RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 FCF1Q9Y324 198 aaKnown RBP10.71□□□□□ -0.69
ATL3-204ENST00000540699 ACACBO00763 2458 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 GOLGA6BA6NDN3 693 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 GOLGA8MH3BSY2 632 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 ZBTB24O43167 697 aaPredicted RBP10.7□□□□□ -0.7
ATL3-204ENST00000540699 TTC4O95801 387 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 JCHAINP01591 159 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 CCNB1P14635 433 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 P2RY2P41231 377 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 MAGEA4P43358 317 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 PXNP49023 591 aaPredicted RBP10.7□□□□□ -0.7
ATL3-204ENST00000540699 ARL4CP56559 192 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 CDK16Q00536 496 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 HNRNPDQ14103 355 aaKnown RBP10.7□□□□□ -0.7
ATL3-204ENST00000540699 FASTKD3Q14CZ7 662 aaKnown RBP10.7□□□□□ -0.7
ATL3-204ENST00000540699 HIF1AQ16665 826 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 MAP7D1Q3KQU3 841 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 ACCSLQ4AC99 568 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 CARD16Q5EG05 197 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 CFAP58Q5T655 872 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 ZNF776Q68DI1 518 aaPredicted RBP10.7□□□□□ -0.7
ATL3-204ENST00000540699 KCTD11Q693B1 232 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 ITPRIPL1Q6GPH6 555 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 PPP1R21Q6ZMI0 780 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 PID1Q7Z2X4 250 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 CAND1Q86VP6 1230 aaKnown RBP10.7□□□□□ -0.7
ATL3-204ENST00000540699 STK40Q8N2I9 435 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 AGGF1Q8N302 714 aaeCLIP10.7□□□□□ -0.7
ATL3-204ENST00000540699 UBLCP1Q8WVY7 318 aaPredicted RBP10.7□□□□□ -0.7
ATL3-204ENST00000540699 GAB3Q8WWW8 586 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 OR8D1Q8WZ84 308 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 FAM131CQ96AQ9 280 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 SIPA1Q96FS4 1042 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 MLPHQ9BV36 600 aaPredicted RBP10.7□□□□□ -0.7
ATL3-204ENST00000540699 SLC6A17Q9H1V8 727 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 SP110Q9HB58 689 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 SAYSD1Q9NPB0 183 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 ITM2CQ9NQX7 267 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 BCCIPQ9P287 314 aaKnown RBP eCLIP10.7□□□□□ -0.7
ATL3-204ENST00000540699 LHX3Q9UBR4 397 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 PPM1HQ9ULR3 514 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 PLAAQ9Y263 795 aa10.7□□□□□ -0.7
ATL3-204ENST00000540699 CACNA1BQ00975 2339 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 CACNA1EQ15878 2313 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 PI4KAP42356 2102 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 PRR5-ARHGAP8B1AHC4 643 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 C10orf142B7Z368 130 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 H3BQF6 201 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 HRO43593 1189 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 RNASEH1O60930 286 aaKnown RBP10.69□□□□□ -0.7
ATL3-204ENST00000540699 ZNF217O75362 1048 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 BANF1O75531 89 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 SUN1O94901 812 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 SYF2O95926 243 aaKnown RBP10.69□□□□□ -0.7
ATL3-204ENST00000540699 ADH1BP00325 375 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 HLA-DQB2P05538 268 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 CTSLP07711 333 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 APRTP07741 180 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 ABHD2P08910 425 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 MLNP12872 115 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 NFKB1P19838 968 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 TGM1P22735 817 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 CSNK1DP48730 415 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 ARHGAP8P85298 464 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 PDIA2Q13087 525 aaKnown RBP10.69□□□□□ -0.7
ATL3-204ENST00000540699 CST6Q15828 149 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 SYCP2LQ5T4T6 812 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 LEKR1Q6ZMV7 388 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 DPY19L3Q6ZPD9 716 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 USP30Q70CQ3 517 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 CENPUQ71F23 418 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 DSG4Q86SJ6 1040 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 ZNF354CQ86Y25 554 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 TMIEQ8NEW7 156 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 OR2AP1Q8NGE2 309 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 LRIG1Q96JA1 1093 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 AGAP3Q96P47 875 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 PSKH2Q96QS6 385 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 FCRL5Q96RD9 977 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 TPSD1Q9BZJ3 242 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 TNKS2Q9H2K2 1166 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 ACBD3Q9H3P7 528 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 PARD6AQ9NPB6 346 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 RSPH14Q9UHP6 348 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 WASF2Q9Y6W5 498 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 KMT2BQ9UMN6 2715 aaPredicted RBP10.69□□□□□ -0.7
ATL3-204ENST00000540699 DOCK9Q9BZ29 2069 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 CHD8Q9HCK8 2581 aa10.69□□□□□ -0.7
ATL3-204ENST00000540699 IGHV1OR15-9A0A0B4J2B8 117 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 ERI2A8K979 691 aaKnown RBP10.68□□□□□ -0.7
ATL3-204ENST00000540699 F5H423 210 aaPredicted RBP10.68□□□□□ -0.7
ATL3-204ENST00000540699 RPP40O75818 363 aaKnown RBP10.68□□□□□ -0.7
ATL3-204ENST00000540699 AP2A1O95782 977 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 PRNPP04156 253 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 SHBGP04278 402 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 TSHRP16473 764 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 CR2P20023 1033 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 C5AR1P21730 350 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 SLC8A1P32418 973 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 GRIA1P42261 906 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms