RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 TRAF3IP3Q9Y228 551 aa5.68□□□□□ -1.5
CPSF7-220ENST00000541963 ASB3Q9Y575 518 aa5.68□□□□□ -1.5
CPSF7-220ENST00000541963 INSL5Q9Y5Q6 135 aa5.68□□□□□ -1.5
CPSF7-220ENST00000541963 SNX9Q9Y5X1 595 aa5.68□□□□□ -1.5
CPSF7-220ENST00000541963 XIRP2A4UGR9 3374 aa5.68□□□□□ -1.5
CPSF7-220ENST00000541963 PLXNA3P51805 1871 aa5.68□□□□□ -1.5
CPSF7-220ENST00000541963 SPTBN5Q9NRC6 3674 aaKnown RBP5.68□□□□□ -1.5
CPSF7-220ENST00000541963 REV3LO60673 3130 aa5.68□□□□□ -1.5
CPSF7-220ENST00000541963 TMEM221A6NGB7 291 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 M0R296 226 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 PPEF2O14830 753 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 IKBKBO14920 756 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 CETN3O15182 167 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 MAPK13O15264 365 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 FOXS1O43638 330 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 STX10O60499 249 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 UNC5CO95185 931 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 SEC24AO95486 1093 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 NR3C1P04150 777 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 GRPP07492 148 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 RHOP08100 348 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 P4HA1P13674 534 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 TNFSF4P23510 183 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 PSMC2P35998 433 aaKnown RBP5.67□□□□□ -1.5
CPSF7-220ENST00000541963 CHN2P52757 468 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 ARFIP2P53365 341 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 TNNC1P63316 161 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 ENPEPQ07075 957 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 ZNF844Q08AG5 666 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 TWF1Q12792 350 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 BIRC3Q13489 604 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 MAPRE1Q15691 268 aaKnown RBP5.67□□□□□ -1.5
CPSF7-220ENST00000541963 ZRSR2Q15696 482 aaKnown RBP5.67□□□□□ -1.5
CPSF7-220ENST00000541963 NFIL3Q16649 462 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 MGAT5BQ3V5L5 792 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 SLC39A12Q504Y0 691 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 FAM209BQ5JX69 171 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 ZNF658Q5TYW1 1059 aaPredicted RBP5.67□□□□□ -1.5
CPSF7-220ENST00000541963 TAF3Q5VWG9 929 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 IZUMO3Q5VZ72 239 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 WSCD1Q658N2 575 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 CENPPQ6IPU0 288 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 GUF1Q8N442 669 aaKnown RBP5.67□□□□□ -1.5
CPSF7-220ENST00000541963 KIAA0895Q8NCT3 520 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 CCDC150Q8NCX0 1101 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 SYAP1Q96A49 352 aaPredicted RBP5.67□□□□□ -1.5
CPSF7-220ENST00000541963 TRIM44Q96DX7 344 aaPredicted RBP5.67□□□□□ -1.5
CPSF7-220ENST00000541963 ZC3H10Q96K80 434 aaKnown RBP5.67□□□□□ -1.5
CPSF7-220ENST00000541963 SGCZQ96LD1 299 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 NAP1L5Q96NT1 182 aaPredicted RBP5.67□□□□□ -1.5
CPSF7-220ENST00000541963 PGLYRP2Q96PD5 576 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 MMS19Q96T76 1030 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 PRRX2Q99811 253 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 ARPC5LQ9BPX5 153 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 GPR87Q9BY21 358 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 MTMR12Q9C0I1 747 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 ZCWPW1Q9H0M4 648 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 XYLT2Q9H1B5 865 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 SNX25Q9H3E2 840 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 MFSD1Q9H3U5 465 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 GOLPH3LQ9H4A5 285 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 ASAH2Q9NR71 780 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 DMAC2Q9NW81 257 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 DDX43Q9NXZ2 648 aaKnown RBP5.67□□□□□ -1.5
CPSF7-220ENST00000541963 GDE1Q9NZC3 331 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 DNMT3BQ9UBC3 853 aaKnown RBP5.67□□□□□ -1.5
CPSF7-220ENST00000541963 EIF2B4Q9UI10 523 aaKnown RBP5.67□□□□□ -1.5
CPSF7-220ENST00000541963 CDH22Q9UJ99 828 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 SLC45A2Q9UMX9 530 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 VWA8A3KMH1 1905 aa5.67□□□□□ -1.5
CPSF7-220ENST00000541963 ANK1P16157 1881 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 MTMR11A4FU01 709 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 DIRC3C9JPN6 131 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 M0QYG6 137 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 THAP12O43422 761 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 OR4Q2P0C623 313 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 HAPLN1P10915 354 aaPredicted RBP5.66□□□□□ -1.5
CPSF7-220ENST00000541963 EPB41P11171 864 aaKnown RBP5.66□□□□□ -1.5
CPSF7-220ENST00000541963 MYL4P12829 197 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 ACO1P21399 889 aaKnown RBP5.66□□□□□ -1.5
CPSF7-220ENST00000541963 SLC6A2P23975 617 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 NR2F2P24468 414 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 SERPINB3P29508 390 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 SLC6A4P31645 630 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 GNL1P36915 607 aaPredicted RBP5.66□□□□□ -1.5
CPSF7-220ENST00000541963 MAN2A2P49641 1150 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 VAMP7P51809 220 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 RPL10AP62906 217 aaKnown RBP5.66□□□□□ -1.5
CPSF7-220ENST00000541963 NTHL1P78549 312 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 PNOCQ13519 176 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 SGSM1Q2NKQ1 1148 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 EDRF1Q3B7T1 1238 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 ARHGAP15Q53QZ3 475 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 ZNF667Q5HYK9 610 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 C3orf38Q5JPI3 329 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 SPOCD1Q6ZMY3 1216 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 C4orf50Q6ZRC1 276 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 INTS8Q75QN2 995 aaKnown RBP5.66□□□□□ -1.5
CPSF7-220ENST00000541963 DNAJB7Q7Z6W7 309 aaPredicted RBP5.66□□□□□ -1.5
CPSF7-220ENST00000541963 SPATA2LQ8IUW3 424 aaPredicted RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms