RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 LRRIQ1Q96JM4 1722 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 C7orf26Q96N11 449 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 SEMA3CQ99985 751 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 ZFP14Q9HCL3 533 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 QSOX1O00391 747 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 PIAS1O75925 651 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 LYPLA2O95372 231 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 CTBP1Q13363 440 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 QPRTQ15274 297 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 ZC3H7AQ8IWR0 971 aaKnown RBP13.18□□□□□ -0.3
TNC-212ENST00000542877 PHF10Q8WUB8 498 aaKnown RBP13.18□□□□□ -0.3
TNC-212ENST00000542877 VMP1Q96GC9 406 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 ITCHQ96J02 903 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 CHID1Q9BWS9 393 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 PCDH18Q9HCL0 1135 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 VWA7Q9Y334 891 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 BAZ2BQ9UIF8 2168 aaKnown RBP13.18□□□□□ -0.3
TNC-212ENST00000542877 FFAR3O14843 346 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 GPR42O15529 346 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 BUD23O43709 281 aaKnown RBP13.18□□□□□ -0.3
TNC-212ENST00000542877 NRP2O60462 931 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 COL6A2P12110 1019 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 CES1P23141 567 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 ADCYAP1R1P41586 468 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 PSMD4P55036 377 aaKnown RBP13.18□□□□□ -0.3
TNC-212ENST00000542877 SNRPD1P62314 119 aaKnown RBP13.18□□□□□ -0.3
TNC-212ENST00000542877 MRPS5P82675 430 aaKnown RBP13.18□□□□□ -0.3
TNC-212ENST00000542877 KLF10Q13118 480 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 HGSNATQ68CP4 663 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 BHLHB9Q6PI77 547 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 APTXQ7Z2E3 356 aaKnown RBP13.18□□□□□ -0.3
TNC-212ENST00000542877 POMGNT2Q8NAT1 580 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 FAM81AQ8TBF8 368 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 AKT1S1Q96B36 256 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 FAIM2Q9BWQ8 316 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 SLC39A8Q9C0K1 460 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 THG1LQ9NWX6 298 aaKnown RBP13.18□□□□□ -0.3
TNC-212ENST00000542877 ATXN10Q9UBB4 475 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 FAM198AQ9UFP1 575 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 VPS4AQ9UN37 437 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 TRAF6Q9Y4K3 522 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 SLC22A3O75751 556 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 PPIBP23284 216 aaKnown RBP13.17□□□□□ -0.3
TNC-212ENST00000542877 LSM3P62310 102 aaKnown RBP13.17□□□□□ -0.3
TNC-212ENST00000542877 USP4Q13107 963 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 TRAPPC5Q8IUR0 188 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 TNFRSF25Q93038 417 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 TSPAN18Q96SJ8 248 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 PCDHB18PQ96TA0 734 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 SAMHD1Q9Y3Z3 626 aaKnown RBP13.17□□□□□ -0.3
TNC-212ENST00000542877 MRPL42Q9Y6G3 142 aaKnown RBP13.17□□□□□ -0.3
TNC-212ENST00000542877 ITGAXP20702 1163 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 CDK9P50750 372 aaKnown RBP13.17□□□□□ -0.3
TNC-212ENST00000542877 PSMD5Q16401 504 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 ARSHQ5FYA8 562 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 LRRC52Q8N7C0 313 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 DNAJC28Q9NX36 388 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 DNMT3LQ9UJW3 386 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 KPNA3O00505 521 aaPredicted RBP13.17□□□□□ -0.3
TNC-212ENST00000542877 OR6A2O95222 327 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 FGF1P05230 155 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 POLR2EP19388 210 aaKnown RBP13.17□□□□□ -0.3
TNC-212ENST00000542877 IL12AP29459 219 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 HOXA10P31260 410 aaPredicted RBP13.17□□□□□ -0.3
TNC-212ENST00000542877 SCNN1GP51170 649 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 SRP54P61011 504 aaKnown RBP13.17□□□□□ -0.3
TNC-212ENST00000542877 CATSPERGQ6ZRH7 1159 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 CUZD1Q86UP6 607 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 AP3S1Q92572 193 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 PRDM8Q9NQV8 689 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 LYVE1Q9Y5Y7 322 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 ATRNO75882 1429 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 LINC00032P0C843 101 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 TSPAN8P19075 237 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 LPOP22079 712 aaPredicted RBP13.17□□□□□ -0.3
TNC-212ENST00000542877 ABL2P42684 1182 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 PPP1R15BQ5SWA1 713 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 METTL3Q86U44 580 aaKnown RBP13.17□□□□□ -0.3
TNC-212ENST00000542877 P2RY11Q96G91 374 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 SMIM22K7EJ46 135 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 IDH3BO43837 385 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 PTPRAP18433 802 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 MMP8P22894 467 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 PAGE2Q7Z2X7 111 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 SPATA19Q7Z5L4 167 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 ECHDC2Q86YB7 292 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 OR52K2Q8NGK3 314 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 SOCS4Q8WXH5 440 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 NMUR2Q9GZQ4 415 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 ZDHHC6Q9H6R6 413 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 SSU72Q9NP77 194 aaKnown RBP13.17□□□□□ -0.3
TNC-212ENST00000542877 RAB26Q9ULW5 256 aa13.17□□□□□ -0.3
TNC-212ENST00000542877 ATP6AP2A0A1C7CYW4 349 aa13.16□□□□□ -0.3
TNC-212ENST00000542877 A8MX80 341 aa13.16□□□□□ -0.3
TNC-212ENST00000542877 HAT1O14929 419 aa13.16□□□□□ -0.3
TNC-212ENST00000542877 HMGB3O15347 200 aaKnown RBP13.16□□□□□ -0.3
TNC-212ENST00000542877 ATP6AP2O75787 350 aa13.16□□□□□ -0.3
TNC-212ENST00000542877 CAPN1P07384 714 aa13.16□□□□□ -0.3
TNC-212ENST00000542877 CDH3P22223 829 aa13.16□□□□□ -0.3
TNC-212ENST00000542877 RCVRNP35243 200 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms