RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 GLRA3O75311 464 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ESRRAP11474 423 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 MX2P20592 715 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 FCARP24071 287 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 MAPKAPK2P49137 400 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 POLD3Q15054 466 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TBCCQ15814 346 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 LZTR1Q8N653 840 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 PRR11Q96HE9 360 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 AGAP3Q96P47 875 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 MYADMQ96S97 322 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 GORASP1Q9BQQ3 440 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 NMUR2Q9GZQ4 415 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 POMKQ9H5K3 350 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 STN1Q9H668 368 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 PCMTD2Q9NV79 361 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 DCDC2Q9UHG0 476 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 IPO11Q9UI26 975 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 SORCS3Q9UPU3 1222 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TMEM265A0A087WTH1 108 aa13.06□□□□□ -0.32
CDK5RAP3-202ENST00000536708 H3BQ06 376 aaPredicted RBP13.06□□□□□ -0.32
CDK5RAP3-202ENST00000536708 NCAM2O15394 837 aa13.06□□□□□ -0.32
CDK5RAP3-202ENST00000536708 CLDN11O75508 207 aa13.06□□□□□ -0.32
CDK5RAP3-202ENST00000536708 PSMB4P28070 264 aa13.06□□□□□ -0.32
CDK5RAP3-202ENST00000536708 NDST2P52849 883 aa13.06□□□□□ -0.32
CDK5RAP3-202ENST00000536708 GNA12Q03113 381 aa13.06□□□□□ -0.32
CDK5RAP3-202ENST00000536708 STX3Q13277 289 aa13.06□□□□□ -0.32
CDK5RAP3-202ENST00000536708 CDH18Q13634 790 aa13.06□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ACBD5Q5T8D3 534 aaPredicted RBP13.06□□□□□ -0.32
CDK5RAP3-202ENST00000536708 RINLQ6ZS11 566 aa13.06□□□□□ -0.32
CDK5RAP3-202ENST00000536708 CHST9Q7L1S5 443 aa13.06□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TMEM25Q86YD3 366 aa13.06□□□□□ -0.32
CDK5RAP3-202ENST00000536708 CPXM2Q8N436 756 aa13.06□□□□□ -0.32
CDK5RAP3-202ENST00000536708 PDCD7Q8N8D1 485 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ISL2Q96A47 359 aa13.06□□□□□ -0.32
CDK5RAP3-202ENST00000536708 PABPC5Q96DU9 382 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TMA16Q96EY4 203 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-202ENST00000536708 SPATS2LQ9NUQ6 558 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-202ENST00000536708 LMCD1Q9NZU5 365 aa13.06□□□□□ -0.32
CDK5RAP3-202ENST00000536708 EME2A4GXA9 379 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 NEDD8-MDP1E9PL57 170 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 H0Y626 953 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 MAGEC1O60732 1142 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 PEX11BO96011 259 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 JCHAINP01591 159 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ALDOAP04075 364 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 RHOCP08134 193 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 HOXB8P17481 243 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ATP6V1C1P21283 382 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 MZF1P28698 734 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 CD68P34810 354 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 PEX19P40855 299 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 RAP1GDS1P52306 607 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 OLIG2Q13516 323 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 SERINC3Q13530 473 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 CCDC85BQ15834 202 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 SPANXN3Q5MJ09 141 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 RNF219Q5W0B1 726 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TTC7BQ86TV6 843 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TMPRSS6Q8IU80 811 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 MFN1Q8IWA4 741 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 LMNTD2Q8IXW0 634 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ARHGAP24Q8N264 748 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 CNTD1Q8N815 330 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TTC8Q8TAM2 541 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 SMARCD2Q92925 531 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 MSLNLQ96KJ4 702 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 DDX50Q9BQ39 737 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 C20orf27Q9GZN8 174 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 BRD8Q9H0E9 1235 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 SP110Q9HB58 689 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 KLHL8Q9P2G9 620 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 EMCNQ9ULC0 261 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ZBTB24O43167 697 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 SNAP91O60641 907 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ENTPD5O75356 428 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 GJB3O75712 270 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 HLA-DQB2P05538 268 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 NFKB1P19838 968 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 MGAT1P26572 445 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ETFBP38117 255 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 CSKP41240 450 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 SLC10A7Q0GE19 358 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ZNF177Q13360 481 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 PARP15Q460N3 678 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 LY6G5CQ5SRR4 150 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ANO7Q6IWH7 933 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ALYREFQ86V81 257 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 CELF5Q8N6W0 485 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 MYLIPQ8WY64 445 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TSGA13Q96PP4 275 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 SPON2Q9BUD6 331 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 CCDC106Q9BWC9 280 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 YIPF3Q9GZM5 350 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 MUC3BQ9H195 1237 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TBC1D30Q9Y2I9 924 aa13.05□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TYW5A2RUC4 315 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ARHGAP42A6NI28 874 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms