RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 HCAR2Q8TDS4 363 aa15.86■□□□□ 0.13
RPAIN-206ENST00000539417 PIH1D2Q8WWB5 315 aa15.86■□□□□ 0.13
RPAIN-206ENST00000539417 RAB7BQ96AH8 199 aa15.86■□□□□ 0.13
RPAIN-206ENST00000539417 FEM1CQ96JP0 617 aa15.86■□□□□ 0.13
RPAIN-206ENST00000539417 RBM15Q96T37 977 aaKnown RBP eCLIP15.86■□□□□ 0.13
RPAIN-206ENST00000539417 EDEM2Q9BV94 578 aa15.86■□□□□ 0.13
RPAIN-206ENST00000539417 BRD8Q9H0E9 1235 aa15.86■□□□□ 0.13
RPAIN-206ENST00000539417 IL21RQ9HBE5 538 aa15.86■□□□□ 0.13
RPAIN-206ENST00000539417 CHKBQ9Y259 395 aa15.86■□□□□ 0.13
RPAIN-206ENST00000539417 TRPM6Q9BX84 2022 aa15.86■□□□□ 0.13
RPAIN-206ENST00000539417 GOLGA8CPA6NN73 597 aa15.85■□□□□ 0.13
RPAIN-206ENST00000539417 H7C0C1 242 aa15.85■□□□□ 0.13
RPAIN-206ENST00000539417 NEMP1O14524 444 aa15.85■□□□□ 0.13
RPAIN-206ENST00000539417 ENC1O14682 589 aa15.85■□□□□ 0.13
RPAIN-206ENST00000539417 TSPAN6O43657 245 aa15.85■□□□□ 0.13
RPAIN-206ENST00000539417 SOCS5O75159 536 aa15.85■□□□□ 0.13
RPAIN-206ENST00000539417 PGLSO95336 258 aa15.85■□□□□ 0.13
RPAIN-206ENST00000539417 GNSP15586 552 aa15.85■□□□□ 0.13
RPAIN-206ENST00000539417 CTPS1P17812 591 aa15.85■□□□□ 0.13
RPAIN-206ENST00000539417 GM2AP17900 193 aa15.85■□□□□ 0.13
RPAIN-206ENST00000539417 MAPK8P45983 427 aa15.85■□□□□ 0.13
RPAIN-206ENST00000539417 ATP5OP48047 213 aa15.85■□□□□ 0.13
RPAIN-206ENST00000539417 EIF3EP60228 445 aaKnown RBP15.85■□□□□ 0.13
RPAIN-206ENST00000539417 FAM193AP78312 1265 aa15.85■□□□□ 0.13
RPAIN-206ENST00000539417 CCDC15Q0P6D6 951 aa15.85■□□□□ 0.13
RPAIN-206ENST00000539417 KIF19Q2TAC6 998 aa15.85■□□□□ 0.13
RPAIN-206ENST00000539417 TMEM52BQ4KMG9 183 aa15.85■□□□□ 0.13
RPAIN-206ENST00000539417 TEX44Q53QW1 395 aa15.85■□□□□ 0.13
RPAIN-206ENST00000539417 SLC45A4Q5BKX6 768 aa15.85■□□□□ 0.13
RPAIN-206ENST00000539417 CFAP58Q5T655 872 aa15.85■□□□□ 0.13
RPAIN-206ENST00000539417 ZNF567Q8N184 647 aa15.85■□□□□ 0.13
RPAIN-206ENST00000539417 TEKT5Q96M29 485 aa15.85■□□□□ 0.13
RPAIN-206ENST00000539417 KLF6Q99612 283 aaPredicted RBP15.85■□□□□ 0.13
RPAIN-206ENST00000539417 GTPBP2Q9BX10 602 aaKnown RBP15.85■□□□□ 0.13
RPAIN-206ENST00000539417 C1QTNF2Q9BXJ5 285 aa15.85■□□□□ 0.13
RPAIN-206ENST00000539417 NUSAP1Q9BXS6 441 aaKnown RBP15.85■□□□□ 0.13
RPAIN-206ENST00000539417 SLC17A9Q9BYT1 436 aa15.85■□□□□ 0.13
RPAIN-206ENST00000539417 GLOD4Q9HC38 313 aa15.85■□□□□ 0.13
RPAIN-206ENST00000539417 AASDHPPTQ9NRN7 309 aa15.85■□□□□ 0.13
RPAIN-206ENST00000539417 SUSD2Q9UGT4 822 aa15.85■□□□□ 0.13
RPAIN-206ENST00000539417 AMACRQ9UHK6 382 aa15.85■□□□□ 0.13
RPAIN-206ENST00000539417 SNX11Q9Y5W9 270 aa15.85■□□□□ 0.13
RPAIN-206ENST00000539417 TMEM131Q92545 1883 aa15.85■□□□□ 0.13
RPAIN-206ENST00000539417 TP53BP1Q12888 1972 aaPredicted RBP15.85■□□□□ 0.13
RPAIN-206ENST00000539417 ARHGAP33O14559 1287 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 NEBLO76041 1014 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 TJP3O95049 919 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 MT-CYBP00156 380 aaPredicted RBP15.84■□□□□ 0.13
RPAIN-206ENST00000539417 CPP00450 1065 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 ALPIP09923 528 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 RBP3P10745 1247 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 LHCGRP22888 699 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 XPAP23025 273 aaPredicted RBP15.84■□□□□ 0.13
RPAIN-206ENST00000539417 CXCR5P32302 372 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 LIG3P49916 1009 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 AFF3P51826 1226 aaKnown RBP15.84■□□□□ 0.13
RPAIN-206ENST00000539417 RPS21P63220 83 aaKnown RBP15.84■□□□□ 0.13
RPAIN-206ENST00000539417 RACK1P63244 317 aaKnown RBP15.84■□□□□ 0.13
RPAIN-206ENST00000539417 XRCC4Q13426 336 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 SETMARQ53H47 684 aaPredicted RBP15.84■□□□□ 0.13
RPAIN-206ENST00000539417 PRAMEF14Q5SWL7 426 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 NAPEPLDQ6IQ20 393 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 KIAA1161Q6NSJ0 714 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 GCNT7Q6ZNI0 430 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 BZW1Q7L1Q6 419 aaKnown RBP15.84■□□□□ 0.13
RPAIN-206ENST00000539417 TSPAN33Q86UF1 283 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 GPR161Q8N6U8 529 aaKnown RBP15.84■□□□□ 0.13
RPAIN-206ENST00000539417 TMEM145Q8NBT3 493 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 TRIM58Q8NG06 486 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 HTR3CQ8WXA8 447 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 ATG4AQ8WYN0 398 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 TADA1Q96BN2 335 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 IMP4Q96G21 291 aaKnown RBP15.84■□□□□ 0.13
RPAIN-206ENST00000539417 ALS2CR12Q96Q35 445 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 TDRD1Q9BXT4 1180 aaKnown RBP15.84■□□□□ 0.13
RPAIN-206ENST00000539417 USP29Q9HBJ7 922 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 UBP1Q9NZI7 540 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 B4GALT6Q9UBX8 382 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 POM121BA6NF01 834 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 NPIPB15A6NHN6 443 aaPredicted RBP15.84■□□□□ 0.13
RPAIN-206ENST00000539417 HACD1B0YJ81 288 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 C6P13671 934 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 NFKB1P19838 968 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 DPP6P42658 865 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 CCDC173Q0VFZ6 552 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 KCTD19Q17RG1 926 aaPredicted RBP15.84■□□□□ 0.13
RPAIN-206ENST00000539417 RALGPS1Q5JS13 557 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 ARMC12Q5T9G4 340 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 KDELC2Q7Z4H8 507 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 SPATS2Q86XZ4 545 aaKnown RBP15.84■□□□□ 0.13
RPAIN-206ENST00000539417 SLC13A5Q86YT5 568 aaPredicted RBP15.84■□□□□ 0.13
RPAIN-206ENST00000539417 SLC35F6Q8N357 371 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 PAF1Q8N7H5 531 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 CXorf40AQ8TE69 158 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 SPOCK2Q92563 424 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 BMFQ96LC9 184 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 GORASP1Q9BQQ3 440 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 MBNL1Q9NR56 388 aaKnown RBP15.84■□□□□ 0.13
RPAIN-206ENST00000539417 ANKRD6Q9Y2G4 727 aa15.84■□□□□ 0.13
RPAIN-206ENST00000539417 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms