RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 DHFR2Q86XF0 187 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 SLC22A9Q8IVM8 553 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.73□□□□□ -0.85
CDH13-204ENST00000539548 PACRGLQ8N7B6 248 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 ARRDC4Q8NCT1 418 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 TFAP2CQ92754 450 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 ROPN1LQ96C74 230 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 ZNF512Q96ME7 567 aaPredicted RBP9.73□□□□□ -0.85
CDH13-204ENST00000539548 CIB1Q99828 191 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 RHOBTB2Q9BYZ6 727 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 PRKD2Q9BZL6 878 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 TNFRSF12AQ9NP84 129 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 CHST12Q9NRB3 414 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 DUS2Q9NX74 493 aaKnown RBP9.73□□□□□ -0.85
CDH13-204ENST00000539548 TUBA8Q9NY65 449 aaPredicted RBP9.73□□□□□ -0.85
CDH13-204ENST00000539548 LMCD1Q9NZU5 365 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 FIS1Q9Y3D6 152 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 TRAF6Q9Y4K3 522 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 PLXNB2O15031 1838 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 ADM5C9JUS6 153 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 DFFAO00273 331 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 PLOD2O00469 737 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 MATN3O15232 486 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 PFDN1O60925 122 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 STAMBPO95630 424 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 LTA4HP09960 611 aaKnown RBP9.73□□□□□ -0.85
CDH13-204ENST00000539548 SMPD1P17405 629 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 IMPDH1P20839 514 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 EPHX2P34913 555 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 SNX17Q15036 470 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 PPP1R3AQ16821 1122 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 RANBP10Q6VN20 620 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 CYP2R1Q6VVX0 501 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 LARP4Q71RC2 724 aaKnown RBP eCLIP9.73□□□□□ -0.85
CDH13-204ENST00000539548 LPCAT2Q7L5N7 544 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 PTAR1Q7Z6K3 402 aaPredicted RBP9.73□□□□□ -0.85
CDH13-204ENST00000539548 ARHGAP12Q8IWW6 846 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 MFSD2AQ8NA29 543 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 SMG8Q8ND04 991 aaKnown RBP9.73□□□□□ -0.85
CDH13-204ENST00000539548 NLGN2Q8NFZ4 835 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 GRIN3AQ8TCU5 1115 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 EDEM1Q92611 657 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 DCPSQ96C86 337 aaKnown RBP9.73□□□□□ -0.85
CDH13-204ENST00000539548 PPP1R14BQ96C90 147 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 TSPAN17Q96FV3 270 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 TRMOQ9BU70 441 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 VPS45Q9NRW7 570 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 ARHGEF38Q9NXL2 777 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 MTF2Q9Y483 593 aaPredicted RBP9.73□□□□□ -0.85
CDH13-204ENST00000539548 IPPQ9Y573 584 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 PTCH2Q9Y6C5 1203 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 COL4A4P53420 1690 aaPredicted RBP9.72□□□□□ -0.85
CDH13-204ENST00000539548 MYBPHLA2RUH7 354 aa9.72□□□□□ -0.85
CDH13-204ENST00000539548 MBLAC1A4D2B0 266 aaPredicted RBP9.72□□□□□ -0.85
CDH13-204ENST00000539548 MAFKO60675 156 aa9.72□□□□□ -0.85
CDH13-204ENST00000539548 FGFR3P22607 806 aa9.72□□□□□ -0.85
CDH13-204ENST00000539548 LEPRP48357 1165 aaKnown RBP9.72□□□□□ -0.85
CDH13-204ENST00000539548 LHX1P48742 406 aa9.72□□□□□ -0.85
CDH13-204ENST00000539548 CLCN5P51795 746 aa9.72□□□□□ -0.85
CDH13-204ENST00000539548 NDST2P52849 883 aa9.72□□□□□ -0.85
CDH13-204ENST00000539548 ACAP2Q15057 778 aa9.72□□□□□ -0.85
CDH13-204ENST00000539548 KCTD21Q4G0X4 260 aa9.72□□□□□ -0.85
CDH13-204ENST00000539548 RBM20Q5T481 1227 aaKnown RBP9.72□□□□□ -0.85
CDH13-204ENST00000539548 ZNF280DQ6N043 979 aa9.72□□□□□ -0.85
CDH13-204ENST00000539548 ERMP1Q7Z2K6 904 aa9.72□□□□□ -0.85
CDH13-204ENST00000539548 TMEM86AQ8N2M4 240 aa9.72□□□□□ -0.85
CDH13-204ENST00000539548 FIBCD1Q8N539 461 aa9.72□□□□□ -0.85
CDH13-204ENST00000539548 ATPAF2Q8N5M1 289 aa9.72□□□□□ -0.85
CDH13-204ENST00000539548 LZTR1Q8N653 840 aa9.72□□□□□ -0.85
CDH13-204ENST00000539548 OR6J1Q8NGC5 347 aa9.72□□□□□ -0.85
CDH13-204ENST00000539548 OR2T34Q8NGX1 318 aa9.72□□□□□ -0.85
CDH13-204ENST00000539548 OR2T3Q8NH03 318 aa9.72□□□□□ -0.85
CDH13-204ENST00000539548 CALML6Q8TD86 181 aa9.72□□□□□ -0.85
CDH13-204ENST00000539548 ADAMTS16Q8TE57 1224 aa9.72□□□□□ -0.85
CDH13-204ENST00000539548 ITFG2Q969R8 447 aa9.72□□□□□ -0.85
CDH13-204ENST00000539548 SENP8Q96LD8 212 aa9.72□□□□□ -0.85
CDH13-204ENST00000539548 UBXN10Q96LJ8 280 aa9.72□□□□□ -0.85
CDH13-204ENST00000539548 PPP1R10Q96QC0 940 aaKnown RBP9.72□□□□□ -0.85
CDH13-204ENST00000539548 TCF12Q99081 682 aa9.72□□□□□ -0.85
CDH13-204ENST00000539548 OLFM1Q99784 485 aa9.72□□□□□ -0.85
CDH13-204ENST00000539548 UPF3AQ9H1J1 476 aaKnown RBP9.72□□□□□ -0.85
CDH13-204ENST00000539548 GSTO2Q9H4Y5 243 aa9.72□□□□□ -0.85
CDH13-204ENST00000539548 CYP4F12Q9HCS2 524 aa9.72□□□□□ -0.85
CDH13-204ENST00000539548 CCM2LQ9NUG4 571 aaPredicted RBP9.72□□□□□ -0.85
CDH13-204ENST00000539548 TMEM30AQ9NV96 361 aa9.72□□□□□ -0.85
CDH13-204ENST00000539548 DNAAF2Q9NVR5 837 aaKnown RBP9.72□□□□□ -0.85
CDH13-204ENST00000539548 PTBP2Q9UKA9 531 aaKnown RBP9.72□□□□□ -0.85
CDH13-204ENST00000539548 A0A087WXM4 84 aa9.71□□□□□ -0.85
CDH13-204ENST00000539548 BBIP1A8MTZ0 92 aa9.71□□□□□ -0.85
CDH13-204ENST00000539548 ZNF701M0R085 212 aaPredicted RBP9.71□□□□□ -0.85
CDH13-204ENST00000539548 PTGESO14684 152 aa9.71□□□□□ -0.85
CDH13-204ENST00000539548 AURKAO14965 403 aa9.71□□□□□ -0.85
CDH13-204ENST00000539548 TIPRLO75663 272 aa9.71□□□□□ -0.85
CDH13-204ENST00000539548 SMIM10L2AP0DMW4 78 aa9.71□□□□□ -0.85
CDH13-204ENST00000539548 SMIM10L2BP0DMW5 78 aa9.71□□□□□ -0.85
CDH13-204ENST00000539548 ARSAP15289 507 aa9.71□□□□□ -0.85
CDH13-204ENST00000539548 CKMT2P17540 419 aa9.71□□□□□ -0.85
CDH13-204ENST00000539548 GPX3P22352 226 aa9.71□□□□□ -0.85
CDH13-204ENST00000539548 SLC7A2P52569 658 aa9.71□□□□□ -0.85
CDH13-204ENST00000539548 LPIN1Q14693 890 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 313.9 ms