RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	AGAP9	Q5VTM2	703 aa		13.01	□□□□□ -0.33
DDX11-223	ENST00000542838	ERMP1	Q7Z2K6	904 aa		13.01	□□□□□ -0.33
DDX11-223	ENST00000542838	SNRNP27	Q8WVK2	155 aa	Known RBP	13.01	□□□□□ -0.33
DDX11-223	ENST00000542838	PGAP3	Q96FM1	320 aa	Predicted RBP	13.01	□□□□□ -0.33
DDX11-223	ENST00000542838	RANBP9	Q96S59	729 aa		13.01	□□□□□ -0.33
DDX11-223	ENST00000542838	ATXN3L	Q9H3M9	355 aa		13.01	□□□□□ -0.33
DDX11-223	ENST00000542838	HACD3	Q9P035	362 aa		13.01	□□□□□ -0.33
DDX11-223	ENST00000542838	AURKC	Q9UQB9	309 aa		13.01	□□□□□ -0.33
DDX11-223	ENST00000542838	OTOF	Q9HC10	1997 aa		13	□□□□□ -0.33
DDX11-223	ENST00000542838	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	13	□□□□□ -0.33
DDX11-223	ENST00000542838	F9	P00740	461 aa		13	□□□□□ -0.33
DDX11-223	ENST00000542838	BMP2	P12643	396 aa		13	□□□□□ -0.33
DDX11-223	ENST00000542838	ATP6V1B2	P21281	511 aa		13	□□□□□ -0.33
DDX11-223	ENST00000542838	NUP107	P57740	925 aa		13	□□□□□ -0.33
DDX11-223	ENST00000542838	CLEC6A	Q6EIG7	209 aa		13	□□□□□ -0.33
DDX11-223	ENST00000542838	TTC33	Q6PID6	262 aa	Predicted RBP	13	□□□□□ -0.33
DDX11-223	ENST00000542838	ZNF786	Q8N393	782 aa		13	□□□□□ -0.33
DDX11-223	ENST00000542838	TFAP2C	Q92754	450 aa		13	□□□□□ -0.33
DDX11-223	ENST00000542838	FCRL5	Q96RD9	977 aa		13	□□□□□ -0.33
DDX11-223	ENST00000542838	OLFM1	Q99784	485 aa		13	□□□□□ -0.33
DDX11-223	ENST00000542838	SMO	Q99835	787 aa		13	□□□□□ -0.33
DDX11-223	ENST00000542838	GLOD4	Q9HC38	313 aa		13	□□□□□ -0.33
DDX11-223	ENST00000542838	FBRSL1	Q9HCM7	1045 aa	Known RBP	13	□□□□□ -0.33
DDX11-223	ENST00000542838	CNGB3	Q9NQW8	809 aa		13	□□□□□ -0.33
DDX11-223	ENST00000542838	EBF1	Q9UH73	591 aa		13	□□□□□ -0.33
DDX11-223	ENST00000542838	MTF2	Q9Y483	593 aa	Predicted RBP	13	□□□□□ -0.33
DDX11-223	ENST00000542838	TRAF6	Q9Y4K3	522 aa		13	□□□□□ -0.33
DDX11-223	ENST00000542838		A0A087WXM4	84 aa		13	□□□□□ -0.33
DDX11-223	ENST00000542838	PMPCB	O75439	489 aa		13	□□□□□ -0.33
DDX11-223	ENST00000542838	LTA4H	P09960	611 aa	Known RBP	13	□□□□□ -0.33
DDX11-223	ENST00000542838	TSPAN8	P19075	237 aa		13	□□□□□ -0.33
DDX11-223	ENST00000542838	STX1B	P61266	288 aa		13	□□□□□ -0.33
DDX11-223	ENST00000542838	ZNF772	Q68DY9	489 aa	Predicted RBP	13	□□□□□ -0.33
DDX11-223	ENST00000542838	C8orf82	Q6P1X6	216 aa	Predicted RBP	13	□□□□□ -0.33
DDX11-223	ENST00000542838	HACD2	Q6Y1H2	254 aa		13	□□□□□ -0.33
DDX11-223	ENST00000542838	KLHDC8B	Q8IXV7	354 aa		13	□□□□□ -0.33
DDX11-223	ENST00000542838	ATPAF2	Q8N5M1	289 aa		13	□□□□□ -0.33
DDX11-223	ENST00000542838	FNDC8	Q8TC99	324 aa		13	□□□□□ -0.33
DDX11-223	ENST00000542838	IL1RL2	Q9HB29	575 aa		13	□□□□□ -0.33
DDX11-223	ENST00000542838	CRTAC1	Q9NQ79	661 aa		13	□□□□□ -0.33
DDX11-223	ENST00000542838	ARMC1	Q9NVT9	282 aa		13	□□□□□ -0.33
DDX11-223	ENST00000542838	SFMBT1	Q9UHJ3	866 aa		13	□□□□□ -0.33
DDX11-223	ENST00000542838	HNRNPC	P07910	306 aa	Known RBP eCLIP	12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	DARS	P14868	501 aa	Known RBP	12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	KCNE1	P15382	129 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	CCNC	P24863	283 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	CHRNA4	P43681	627 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	GEM	P55040	296 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	ZNF789	Q5FWF6	425 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	TBCEL	Q5QJ74	424 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	NEPRO	Q6NW34	567 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	DUS1L	Q6P1R4	473 aa	Known RBP	12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	DCLRE1A	Q6PJP8	1040 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	ERO1B	Q86YB8	467 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	CBR4	Q8N4T8	237 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	SHCBP1	Q8NEM2	672 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	FSD1L	Q9BXM9	530 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	OSBPL6	Q9BZF3	934 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	SIK2	Q9H0K1	926 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	VPS45	Q9NRW7	570 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	ZNF236	Q9UL36	1845 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	SEC24D	O94855	1032 aa	Predicted RBP	12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	RBP1	P09455	135 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	GNAO1	P09471	354 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	IGFBP6	P24592	240 aa	Predicted RBP	12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	CXCR3	P49682	368 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	ZNF135	P52742	658 aa	Predicted RBP	12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	PM20D1	Q6GTS8	502 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	KIAA0930	Q6ICG6	404 aa	Predicted RBP	12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	DHRS4L2	Q6PKH6	230 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	FAM35A	Q86V20	835 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	CROCCP3	Q8IVE0	287 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	PCYOX1L	Q8NBM8	494 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	ISOC1	Q96CN7	298 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	RHOBTB2	Q9BYZ6	727 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	PLGRKT	Q9HBL7	147 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	VTA1	Q9NP79	307 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	TREX1	Q9NSU2	369 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	SMOX	Q9NWM0	555 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	CXCL11	O14625	94 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	IMPDH2	P12268	514 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	UGT1A6	P19224	532 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	ENTPD1	P49961	510 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	NME5	P56597	212 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	KIF19	Q2TAC6	998 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	KCTD21	Q4G0X4	260 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	IRAK1BP1	Q5VVH5	260 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	TRIM74	Q86UV6	250 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	TRIM73	Q86UV7	250 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	CAMK1D	Q8IU85	385 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	FUNDC1	Q8IVP5	155 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	RBM12B	Q8IXT5	1001 aa	Known RBP	12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	KLHL23	Q8NBE8	558 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	ZMIZ2	Q8NF64	920 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	PTCD2	Q8WV60	388 aa	Known RBP	12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	EMID1	Q96A84	441 aa	Predicted RBP	12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	ZNF419	Q96HQ0	510 aa	Predicted RBP	12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	LRCH3	Q96II8	777 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	DCUN1D5	Q9BTE7	237 aa		12.99	□□□□□ -0.33

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