RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 SEC31AO94979 1220 aaKnown RBP23.26■■□□□ 1.31
HOMER3-205ENST00000542541 FGF1P05230 155 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 HOXA6P31267 233 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 GUCY2DQ02846 1103 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 PPP1R21Q6ZMI0 780 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 C1orf210Q8IVY1 113 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 DTWD2Q8NBA8 298 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 MDGA1Q8NFP4 955 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 ARNT2Q9HBZ2 717 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 ANAPC5Q9UJX4 755 aa23.26■■□□□ 1.31
HOMER3-205ENST00000542541 UPK3BL1B0FP48 263 aa23.25■■□□□ 1.31
HOMER3-205ENST00000542541 UPK3BL2E5RIL1 263 aa23.25■■□□□ 1.31
HOMER3-205ENST00000542541 ZNF217O75362 1048 aa23.25■■□□□ 1.31
HOMER3-205ENST00000542541 RNASEH2AO75792 299 aaKnown RBP23.25■■□□□ 1.31
HOMER3-205ENST00000542541 TIMP2P16035 220 aa23.25■■□□□ 1.31
HOMER3-205ENST00000542541 METAP1P53582 386 aa23.25■■□□□ 1.31
HOMER3-205ENST00000542541 CNTN1Q12860 1018 aa23.25■■□□□ 1.31
HOMER3-205ENST00000542541 PARS2Q7L3T8 475 aaKnown RBP23.25■■□□□ 1.31
HOMER3-205ENST00000542541 SLC25A41Q8N5S1 370 aa23.25■■□□□ 1.31
HOMER3-205ENST00000542541 AADATQ8N5Z0 425 aa23.25■■□□□ 1.31
HOMER3-205ENST00000542541 NAT8LQ8N9F0 302 aa23.25■■□□□ 1.31
HOMER3-205ENST00000542541 MCUQ8NE86 351 aa23.25■■□□□ 1.31
HOMER3-205ENST00000542541 SRPK1Q96SB4 655 aaKnown RBP23.25■■□□□ 1.31
HOMER3-205ENST00000542541 C11orf16Q9NQ32 467 aa23.25■■□□□ 1.31
HOMER3-205ENST00000542541 ITM2CQ9NQX7 267 aa23.25■■□□□ 1.31
HOMER3-205ENST00000542541 DMGDHQ9UI17 866 aaKnown RBP23.25■■□□□ 1.31
HOMER3-205ENST00000542541 FZD4Q9ULV1 537 aa23.25■■□□□ 1.31
HOMER3-205ENST00000542541 SHOC2Q9UQ13 582 aa23.25■■□□□ 1.31
HOMER3-205ENST00000542541 PPIL1Q9Y3C6 166 aa23.25■■□□□ 1.31
HOMER3-205ENST00000542541 A0A1W2PP55 124 aa23.24■■□□□ 1.31
HOMER3-205ENST00000542541 SLC7A4O43246 635 aa23.24■■□□□ 1.31
HOMER3-205ENST00000542541 USP12O75317 370 aa23.24■■□□□ 1.31
HOMER3-205ENST00000542541 RHOXF2BP0C7M4 288 aa23.24■■□□□ 1.31
HOMER3-205ENST00000542541 ADRB3P13945 408 aa23.24■■□□□ 1.31
HOMER3-205ENST00000542541 AVPR2P30518 371 aa23.24■■□□□ 1.31
HOMER3-205ENST00000542541 DRD3P35462 400 aa23.24■■□□□ 1.31
HOMER3-205ENST00000542541 P2RY2P41231 377 aa23.24■■□□□ 1.31
HOMER3-205ENST00000542541 CAV1Q03135 178 aa23.24■■□□□ 1.31
HOMER3-205ENST00000542541 CDH17Q12864 832 aa23.24■■□□□ 1.31
HOMER3-205ENST00000542541 GALNT3Q14435 633 aa23.24■■□□□ 1.31
HOMER3-205ENST00000542541 SIRPB2Q5JXA9 342 aa23.24■■□□□ 1.31
HOMER3-205ENST00000542541 ERAP2Q6P179 960 aa23.24■■□□□ 1.31
HOMER3-205ENST00000542541 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.24■■□□□ 1.31
HOMER3-205ENST00000542541 USP45Q70EL2 814 aa23.24■■□□□ 1.31
HOMER3-205ENST00000542541 ZSWIM9Q86XI8 627 aa23.24■■□□□ 1.31
HOMER3-205ENST00000542541 DNAAF3Q8N9W5 541 aa23.24■■□□□ 1.31
HOMER3-205ENST00000542541 SEC14L1Q92503 715 aa23.24■■□□□ 1.31
HOMER3-205ENST00000542541 SCRN2Q96FV2 425 aa23.24■■□□□ 1.31
HOMER3-205ENST00000542541 APOL2Q9BQE5 337 aa23.24■■□□□ 1.31
HOMER3-205ENST00000542541 RHOXF2Q9BQY4 288 aa23.24■■□□□ 1.31
HOMER3-205ENST00000542541 FRMD8Q9BZ67 464 aaPredicted RBP23.24■■□□□ 1.31
HOMER3-205ENST00000542541 EPB41L5Q9HCM4 733 aa23.24■■□□□ 1.31
HOMER3-205ENST00000542541 FAM114A2Q9NRY5 505 aa23.24■■□□□ 1.31
HOMER3-205ENST00000542541 K7ESF4 209 aa23.23■■□□□ 1.31
HOMER3-205ENST00000542541 ATXN1LP0C7T5 689 aaKnown RBP23.23■■□□□ 1.31
HOMER3-205ENST00000542541 ITGA8P53708 1063 aa23.23■■□□□ 1.31
HOMER3-205ENST00000542541 ELP6Q0PNE2 266 aa23.23■■□□□ 1.31
HOMER3-205ENST00000542541 QPCTQ16769 361 aa23.23■■□□□ 1.31
HOMER3-205ENST00000542541 HIBCHQ6NVY1 386 aaPredicted RBP23.23■■□□□ 1.31
HOMER3-205ENST00000542541 UBXN4Q92575 508 aa23.23■■□□□ 1.31
HOMER3-205ENST00000542541 XAB2Q9HCS7 855 aaKnown RBP23.23■■□□□ 1.31
HOMER3-205ENST00000542541 PRMT8Q9NR22 394 aaPredicted RBP23.23■■□□□ 1.31
HOMER3-205ENST00000542541 A0A0J9YYE9 177 aa23.22■■□□□ 1.31
HOMER3-205ENST00000542541 TCRBV7S3A2A0A539 114 aa23.22■■□□□ 1.31
HOMER3-205ENST00000542541 PRR33A8MZF0 331 aa23.22■■□□□ 1.31
HOMER3-205ENST00000542541 GPR37L1O60883 481 aa23.22■■□□□ 1.31
HOMER3-205ENST00000542541 TRBC1P01850 177 aa23.22■■□□□ 1.31
HOMER3-205ENST00000542541 CHRNA4P43681 627 aa23.22■■□□□ 1.31
HOMER3-205ENST00000542541 TPMTP51580 245 aa23.22■■□□□ 1.31
HOMER3-205ENST00000542541 ANKRD22Q5VYY1 191 aa23.22■■□□□ 1.31
HOMER3-205ENST00000542541 IFT20Q8IY31 132 aa23.22■■□□□ 1.31
HOMER3-205ENST00000542541 HINFPQ9BQA5 517 aa23.22■■□□□ 1.31
HOMER3-205ENST00000542541 CASS4Q9NQ75 786 aa23.22■■□□□ 1.31
HOMER3-205ENST00000542541 USP36Q9P275 1121 aaKnown RBP23.22■■□□□ 1.31
HOMER3-205ENST00000542541 CCDC163A0A0D9SF12 145 aa23.22■■□□□ 1.31
HOMER3-205ENST00000542541 CYP2A6P11509 494 aaPredicted RBP23.22■■□□□ 1.31
HOMER3-205ENST00000542541 MLNP12872 115 aa23.22■■□□□ 1.31
HOMER3-205ENST00000542541 OXTRP30559 389 aa23.22■■□□□ 1.31
HOMER3-205ENST00000542541 FAM193AP78312 1265 aa23.22■■□□□ 1.31
HOMER3-205ENST00000542541 OLIG2Q13516 323 aa23.22■■□□□ 1.31
HOMER3-205ENST00000542541 PIP5KL1Q5T9C9 394 aa23.22■■□□□ 1.31
HOMER3-205ENST00000542541 DENND5AQ6IQ26 1287 aa23.22■■□□□ 1.31
HOMER3-205ENST00000542541 LRRC8BQ6P9F7 803 aa23.22■■□□□ 1.31
HOMER3-205ENST00000542541 OR52K1Q8NGK4 314 aa23.22■■□□□ 1.31
HOMER3-205ENST00000542541 FAM131CQ96AQ9 280 aa23.22■■□□□ 1.31
HOMER3-205ENST00000542541 C1QTNF1Q9BXJ1 281 aa23.22■■□□□ 1.31
HOMER3-205ENST00000542541 FAM129AQ9BZQ8 928 aa23.22■■□□□ 1.31
HOMER3-205ENST00000542541 NEUROG2Q9H2A3 272 aa23.22■■□□□ 1.31
HOMER3-205ENST00000542541 PLK4O00444 970 aa23.21■■□□□ 1.31
HOMER3-205ENST00000542541 NEMP1O14524 444 aa23.21■■□□□ 1.31
HOMER3-205ENST00000542541 AXIN1O15169 862 aa23.21■■□□□ 1.31
HOMER3-205ENST00000542541 AP1G1O43747 822 aa23.21■■□□□ 1.31
HOMER3-205ENST00000542541 TMEM63AO94886 807 aa23.21■■□□□ 1.31
HOMER3-205ENST00000542541 IGLV3-19P01714 112 aa23.21■■□□□ 1.31
HOMER3-205ENST00000542541 AGBL4Q5VU57 503 aa23.21■■□□□ 1.31
HOMER3-205ENST00000542541 KMT2EQ8IZD2 1858 aa23.21■■□□□ 1.31
HOMER3-205ENST00000542541 MCCC1Q96RQ3 725 aaPredicted RBP23.21■■□□□ 1.31
HOMER3-205ENST00000542541 MAGEE1Q9HCI5 957 aa23.21■■□□□ 1.31
HOMER3-205ENST00000542541 PCDH12Q9NPG4 1184 aa23.21■■□□□ 1.31
HOMER3-205ENST00000542541 GRHL1Q9NZI5 618 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms