RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 MMADHCQ9H3L0 296 aaPredicted RBP16.19■□□□□ 0.18
VARS2-212ENST00000542001 VPS45Q9NRW7 570 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 ZDHHC2Q9UIJ5 367 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 PLCH1Q4KWH8 1693 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 TOMM70O94826 608 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 VCLP18206 1134 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 MZF1P28698 734 aaPredicted RBP16.19■□□□□ 0.18
VARS2-212ENST00000542001 CCNG1P51959 295 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 SLC18A2Q05940 514 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 PPP1R8Q12972 351 aaKnown RBP16.19■□□□□ 0.18
VARS2-212ENST00000542001 KRT72Q14CN4 511 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 KCNA10Q16322 511 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 TAPT1Q6NXT6 567 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 DCLRE1AQ6PJP8 1040 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 RBM44Q6ZP01 1051 aaKnown RBP16.19■□□□□ 0.18
VARS2-212ENST00000542001 UTS2BQ765I0 119 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 LPGAT1Q92604 370 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 ASPSCR1Q9BZE9 553 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 SPASTQ9UBP0 616 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 CORO1CQ9ULV4 474 aaPredicted RBP16.19■□□□□ 0.18
VARS2-212ENST00000542001 U3KQV3 271 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 A0A1W2PQ67 120 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 NTRK1P04629 796 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 T-ENOLP0DO92 83 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 HOXD10P28358 340 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 CDH5P33151 784 aaPredicted RBP16.18■□□□□ 0.18
VARS2-212ENST00000542001 THOP1P52888 689 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 MARK2Q7KZI7 788 aaKnown RBP16.18■□□□□ 0.18
VARS2-212ENST00000542001 FBRSL1Q9HCM7 1045 aaKnown RBP16.18■□□□□ 0.18
VARS2-212ENST00000542001 LMCD1Q9NZU5 365 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 PRKAG3Q9UGI9 489 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 KCNH4Q9UQ05 1017 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 PTCH2Q9Y6C5 1203 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 ANKRD36CQ5JPF3 1778 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 CCDC154A6NI56 674 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 CD3EAPO15446 510 aaKnown RBP16.18■□□□□ 0.18
VARS2-212ENST00000542001 HOXA11P31270 313 aaPredicted RBP16.18■□□□□ 0.18
VARS2-212ENST00000542001 INCA1Q0VD86 236 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 FRG1Q14331 258 aaKnown RBP16.18■□□□□ 0.18
VARS2-212ENST00000542001 PLCL1Q15111 1095 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 CPSF6Q16630 551 aaKnown RBP eCLIP16.18■□□□□ 0.18
VARS2-212ENST00000542001 SYTL3Q4VX76 610 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 SPPL2CQ8IUH8 684 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 CRYBG2Q8N1P7 616 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 NSMCE2Q96MF7 247 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 TUBGCP5Q96RT8 1024 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 ARMC7Q9H6L4 198 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 PCDHGB4Q9UN71 923 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 ANKRD6Q9Y2G4 727 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 TNRC6CQ9HCJ0 1690 aaKnown RBP16.18■□□□□ 0.18
VARS2-212ENST00000542001 SLX4Q8IY92 1834 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 LRATO95237 230 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 HLA-DQB2P05538 268 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 CKMT2P17540 419 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 ATP5C1P36542 298 aaKnown RBP16.18■□□□□ 0.18
VARS2-212ENST00000542001 VAC14Q08AM6 782 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 INTS6LQ5JSJ4 861 aaKnown RBP16.18■□□□□ 0.18
VARS2-212ENST00000542001 OTULINQ96BN8 352 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 CYLDQ9NQC7 956 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 ADAM28Q9UKQ2 775 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 SLC8A2Q9UPR5 921 aa16.18■□□□□ 0.18
VARS2-212ENST00000542001 DDX60LQ5H9U9 1706 aaKnown RBP16.17■□□□□ 0.18
VARS2-212ENST00000542001 C15orf38-AP3S2A0A0A6YYH1 394 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 CYBBP04839 570 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 CHN2P52757 468 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 RPS24P62847 133 aaKnown RBP16.17■□□□□ 0.18
VARS2-212ENST00000542001 LRRC73Q5JTD7 316 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 WLSQ5T9L3 541 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 FAM151BQ6UXP7 276 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 ARPINQ7Z6K5 226 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 PCSK9Q8NBP7 692 aaKnown RBP16.17■□□□□ 0.18
VARS2-212ENST00000542001 ARRDC4Q8NCT1 418 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 GRIN3AQ8TCU5 1115 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 RMND5BQ96G75 393 aaPredicted RBP16.17■□□□□ 0.18
VARS2-212ENST00000542001 PCDHB12Q9Y5F1 795 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 ARL5AQ9Y689 179 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 ADAMTS7Q9UKP4 1686 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 LINC00854A0A1B0GVQ3 168 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 ZBTB14O43829 449 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 CLDN10P78369 228 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 POTEHQ6S545 545 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 UTP4Q969X6 686 aaKnown RBP16.17■□□□□ 0.18
VARS2-212ENST00000542001 PHF12Q96QT6 1004 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 MYH9P35579 1960 aaKnown RBP16.17■□□□□ 0.18
VARS2-212ENST00000542001 BTAF1O14981 1849 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 NCK1P16333 377 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 NR4A1P22736 598 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 PSEN1P49768 467 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 PCLAFQ15004 111 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 SAMD4BQ5PRF9 694 aaKnown RBP16.17■□□□□ 0.18
VARS2-212ENST00000542001 PPP1R15BQ5SWA1 713 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 ARMC3Q5W041 872 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 SPRYD7Q5W111 196 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 GPR141Q7Z602 305 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 RP9Q8TA86 221 aaKnown RBP16.17■□□□□ 0.18
VARS2-212ENST00000542001 ASB8Q9H765 288 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 PARVBQ9HBI1 364 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 GKN1Q9NS71 199 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 SEPT3Q9UH03 358 aa16.17■□□□□ 0.18
VARS2-212ENST00000542001 GNEQ9Y223 722 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms