RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 SUOXP51687 545 aa13.3□□□□□ -0.28
COPS7A-207ENST00000538375 KIF19Q2TAC6 998 aa13.3□□□□□ -0.28
COPS7A-207ENST00000538375 RALGPS1Q5JS13 557 aa13.3□□□□□ -0.28
COPS7A-207ENST00000538375 ARMC12Q5T9G4 340 aa13.3□□□□□ -0.28
COPS7A-207ENST00000538375 BBS12Q6ZW61 710 aa13.3□□□□□ -0.28
COPS7A-207ENST00000538375 ZSWIM9Q86XI8 627 aa13.3□□□□□ -0.28
COPS7A-207ENST00000538375 MINDY1Q8N5J2 469 aa13.3□□□□□ -0.28
COPS7A-207ENST00000538375 FATE1Q969F0 183 aa13.3□□□□□ -0.28
COPS7A-207ENST00000538375 OLFM3Q96PB7 478 aa13.3□□□□□ -0.28
COPS7A-207ENST00000538375 ZDHHC5Q9C0B5 715 aa13.3□□□□□ -0.28
COPS7A-207ENST00000538375 GAREM1Q9H706 876 aa13.3□□□□□ -0.28
COPS7A-207ENST00000538375 AMACRQ9UHK6 382 aa13.3□□□□□ -0.28
COPS7A-207ENST00000538375 ATP8A1Q9Y2Q0 1164 aa13.3□□□□□ -0.28
COPS7A-207ENST00000538375 SNX11Q9Y5W9 270 aa13.3□□□□□ -0.28
COPS7A-207ENST00000538375 SHROOM3Q8TF72 1996 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 A0A1W2PQ67 120 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 TSPAN11A1L157 253 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 GOLGA6L9A6NEM1 432 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 TLR4O00206 839 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 TRAFD1O14545 582 aaPredicted RBP13.29□□□□□ -0.28
COPS7A-207ENST00000538375 CDX4O14627 284 aaPredicted RBP13.29□□□□□ -0.28
COPS7A-207ENST00000538375 RIOK3O14730 519 aaKnown RBP13.29□□□□□ -0.28
COPS7A-207ENST00000538375 VILLO15195 856 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 DDX3YO15523 660 aaKnown RBP13.29□□□□□ -0.28
COPS7A-207ENST00000538375 OPHN1O60890 802 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 CPP00450 1065 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 CTPS1P17812 591 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 NFKBIAP25963 317 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 EPHB1P54762 984 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 CLDN2P57739 230 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 IFI35P80217 286 aaPredicted RBP13.29□□□□□ -0.28
COPS7A-207ENST00000538375 NIPAL4Q0D2K0 466 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 TRAF2Q12933 501 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 ZBTB17Q13105 803 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 RPS6KA1Q15418 735 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 HLA-BQ31612 363 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 TMEM52BQ4KMG9 183 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 PRAMEF14Q5SWL7 426 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 DENND2CQ68D51 928 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 IL27RAQ6UWB1 636 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 NDUFAF2Q8N183 169 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 MFSD2AQ8NA29 543 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 KLHDC7BQ96G42 594 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 HES6Q96HZ4 224 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 IL12RB2Q99665 862 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 FAM118BQ9BPY3 351 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 HERPUD2Q9BSE4 406 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 C10orf88Q9H8K7 445 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 PHTF1Q9UMS5 762 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 EFR3BQ9Y2G0 817 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 COQ6Q9Y2Z9 468 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 TNRC6BQ9UPQ9 1833 aaKnown RBP13.29□□□□□ -0.28
COPS7A-207ENST00000538375 SPTBN2O15020 2390 aa13.29□□□□□ -0.28
COPS7A-207ENST00000538375 TPRP12270 2363 aaKnown RBP13.29□□□□□ -0.28
COPS7A-207ENST00000538375 DCDC2BA2VCK2 349 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 APOC4-APOC2K7ER74 178 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 FPGTO14772 594 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 SLC30A4O14863 429 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 SPINT1O43278 529 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 MAGEC1O60732 1142 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 SOCS5O75159 536 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 PGLSO95336 258 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 APOC2P02655 101 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 WNT1P04628 370 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 CA4P22748 312 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 CD86P42081 329 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 LIG3P49916 1009 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 LIMK1P53667 647 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 EIF3EP60228 445 aaKnown RBP13.28□□□□□ -0.28
COPS7A-207ENST00000538375 OTUD4Q01804 1114 aaKnown RBP13.28□□□□□ -0.28
COPS7A-207ENST00000538375 BNC1Q01954 994 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 FGL2Q14314 439 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 PRKD1Q15139 912 aaPredicted RBP13.28□□□□□ -0.28
COPS7A-207ENST00000538375 TMEM259Q4ZIN3 620 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 TEX44Q53QW1 395 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 DARS2Q6PI48 645 aaKnown RBP13.28□□□□□ -0.28
COPS7A-207ENST00000538375 ZNF662Q6ZS27 426 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 PID1Q7Z2X4 250 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 KDELC2Q7Z4H8 507 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 CNTD1Q8N815 330 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 ARRDC2Q8TBH0 407 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 ACTL9Q8TC94 416 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 HTR3CQ8WXA8 447 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 ECHDC3Q96DC8 303 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 FERMT1Q9BQL6 677 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 C1QTNF7Q9BXJ2 289 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 C1QTNF2Q9BXJ5 285 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 IL21RQ9HBE5 538 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 TRMT1Q9NXH9 659 aaKnown RBP13.28□□□□□ -0.28
COPS7A-207ENST00000538375 KLHL8Q9P2G9 620 aaPredicted RBP13.28□□□□□ -0.28
COPS7A-207ENST00000538375 CHKBQ9Y259 395 aa13.28□□□□□ -0.28
COPS7A-207ENST00000538375 A0A1W2PR77 199 aa13.27□□□□□ -0.29
COPS7A-207ENST00000538375 HACD1B0YJ81 288 aa13.27□□□□□ -0.29
COPS7A-207ENST00000538375 C10orf142B7Z368 130 aa13.27□□□□□ -0.29
COPS7A-207ENST00000538375 H0Y8X5 98 aa13.27□□□□□ -0.29
COPS7A-207ENST00000538375 RAD51BO15315 384 aa13.27□□□□□ -0.29
COPS7A-207ENST00000538375 ZSCAN12O43309 604 aa13.27□□□□□ -0.29
COPS7A-207ENST00000538375 MTSS1O43312 755 aa13.27□□□□□ -0.29
COPS7A-207ENST00000538375 HTRA2O43464 458 aaPredicted RBP13.27□□□□□ -0.29
COPS7A-207ENST00000538375 CER1O95813 267 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms