RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 DAOAP59103 153 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 NHSL2Q5HYW2 709 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 FGD3Q5JSP0 725 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 OGFOD2Q6N063 350 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 LRRC52Q8N7C0 313 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 CATSPER1Q8NEC5 780 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 LPPQ93052 612 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 VPS33AQ96AX1 596 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 FBXL8Q96CD0 374 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 KLHL5Q96PQ7 755 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 KIFC1Q9BW19 673 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 RCOR3Q9P2K3 495 aaPredicted RBP10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 VPS28Q9UK41 221 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 FBXW11Q9UKB1 542 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 FBXO5Q9UKT4 447 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 OAZ3Q9UMX2 235 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 ZSCAN9O15535 394 aaPredicted RBP10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 CAPN3P20807 821 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 SLC12A2P55011 1212 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 CDKN2DP55273 166 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 NAA20P61599 178 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 GALNT2Q10471 571 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 IHHQ14623 411 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 RABL3Q5HYI8 236 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 HABP4Q5JVS0 413 aaKnown RBP10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 TBCELQ5QJ74 424 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 DHFR2Q86XF0 187 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 C3orf58Q8NDZ4 430 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 DLG3Q92796 817 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 ITFG2Q969R8 447 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 DCPSQ96C86 337 aaKnown RBP10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 ISOC1Q96CN7 298 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 MAELQ96JY0 434 aaKnown RBP10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 SLC2A13Q96QE2 648 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 CHCHD3Q9NX63 227 aaKnown RBP10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 SLAMF8Q9P0V8 285 aa10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 MARCH4Q9P2E8 410 aaPredicted RBP10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 TSR3Q9UJK0 312 aaKnown RBP10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 MAGED1Q9Y5V3 778 aaPredicted RBP10.42□□□□□ -0.74
CDC42SE1-207ENST00000540998 FZD9O00144 591 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 XPOTO43592 962 aaKnown RBP10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 NRP2O60462 931 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 GPR32O75388 356 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 TOMM70O94826 608 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 SNRPB2P08579 225 aaKnown RBP10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 ALDH3B2P48448 385 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 RPL34P49207 117 aaKnown RBP10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 ARSDP51689 593 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 TXNL4AP83876 142 aaKnown RBP10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 TNK2Q07912 1038 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 PMS2P3Q13401 168 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 USP41Q3LFD5 358 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 ZIK1Q3SY52 487 aaPredicted RBP10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 PYCR3Q53H96 274 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 TTC33Q6PID6 262 aaPredicted RBP10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 ALKAL1Q6UXT8 129 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 BNIPLQ7Z465 357 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 IFNLR1Q8IU57 520 aaPredicted RBP10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 MIPOL1Q8TD10 442 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 ESAMQ96AP7 390 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 HDAC11Q96DB2 347 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 HNRNPABQ99729 332 aaKnown RBP10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 GPRC5DQ9NZD1 345 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 SUCOQ9UBS9 1254 aaKnown RBP10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 VTI1BQ9UEU0 232 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 CD300AQ9UGN4 299 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 UBQLN1Q9UMX0 589 aaKnown RBP10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 MKI67P46013 3256 aaKnown RBP10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 RNF103-CHMP3A0A140T963 221 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 SRP72O76094 671 aaKnown RBP10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 SMPD1P17405 629 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 CD151P48509 253 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 NPY2RP49146 381 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 CDK9P50750 372 aaKnown RBP10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 RPL26P61254 145 aaKnown RBP10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 BNIP3Q12983 259 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 TECRLQ5HYJ1 363 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 LDLRAP1Q5SW96 308 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 NAPEPLDQ6IQ20 393 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 TFAP2DQ7Z6R9 452 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 TTC39CQ8N584 583 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 DNAJB14Q8TBM8 379 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 DDI1Q8WTU0 396 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 TEX37Q96LM6 180 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 TMEM74Q96NL1 305 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 FSD1LQ9BXM9 530 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 PLK2Q9NYY3 685 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 MAP10Q9P2G4 905 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 CROTQ9UKG9 612 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 NRCAMQ92823 1304 aa10.41□□□□□ -0.74
CDC42SE1-207ENST00000540998 TCRBV3S1A0A5B6 114 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 EI24O14681 340 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 H2AFYO75367 372 aaKnown RBP10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 DDNO94850 711 aaPredicted RBP10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 LINC00032P0C843 101 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 ATP5F1P24539 256 aaPredicted RBP10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 CD300CQ08708 224 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 ITKQ08881 620 aa10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 POLD3Q15054 466 aaPredicted RBP10.4□□□□□ -0.74
CDC42SE1-207ENST00000540998 NOL9Q5SY16 702 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms