5.23□□□□□ -1.57
CLIP1-217ENST00000543205 ARSAP15289 507 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 CCR1P32246 355 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 RDXP35241 583 aaKnown RBP5.23□□□□□ -1.57
CLIP1-217ENST00000543205 PTPN9P43378 593 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 SLC11A2P49281 568 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 RPL7AP62424 266 aaKnown RBP5.23□□□□□ -1.57
CLIP1-217ENST00000543205 PITX1P78337 314 aaPredicted RBP5.23□□□□□ -1.57
CLIP1-217ENST00000543205 AMPD2Q01433 879 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 TNK2Q07912 1038 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 FAPQ12884 760 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 CDK5R2Q13319 367 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 MTA1Q13330 715 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 RUNX3Q13761 415 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 SPARCL1Q14515 664 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 PDCD1Q15116 288 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 CNN3Q15417 329 aaKnown RBP5.23□□□□□ -1.57
CLIP1-217ENST00000543205 CDO1Q16878 200 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 ITPRIPL2Q3MIP1 535 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 CCDC14Q49A88 953 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 SLC44A4Q53GD3 710 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 TMEM201Q5SNT2 666 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 ADGRG2Q8IZP9 1017 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 ATP6V0D2Q8N8Y2 350 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 ZNF527Q8NB42 609 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 TMEM145Q8NBT3 493 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 OR8H1Q8NGG4 311 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 WBP2Q969T9 261 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 ASIC4Q96FT7 647 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 C1orf159Q96HA4 380 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 FCRL2Q96LA5 508 aaPredicted RBP5.23□□□□□ -1.57
CLIP1-217ENST00000543205 DDX50Q9BQ39 737 aaKnown RBP5.23□□□□□ -1.57
CLIP1-217ENST00000543205 NUP85Q9BW27 656 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 WDCPQ9H6R7 721 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 ECT2Q9H8V3 914 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 TRPV5Q9NQA5 729 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms