RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 REXO5Q96IC2 774 aaKnown RBP16.9■□□□□ 0.3
SCARB1-205ENST00000538291 ANKRD27Q96NW4 1050 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 MYLK2Q9H1R3 596 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 CLIC5Q9NZA1 410 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 CLDN11O75508 207 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 SNRPB2P08579 225 aaKnown RBP16.9■□□□□ 0.3
SCARB1-205ENST00000538291 TRAF3Q13114 568 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 NDUFAF6Q330K2 333 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 REM2Q8IYK8 340 aaPredicted RBP16.9■□□□□ 0.3
SCARB1-205ENST00000538291 GPR135Q8IZ08 494 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 NAT16Q8N8M0 369 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 GPR152Q8TDT2 470 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 ACMSDQ8TDX5 336 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 SLC38A2Q96QD8 506 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 LMAN2LQ9H0V9 348 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 ZNF780BQ9Y6R6 833 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 DEPDC5O75140 1603 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 HNMTP50135 292 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 NOMO3P69849 1222 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 GRIK5Q16478 980 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 DGUOKQ16854 277 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 CRTC3Q6UUV7 619 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 ENKURQ8TC29 256 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 MYO19Q96H55 970 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 BCL2L14Q9BZR8 327 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 PHPT1Q9NRX4 125 aaPredicted RBP16.9■□□□□ 0.3
SCARB1-205ENST00000538291 COG5Q9UP83 839 aa16.9■□□□□ 0.3
SCARB1-205ENST00000538291 H3BNH8 94 aa16.89■□□□□ 0.3
SCARB1-205ENST00000538291 ATP6V1G2O95670 118 aa16.89■□□□□ 0.3
SCARB1-205ENST00000538291 ARF4P18085 180 aaPredicted RBP16.89■□□□□ 0.3
SCARB1-205ENST00000538291 MC4RP32245 332 aa16.89■□□□□ 0.3
SCARB1-205ENST00000538291 GRIA4P48058 902 aa16.89■□□□□ 0.3
SCARB1-205ENST00000538291 DUSP4Q13115 394 aa16.89■□□□□ 0.3
SCARB1-205ENST00000538291 C9orf57Q5W0N0 161 aa16.89■□□□□ 0.3
SCARB1-205ENST00000538291 ZDHHC20Q5W0Z9 365 aa16.89■□□□□ 0.3
SCARB1-205ENST00000538291 ANKRD23Q86SG2 305 aa16.89■□□□□ 0.3
SCARB1-205ENST00000538291 HEATR4Q86WZ0 1026 aa16.89■□□□□ 0.3
SCARB1-205ENST00000538291 C8orf59Q8N0T1 100 aaPredicted RBP16.89■□□□□ 0.3
SCARB1-205ENST00000538291 KLRG1Q96E93 195 aa16.89■□□□□ 0.3
SCARB1-205ENST00000538291 NXF3Q9H4D5 531 aaKnown RBP16.89■□□□□ 0.3
SCARB1-205ENST00000538291 MTF2Q9Y483 593 aaPredicted RBP16.89■□□□□ 0.3
SCARB1-205ENST00000538291 CNTNAP1P78357 1384 aa16.89■□□□□ 0.3
SCARB1-205ENST00000538291 PRMT3O60678 531 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 GJB1P08034 283 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 BMP7P18075 431 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 ITGB5P18084 799 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 CBX2Q14781 532 aaPredicted RBP16.89■□□□□ 0.29
SCARB1-205ENST00000538291 PPP1R26Q5T8A7 1209 aaPredicted RBP16.89■□□□□ 0.29
SCARB1-205ENST00000538291 TAPT1Q6NXT6 567 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 LRRC74BQ6ZQY2 392 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 OFCC1Q8IZS5 231 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 RNPEPQ9H4A4 650 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 ZNF624Q9P2J8 865 aaPredicted RBP16.89■□□□□ 0.29
SCARB1-205ENST00000538291 SUCOQ9UBS9 1254 aaKnown RBP16.89■□□□□ 0.29
SCARB1-205ENST00000538291 AP3D1O14617 1153 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 SPATA31D3P0C874 917 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 FMO1Q01740 532 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 ATP13A4Q4VNC1 1196 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 MPPE1Q53F39 396 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 POTEHQ6S545 545 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 VSTM1Q6UX27 236 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 GCNT7Q6ZNI0 430 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 SPATA31D4Q6ZUB0 917 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 GPR180Q86V85 440 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 CREG2Q8IUH2 290 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 C12orf50Q8NA57 414 aaPredicted RBP16.89■□□□□ 0.29
SCARB1-205ENST00000538291 KCTD4Q8WVF5 259 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 LGMNQ99538 433 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 INTS7Q9NVH2 962 aaKnown RBP16.89■□□□□ 0.29
SCARB1-205ENST00000538291 FBXO5Q9UKT4 447 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 DISP2A7MBM2 1401 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 PRG2P13727 222 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 WARSP23381 471 aaKnown RBP16.89■□□□□ 0.29
SCARB1-205ENST00000538291 TPP2P29144 1249 aaPredicted RBP16.89■□□□□ 0.29
SCARB1-205ENST00000538291 TREML2Q5T2D2 321 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 SLC25A24Q6NUK1 477 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 AADACL2Q6P093 401 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 FAM151BQ6UXP7 276 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 PHYKPLQ8IUZ5 450 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 C12orf29Q8N999 325 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 EIF1ADQ8N9N8 165 aaKnown RBP16.89■□□□□ 0.29
SCARB1-205ENST00000538291 GLIS3Q8NEA6 775 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 SMG7Q92540 1137 aaKnown RBP16.89■□□□□ 0.29
SCARB1-205ENST00000538291 DNAJC19Q96DA6 116 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 PDE9AO76083 593 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 FARP2O94887 1054 aaPredicted RBP16.89■□□□□ 0.29
SCARB1-205ENST00000538291 PSMD7P51665 324 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 BHLHE22Q8NFJ8 381 aaPredicted RBP16.89■□□□□ 0.29
SCARB1-205ENST00000538291 RDH11Q8TC12 318 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 AENQ8WTP8 325 aaKnown RBP16.89■□□□□ 0.29
SCARB1-205ENST00000538291 ZFRQ96KR1 1074 aaKnown RBP16.89■□□□□ 0.29
SCARB1-205ENST00000538291 EBNA1BP2Q99848 306 aaKnown RBP16.89■□□□□ 0.29
SCARB1-205ENST00000538291 SEMA6AQ9H2E6 1030 aa16.89■□□□□ 0.29
SCARB1-205ENST00000538291 IMP3Q9NV31 184 aaKnown RBP16.89■□□□□ 0.29
SCARB1-205ENST00000538291 H3BQF6 201 aa16.88■□□□□ 0.29
SCARB1-205ENST00000538291 CBX6O95503 412 aa16.88■□□□□ 0.29
SCARB1-205ENST00000538291 SLC24A5Q71RS6 500 aa16.88■□□□□ 0.29
SCARB1-205ENST00000538291 Q96MT0 163 aa16.88■□□□□ 0.29
SCARB1-205ENST00000538291 VPS35Q96QK1 796 aa16.88■□□□□ 0.29
SCARB1-205ENST00000538291 ZMYND8Q9ULU4 1186 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms