RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 SEMA4CQ9C0C4 833 aa12.62□□□□□ -0.39
VAMP1-206ENST00000538970 SUV39H2Q9H5I1 410 aa12.62□□□□□ -0.39
VAMP1-206ENST00000538970 GPATCH2LQ9NWQ4 482 aa12.62□□□□□ -0.39
VAMP1-206ENST00000538970 TAS2R14Q9NYV8 317 aa12.62□□□□□ -0.39
VAMP1-206ENST00000538970 AP4E1Q9UPM8 1137 aa12.62□□□□□ -0.39
VAMP1-206ENST00000538970 PMS2P1A4D2B8 440 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 TMEM110-MUSTN1A8MSY1 372 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 BUB1BO60566 1050 aaPredicted RBP12.61□□□□□ -0.39
VAMP1-206ENST00000538970 CCDC172P0C7W6 258 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 DESP17661 470 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 CDK11BP21127 795 aaKnown RBP12.61□□□□□ -0.39
VAMP1-206ENST00000538970 RGRP47804 291 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 LIG3P49916 1009 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 BLKP51451 505 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 HK3P52790 923 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 UCNP55089 124 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 MAMLD1Q13495 774 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 NFATC4Q14934 902 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 CA9Q16790 459 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 BROXQ5VW32 411 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 ESRP1Q6NXG1 681 aaKnown RBP12.61□□□□□ -0.39
VAMP1-206ENST00000538970 ERAP2Q6P179 960 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 BRAT1Q6PJG6 821 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 NYAP1Q6ZVC0 841 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 IRF2BP2Q7Z5L9 587 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 CAMK1DQ8IU85 385 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 ARL10Q8N8L6 244 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 KYQ8NBH2 561 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 PCDH19Q8TAB3 1148 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 WDR48Q8TAF3 677 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 PRR11Q96HE9 360 aaPredicted RBP12.61□□□□□ -0.39
VAMP1-206ENST00000538970 ZNF641Q96N77 438 aaPredicted RBP12.61□□□□□ -0.39
VAMP1-206ENST00000538970 SLC46A1Q96NT5 459 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 PEBP4Q96S96 227 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 EDEM3Q9BZQ6 932 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 SLC39A8Q9C0K1 460 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 DONSONQ9NYP3 566 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 PADI4Q9UM07 663 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 ATP8A1Q9Y2Q0 1164 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 PCDHGA8Q9Y5G5 932 aa12.61□□□□□ -0.39
VAMP1-206ENST00000538970 ARHGAP42A6NI28 874 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 EIF3CLB5ME19 914 aaKnown RBP12.6□□□□□ -0.39
VAMP1-206ENST00000538970 EEF2KO00418 725 aaKnown RBP12.6□□□□□ -0.39
VAMP1-206ENST00000538970 NTN3O00634 580 aaPredicted RBP12.6□□□□□ -0.39
VAMP1-206ENST00000538970 KLK10O43240 276 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 ATMINO43313 823 aaPredicted RBP12.6□□□□□ -0.39
VAMP1-206ENST00000538970 RASGRP1O95267 797 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 PRKCGP05129 697 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 ALPIP09923 528 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 ATP1A3P13637 1013 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 PSMA2P25787 234 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 HTR1BP28222 390 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 RBMS1P29558 406 aaKnown RBP12.6□□□□□ -0.39
VAMP1-206ENST00000538970 CSNK1DP48730 415 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 PAPOLAP51003 745 aaKnown RBP12.6□□□□□ -0.39
VAMP1-206ENST00000538970 SKOR1P84550 965 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 SRSF1Q07955 248 aaKnown RBP eCLIP12.6□□□□□ -0.39
VAMP1-206ENST00000538970 MTM1Q13496 603 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 SPIDRQ14159 915 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 INPP5AQ14642 412 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 ELOCQ15369 112 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 TCEA2Q15560 299 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 CFAP58Q5T655 872 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 AFMIDQ63HM1 303 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 KCTD16Q68DU8 428 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 PLEKHA7Q6IQ23 1121 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 PPP1R2P3Q6NXS1 205 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 LVRNQ6Q4G3 990 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 RFX8Q6ZV50 586 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 HID1Q8IV36 788 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 ARHGAP12Q8IWW6 846 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 ARFGAP1Q8N6T3 406 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 NPWQ8N729 165 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 TSEN2Q8NCE0 465 aaKnown RBP12.6□□□□□ -0.39
VAMP1-206ENST00000538970 TSACCQ96A04 125 aaPredicted RBP12.6□□□□□ -0.39
VAMP1-206ENST00000538970 ECHDC3Q96DC8 303 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 KCTD15Q96SI1 283 aaPredicted RBP12.6□□□□□ -0.39
VAMP1-206ENST00000538970 EIF3CQ99613 913 aaKnown RBP12.6□□□□□ -0.39
VAMP1-206ENST00000538970 APOOQ9BUR5 198 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 SNRNP25Q9BV90 132 aaKnown RBP12.6□□□□□ -0.39
VAMP1-206ENST00000538970 DPH1Q9BZG8 443 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 DHX35Q9H5Z1 703 aaKnown RBP12.6□□□□□ -0.39
VAMP1-206ENST00000538970 SYNDIG1Q9H7V2 258 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 CPNE5Q9HCH3 593 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 PARVAQ9NVD7 372 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 KLQ9UEF7 1012 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 MYO6Q9UM54 1294 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 DOLKQ9UPQ8 538 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 SSUH2Q9Y2M2 353 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 OR1A2Q9Y585 309 aa12.6□□□□□ -0.39
VAMP1-206ENST00000538970 LRP4O75096 1905 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 LRRC53A6NM62 1247 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 CDRT15L2A8MXV6 281 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 TMCO5BA8MYB1 307 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 ERVH48-1M5A8F1 160 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 PCCBP05166 539 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 KRT10P13645 584 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 CTSEP14091 401 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 TNFAIP3P21580 790 aa12.59□□□□□ -0.39
VAMP1-206ENST00000538970 SERPINA4P29622 427 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms