RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 NFIL3Q16649 462 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 PXDC1Q5TGL8 231 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 LRRC39Q96DD0 335 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 ACCSQ96QU6 501 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 GON7Q9BXV9 100 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 ARHGAP39Q9C0H5 1083 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 NOCTQ9UK39 431 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 MAGEB16A2A368 324 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 TAL1P17542 331 aaPredicted RBP10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 SLC12A3P55017 1021 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 GALNT3Q14435 633 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 ATAD3CQ5T2N8 411 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 VWA5B1Q5TIE3 1220 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 AGAP6Q5VW22 663 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 GPAT2Q6NUI2 795 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 CPT1BQ92523 772 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 AGAP4Q96P64 663 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 FRMD8P1Q9BZ68 369 aaPredicted RBP10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 PCIF1Q9H4Z3 704 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 TMEM206Q9H813 350 aa10.95□□□□□ -0.66
CLSTN3-207ENST00000537408 ANKRD31Q8N7Z5 1873 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 TBX3O15119 743 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 ABCB7O75027 752 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 BCAS1O75363 584 aaPredicted RBP10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 CYP11B1P15538 503 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 MRPS5P82675 430 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 MTM1Q13496 603 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 DSC3Q14574 896 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 MSS51Q4VC12 460 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 MBLAC2Q68D91 279 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 CXCL17Q6UXB2 119 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 SH2D5Q6ZV89 423 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 DGLUCYQ7Z3D6 616 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 TFAP2DQ7Z6R9 452 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 SLC47A2Q86VL8 602 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 NKD2Q969F2 451 aaPredicted RBP10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 TARS2Q9BW92 718 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 AURKCQ9UQB9 309 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 SOCS2O14508 198 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 TRDMT1O14717 391 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 SHOXO15266 292 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 B4GALT4O60513 344 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 TIPRLO75663 272 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 SEMA3DO95025 777 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 KRT7P08729 469 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 PCNAP12004 261 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 CD19P15391 556 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 FASP25445 335 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 MAPRE2Q15555 327 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 TAF12Q16514 161 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 INTS11Q5TA45 600 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 CYP4A22Q5TCH4 519 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 PIWIL3Q7Z3Z3 882 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 FAM71AQ8IYT1 594 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 SVOPQ8N4V2 548 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 PIK3C3Q8NEB9 887 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 PDCD2LQ9BRP1 358 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 COG4Q9H9E3 785 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 ANKHQ9HCJ1 492 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 IARS2Q9NSE4 1012 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 DUS2Q9NX74 493 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 PAQR5Q9NXK6 330 aaPredicted RBP10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 FARP1Q9Y4F1 1045 aaPredicted RBP10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 PCDHA10Q9Y5I2 948 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 E7ENX8 843 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 ATP6V1G2-DDX39BF2Z307 99 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 H0Y626 953 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 UPK1BO75841 260 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 ALBP02768 609 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 STAG3L1P0CL83 205 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 BMP2P12643 396 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 RPL17P18621 184 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 CNTFP26441 200 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 ALDH7A1P49419 539 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 OR2B6P58173 313 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 PSME3P61289 254 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 PSMC5P62195 406 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 MPP1Q00013 466 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 MROH9Q5TGP6 573 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 ANKRD22Q5VYY1 191 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 MAMDC4Q6UXC1 1216 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 LINC00523Q86TU6 105 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 DEPDC1BQ8WUY9 529 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 FEM1CQ96JP0 617 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 C20orf27Q9GZN8 174 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 SERHL2Q9H4I8 314 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 SCPEP1Q9HB40 452 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 C1orf112Q9NSG2 853 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 KLHL11Q9NVR0 708 aa10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 ZC3H7BQ9UGR2 993 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-207ENST00000537408 SGTAO43765 313 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 GNAO1P09471 354 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 CBX5P45973 191 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 SEPHS1P49903 392 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 MLLT10P55197 1068 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 MLLT6P55198 1093 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 PRKCEQ02156 737 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 GRB14Q14449 540 aa10.93□□□□□ -0.66
CLSTN3-207ENST00000537408 TBCELQ5QJ74 424 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms