RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 FPGSQ05932 587 aa9.6□□□□□ -0.87
TTC39C-203ENST00000540918 CDC16Q13042 620 aa9.6□□□□□ -0.87
TTC39C-203ENST00000540918 CLDN19Q8N6F1 224 aa9.6□□□□□ -0.87
TTC39C-203ENST00000540918 PIWIL2Q8TC59 973 aaKnown RBP9.6□□□□□ -0.87
TTC39C-203ENST00000540918 POF1BQ8WVV4 589 aa9.6□□□□□ -0.87
TTC39C-203ENST00000540918 MYLIPQ8WY64 445 aa9.6□□□□□ -0.87
TTC39C-203ENST00000540918 SEPHS2Q99611 448 aa9.6□□□□□ -0.87
TTC39C-203ENST00000540918 ECSITQ9BQ95 431 aa9.6□□□□□ -0.87
TTC39C-203ENST00000540918 BRD9Q9H8M2 597 aa9.6□□□□□ -0.87
TTC39C-203ENST00000540918 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.6□□□□□ -0.87
TTC39C-203ENST00000540918 SH3BP4Q9P0V3 963 aa9.6□□□□□ -0.87
TTC39C-203ENST00000540918 FBXO10Q9UK96 956 aa9.6□□□□□ -0.87
TTC39C-203ENST00000540918 EFR3BQ9Y2G0 817 aa9.6□□□□□ -0.87
TTC39C-203ENST00000540918 C5orf60A6NFR6 353 aa9.6□□□□□ -0.87
TTC39C-203ENST00000540918 SEC22BO75396 215 aa9.6□□□□□ -0.87
TTC39C-203ENST00000540918 CNTFP26441 200 aa9.6□□□□□ -0.87
TTC39C-203ENST00000540918 TAS2R39P59534 338 aa9.6□□□□□ -0.87
TTC39C-203ENST00000540918 TRIP4Q15650 581 aaPredicted RBP9.6□□□□□ -0.87
TTC39C-203ENST00000540918 CLEC6AQ6EIG7 209 aa9.6□□□□□ -0.87
TTC39C-203ENST00000540918 RIPOR1Q6ZS17 1223 aa9.6□□□□□ -0.87
TTC39C-203ENST00000540918 USP45Q70EL2 814 aa9.6□□□□□ -0.87
TTC39C-203ENST00000540918 SUGP1Q8IWZ8 645 aaKnown RBP9.6□□□□□ -0.87
TTC39C-203ENST00000540918 NAT8LQ8N9F0 302 aa9.6□□□□□ -0.87
TTC39C-203ENST00000540918 ZNF461Q8TAF7 563 aa9.6□□□□□ -0.87
TTC39C-203ENST00000540918 APBB2Q92870 758 aa9.6□□□□□ -0.87
TTC39C-203ENST00000540918 TBCDQ9BTW9 1192 aa9.6□□□□□ -0.87
TTC39C-203ENST00000540918 SLC7A5P2Q9GIP4 190 aa9.6□□□□□ -0.87
TTC39C-203ENST00000540918 GBA3Q9H227 469 aa9.6□□□□□ -0.87
TTC39C-203ENST00000540918 ZFYVE1Q9HBF4 777 aa9.6□□□□□ -0.87
TTC39C-203ENST00000540918 ARHGAP26Q9UNA1 814 aa9.6□□□□□ -0.87
TTC39C-203ENST00000540918 VPS9D1Q9Y2B5 631 aa9.6□□□□□ -0.87
TTC39C-203ENST00000540918 A0A1B0GVM2 712 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 TCAF2A6NFQ2 919 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 FFAR2O15552 330 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 LINC00032P0C843 101 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 UBTFL6P0CB48 400 aaPredicted RBP9.59□□□□□ -0.87
TTC39C-203ENST00000540918 LRPAP1P30533 357 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 GPX6P59796 221 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 CYLC2Q14093 348 aaPredicted RBP9.59□□□□□ -0.87
TTC39C-203ENST00000540918 INSCQ1MX18 579 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 LINGO1Q96FE5 620 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 IGSF21Q96ID5 467 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 GPR21Q99679 349 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 HTATIP2Q9BUP3 242 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 ATG10Q9H0Y0 220 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 MIR1-1HGQ9H1L0 117 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 Q9H521 79 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 RXFP1Q9HBX9 757 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 DEC1Q9P2X7 70 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 DDX60LQ5H9U9 1706 aaKnown RBP9.59□□□□□ -0.87
TTC39C-203ENST00000540918 A0A1B0GUL6 1792 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 ZSCAN9O15535 394 aaPredicted RBP9.59□□□□□ -0.87
TTC39C-203ENST00000540918 ADAM12O43184 909 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 NTRK1P04629 796 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 MPOP05164 745 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 APOA4P06727 396 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 LTA4HP09960 611 aaKnown RBP9.59□□□□□ -0.87
TTC39C-203ENST00000540918 GLDCP23378 1020 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 GHRHRQ02643 423 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 GPR17Q13304 367 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 CAMK2GQ13555 558 aaPredicted RBP9.59□□□□□ -0.87
TTC39C-203ENST00000540918 STXBP5Q5T5C0 1151 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 PSRC1Q6PGN9 363 aaPredicted RBP9.59□□□□□ -0.87
TTC39C-203ENST00000540918 CHST9Q7L1S5 443 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 AGGF1Q8N302 714 aaeCLIP9.59□□□□□ -0.87
TTC39C-203ENST00000540918 ARFGAP1Q8N6T3 406 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 CLHC1Q8NHS4 586 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 CSGALNACT1Q8TDX6 532 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 SORCS1Q8WY21 1168 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 GCATO75600 419 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 LRATO95237 230 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 CRABP2P29373 138 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 GPR1P46091 355 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 ABCE1P61221 599 aaKnown RBP9.59□□□□□ -0.87
TTC39C-203ENST00000540918 NRG1Q02297 640 aaPredicted RBP9.59□□□□□ -0.87
TTC39C-203ENST00000540918 PWP1Q13610 501 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 NFYCQ13952 458 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 PDK4Q16654 411 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 CYP1B1Q16678 543 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 MS4A13Q5J8X5 152 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 PPP2R2DQ66LE6 453 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 TRIML2Q8N7C3 387 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 NIPA2Q8N8Q9 360 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 C12orf50Q8NA57 414 aaPredicted RBP9.59□□□□□ -0.87
TTC39C-203ENST00000540918 IGSF8Q969P0 613 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 CDRT15Q96T59 188 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 ING2Q9H160 280 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 DPP7Q9UHL4 492 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 SNX13Q9Y5W8 968 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 KNTC1P50748 2209 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 TIAM2Q8IVF5 1701 aa9.59□□□□□ -0.87
TTC39C-203ENST00000540918 TTC36A6NLP5 189 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 TRPC5OSA6NMA1 111 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 GRXCR1A8MXD5 290 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 MAP3K13O43283 966 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 ENTPD5O75356 428 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 ITPKAP23677 461 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 FOXN2P32314 431 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 PRKG2Q13237 762 aa9.58□□□□□ -0.88
TTC39C-203ENST00000540918 Q6ZVU0 165 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms