RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 ITGA2BP08514 1039 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 COX4I1P13073 169 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 BMP7P18075 431 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 PPIDQ08752 370 aaKnown RBP6.52□□□□□ -1.37
LSAMP-207ENST00000539563 NOGQ13253 232 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 RSBN1Q5VWQ0 802 aaPredicted RBP6.52□□□□□ -1.37
LSAMP-207ENST00000539563 ZC3H7AQ8IWR0 971 aaKnown RBP6.52□□□□□ -1.37
LSAMP-207ENST00000539563 RTL3Q8N8U3 475 aaKnown RBP6.52□□□□□ -1.37
LSAMP-207ENST00000539563 FNIP1Q8TF40 1166 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 MBOAT7Q96N66 472 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 RNPEPQ9H4A4 650 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 PCDH12Q9NPG4 1184 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 KLHL1Q9NR64 748 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 C15orf41Q9Y2V0 281 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 BBIP1A8MTZ0 92 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 HLA-DQA2P01906 255 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 SHBGP04278 402 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 NR2F1P10589 423 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 ERCC2P18074 760 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 HNRNPH3P31942 346 aaKnown RBP6.51□□□□□ -1.37
LSAMP-207ENST00000539563 TNFSF9P41273 254 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 UGT2B15P54855 530 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 DDR1Q08345 913 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 SPIRE1Q08AE8 756 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 PPP1R26Q5T8A7 1209 aaPredicted RBP6.51□□□□□ -1.37
LSAMP-207ENST00000539563 BEND7Q8N7W2 519 aaPredicted RBP6.51□□□□□ -1.37
LSAMP-207ENST00000539563 PHC3Q8NDX5 983 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 ZSCAN18Q8TBC5 510 aaPredicted RBP6.51□□□□□ -1.37
LSAMP-207ENST00000539563 REXO5Q96IC2 774 aaKnown RBP6.51□□□□□ -1.37
LSAMP-207ENST00000539563 NUAK2Q9H093 628 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 BRD9Q9H8M2 597 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 KCNE2Q9Y6J6 123 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 MYO10Q9HD67 2058 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 GRM6O15303 877 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 CXCL14O95715 111 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 IL1BP01584 269 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 SPATA31C1P0DKV0 1188 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 ALOX12P18054 663 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 STAT5AP42229 794 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 CDC42P60953 191 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 MRPS22P82650 360 aaKnown RBP6.51□□□□□ -1.37
LSAMP-207ENST00000539563 TATDN1Q6P1N9 297 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 FBXO30Q8TB52 745 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 GRIN3AQ8TCU5 1115 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 COPS5Q92905 334 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 RNPEPL1Q9HAU8 725 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 AGO1Q9UL18 857 aaKnown RBP6.51□□□□□ -1.37
LSAMP-207ENST00000539563 SPATA2Q9UM82 520 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 SLC12A4Q9UP95 1085 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 COL14A1Q05707 1796 aaKnown RBP6.51□□□□□ -1.37
LSAMP-207ENST00000539563 MYH1P12882 1939 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 TRAFD1O14545 582 aaPredicted RBP6.51□□□□□ -1.37
LSAMP-207ENST00000539563 TLR5O60602 858 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 COL6A2P12110 1019 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 PRG2P13727 222 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 PRKAG1P54619 331 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 PSMD4P55036 377 aaKnown RBP6.51□□□□□ -1.37
LSAMP-207ENST00000539563 LGALS3BPQ08380 585 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 MTAPQ13126 283 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 NR1D2Q14995 579 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 TOMM20Q15388 145 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 PTPRNQ16849 979 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 DNAJC14Q6Y2X3 702 aaPredicted RBP6.51□□□□□ -1.37
LSAMP-207ENST00000539563 KRT74Q7RTS7 529 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 IRGQQ8WZA9 623 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 LINGO1Q96FE5 620 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 HOPXQ9BPY8 73 aaPredicted RBP6.51□□□□□ -1.37
LSAMP-207ENST00000539563 ACE2Q9BYF1 805 aaPredicted RBP6.51□□□□□ -1.37
LSAMP-207ENST00000539563 FHDC1Q9C0D6 1143 aaPredicted RBP6.51□□□□□ -1.37
LSAMP-207ENST00000539563 NUDT5Q9UKK9 219 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 RPTORQ8N122 1335 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 LMO7Q8WWI1 1683 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 MAP2K7O14733 419 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 IRF6O14896 467 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 HDAC3O15379 428 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 GRIA3P42263 894 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 CRADDP78560 199 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 AUHQ13825 339 aaKnown RBP6.51□□□□□ -1.37
LSAMP-207ENST00000539563 BROXQ5VW32 411 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 SERPINA13PQ6UXR4 307 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 LRRC55Q6ZSA7 311 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 TSHZ1Q6ZSZ6 1077 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 IZUMO1Q8IYV9 350 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 ZNF248Q8NDW4 579 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 ZNF671Q8TAW3 534 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 SPPL2BQ8TCT7 592 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 FAXDC2Q96IV6 333 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 HSD17B14Q9BPX1 270 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 RHBDL2Q9NX52 303 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 IKZF3Q9UKT9 509 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 STON1Q9Y6Q2 735 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 TISP43B9A030 160 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 AP3D1O14617 1153 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 SERPINB7O75635 380 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 MYBL2P10244 700 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 TPSB2P20231 275 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 SLC6A2P23975 617 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 ADSSP30520 456 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 TPSAB1Q15661 275 aa6.51□□□□□ -1.37
LSAMP-207ENST00000539563 PSMD5Q16401 504 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms