RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 CALML6Q8TD86 181 aa22.58■■□□□ 1.2
HOMER3-204ENST00000539827 PDCD6IPQ8WUM4 868 aaKnown RBP22.58■■□□□ 1.2
HOMER3-204ENST00000539827 CCT6BQ92526 530 aa22.58■■□□□ 1.2
HOMER3-204ENST00000539827 ELMO2Q96JJ3 720 aa22.58■■□□□ 1.2
HOMER3-204ENST00000539827 MFSD1Q9H3U5 465 aa22.58■■□□□ 1.2
HOMER3-204ENST00000539827 NPHS2Q9NP85 383 aa22.58■■□□□ 1.2
HOMER3-204ENST00000539827 KIAA1522Q9P206 1035 aaPredicted RBP22.58■■□□□ 1.2
HOMER3-204ENST00000539827 NOTCH4Q99466 2003 aa22.58■■□□□ 1.2
HOMER3-204ENST00000539827 BIRC5O15392 142 aa22.57■■□□□ 1.2
HOMER3-204ENST00000539827 SMAD6O43541 496 aaKnown RBP22.57■■□□□ 1.2
HOMER3-204ENST00000539827 CYBBP04839 570 aa22.57■■□□□ 1.2
HOMER3-204ENST00000539827 ALDH3A1P30838 453 aa22.57■■□□□ 1.2
HOMER3-204ENST00000539827 HOXA9P31269 272 aa22.57■■□□□ 1.2
HOMER3-204ENST00000539827 GPATCH11Q8N954 259 aa22.57■■□□□ 1.2
HOMER3-204ENST00000539827 ING5Q8WYH8 240 aa22.57■■□□□ 1.2
HOMER3-204ENST00000539827 RMDN2Q96LZ7 410 aa22.57■■□□□ 1.2
HOMER3-204ENST00000539827 C2orf49Q9BVC5 232 aaPredicted RBP22.57■■□□□ 1.2
HOMER3-204ENST00000539827 KLHL14Q9P2G3 628 aa22.57■■□□□ 1.2
HOMER3-204ENST00000539827 TLK1Q9UKI8 766 aa22.57■■□□□ 1.2
HOMER3-204ENST00000539827 ARIH1Q9Y4X5 557 aaPredicted RBP22.57■■□□□ 1.2
HOMER3-204ENST00000539827 PRAMEF12O95522 483 aa22.56■■□□□ 1.2
HOMER3-204ENST00000539827 HNRNPA1P09651 372 aaKnown RBP eCLIP22.56■■□□□ 1.2
HOMER3-204ENST00000539827 SLC8A1P32418 973 aa22.56■■□□□ 1.2
HOMER3-204ENST00000539827 BST1Q10588 318 aa22.56■■□□□ 1.2
HOMER3-204ENST00000539827 LAMB3Q13751 1172 aa22.56■■□□□ 1.2
HOMER3-204ENST00000539827 SPRED3Q2MJR0 410 aa22.56■■□□□ 1.2
HOMER3-204ENST00000539827 PRSS36Q5K4E3 855 aa22.56■■□□□ 1.2
HOMER3-204ENST00000539827 ZCCHC23Q6ZST2 131 aa22.56■■□□□ 1.2
HOMER3-204ENST00000539827 TRPM8Q7Z2W7 1104 aa22.56■■□□□ 1.2
HOMER3-204ENST00000539827 ADGRD2Q7Z7M1 963 aa22.56■■□□□ 1.2
HOMER3-204ENST00000539827 CLEC14AQ86T13 490 aa22.56■■□□□ 1.2
HOMER3-204ENST00000539827 ZSWIM3Q96MP5 696 aa22.56■■□□□ 1.2
HOMER3-204ENST00000539827 TM6SF2Q9BZW4 377 aa22.56■■□□□ 1.2
HOMER3-204ENST00000539827 ZNF395Q9H8N7 513 aaPredicted RBP22.56■■□□□ 1.2
HOMER3-204ENST00000539827 TDP1Q9NUW8 608 aa22.56■■□□□ 1.2
HOMER3-204ENST00000539827 MARCH4Q9P2E8 410 aaPredicted RBP22.56■■□□□ 1.2
HOMER3-204ENST00000539827 INTS6Q9UL03 887 aaKnown RBP22.56■■□□□ 1.2
HOMER3-204ENST00000539827 GBF1Q92538 1859 aa22.56■■□□□ 1.2
HOMER3-204ENST00000539827 KLF11O14901 512 aa22.56■■□□□ 1.2
HOMER3-204ENST00000539827 GOT2P00505 430 aaKnown RBP22.56■■□□□ 1.2
HOMER3-204ENST00000539827 GSTA1P08263 222 aa22.56■■□□□ 1.2
HOMER3-204ENST00000539827 KCNA4P22459 653 aa22.56■■□□□ 1.2
HOMER3-204ENST00000539827 CSRP3P50461 194 aa22.56■■□□□ 1.2
HOMER3-204ENST00000539827 NSUN2Q08J23 767 aaKnown RBP eCLIP22.56■■□□□ 1.2
HOMER3-204ENST00000539827 ZNF460Q14592 562 aa22.56■■□□□ 1.2
HOMER3-204ENST00000539827 SHHQ15465 462 aa22.56■■□□□ 1.2
HOMER3-204ENST00000539827 ATG16L1Q676U5 607 aa22.56■■□□□ 1.2
HOMER3-204ENST00000539827 RETSATQ6NUM9 610 aa22.56■■□□□ 1.2
HOMER3-204ENST00000539827 KIAA0408Q6ZU52 694 aa22.56■■□□□ 1.2
HOMER3-204ENST00000539827 TMEM25Q86YD3 366 aa22.56■■□□□ 1.2
HOMER3-204ENST00000539827 CEP97Q8IW35 865 aa22.56■■□□□ 1.2
HOMER3-204ENST00000539827 MDGA1Q8NFP4 955 aa22.56■■□□□ 1.2
HOMER3-204ENST00000539827 HCFC2Q9Y5Z7 792 aa22.56■■□□□ 1.2
HOMER3-204ENST00000539827 ANKRD36A6QL64 1941 aa22.56■■□□□ 1.2
HOMER3-204ENST00000539827 CCDC162PA2VCL2 907 aa22.55■■□□□ 1.2
HOMER3-204ENST00000539827 HGSO14964 777 aaPredicted RBP22.55■■□□□ 1.2
HOMER3-204ENST00000539827 RPP40O75818 363 aaKnown RBP22.55■■□□□ 1.2
HOMER3-204ENST00000539827 SLC4A1P02730 911 aa22.55■■□□□ 1.2
HOMER3-204ENST00000539827 ACVR1Q04771 509 aa22.55■■□□□ 1.2
HOMER3-204ENST00000539827 PCLAFQ15004 111 aa22.55■■□□□ 1.2
HOMER3-204ENST00000539827 PTPRRQ15256 657 aa22.55■■□□□ 1.2
HOMER3-204ENST00000539827 PLEKHG6Q3KR16 790 aa22.55■■□□□ 1.2
HOMER3-204ENST00000539827 RBM20Q5T481 1227 aaKnown RBP22.55■■□□□ 1.2
HOMER3-204ENST00000539827 RFWD2Q8NHY2 731 aa22.55■■□□□ 1.2
HOMER3-204ENST00000539827 GABPB2Q8TAK5 448 aaPredicted RBP22.55■■□□□ 1.2
HOMER3-204ENST00000539827 STYXQ8WUJ0 223 aa22.55■■□□□ 1.2
HOMER3-204ENST00000539827 NDNQ99608 321 aa22.55■■□□□ 1.2
HOMER3-204ENST00000539827 LINC00597Q9H2U6 94 aa22.55■■□□□ 1.2
HOMER3-204ENST00000539827 CEBPBP17676 345 aa22.54■■□□□ 1.2
HOMER3-204ENST00000539827 ABL2P42684 1182 aa22.54■■□□□ 1.2
HOMER3-204ENST00000539827 LEPRP48357 1165 aaKnown RBP22.54■■□□□ 1.2
HOMER3-204ENST00000539827 CORO7P57737 925 aa22.54■■□□□ 1.2
HOMER3-204ENST00000539827 RNF43Q68DV7 783 aa22.54■■□□□ 1.2
HOMER3-204ENST00000539827 GLT6D1Q7Z4J2 308 aa22.54■■□□□ 1.2
HOMER3-204ENST00000539827 CILP2Q8IUL8 1156 aa22.54■■□□□ 1.2
HOMER3-204ENST00000539827 SPNS2Q8IVW8 549 aa22.54■■□□□ 1.2
HOMER3-204ENST00000539827 EFHBQ8N7U6 833 aa22.54■■□□□ 1.2
HOMER3-204ENST00000539827 OR6K2Q8NGY2 324 aa22.54■■□□□ 1.2
HOMER3-204ENST00000539827 PPP1R14CQ8TAE6 165 aa22.54■■□□□ 1.2
HOMER3-204ENST00000539827 C10orf82Q8WW14 230 aa22.54■■□□□ 1.2
HOMER3-204ENST00000539827 ZNF707Q96C28 371 aaPredicted RBP22.54■■□□□ 1.2
HOMER3-204ENST00000539827 ABCB8Q9NUT2 735 aa22.54■■□□□ 1.2
HOMER3-204ENST00000539827 ANKRD6Q9Y2G4 727 aa22.54■■□□□ 1.2
HOMER3-204ENST00000539827 YBX2Q9Y2T7 364 aaKnown RBP22.54■■□□□ 1.2
HOMER3-204ENST00000539827 MYOFQ9NZM1 2061 aa22.54■■□□□ 1.2
HOMER3-204ENST00000539827 CRTAMO95727 393 aa22.54■■□□□ 1.2
HOMER3-204ENST00000539827 SLC35E2BP0CK96 405 aa22.54■■□□□ 1.2
HOMER3-204ENST00000539827 TROVE2P10155 538 aaKnown RBP eCLIP22.54■■□□□ 1.2
HOMER3-204ENST00000539827 CTSOP43234 321 aaPredicted RBP22.54■■□□□ 1.2
HOMER3-204ENST00000539827 TAS2R39P59534 338 aa22.54■■□□□ 1.2
HOMER3-204ENST00000539827 CCDC153Q494R4 210 aa22.54■■□□□ 1.2
HOMER3-204ENST00000539827 TAF1BQ53T94 588 aaPredicted RBP22.54■■□□□ 1.2
HOMER3-204ENST00000539827 C10orf107Q8IVU9 208 aa22.54■■□□□ 1.2
HOMER3-204ENST00000539827 TNS4Q8IZW8 715 aa22.54■■□□□ 1.2
HOMER3-204ENST00000539827 C12orf76Q8N812 135 aaPredicted RBP22.54■■□□□ 1.2
HOMER3-204ENST00000539827 LEMD2Q8NC56 503 aa22.54■■□□□ 1.2
HOMER3-204ENST00000539827 KCTD4Q8WVF5 259 aa22.54■■□□□ 1.2
HOMER3-204ENST00000539827 ACDQ96AP0 544 aa22.54■■□□□ 1.2
HOMER3-204ENST00000539827 LMLNQ96KR4 655 aa22.54■■□□□ 1.2
HOMER3-204ENST00000539827 C1QTNF1Q9BXJ1 281 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms