RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 PCDHA13Q9Y5I0 950 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 TPRP12270 2363 aaKnown RBP14.37□□□□□ -0.11
UBE3B-206ENST00000536398 SPTY2D1-AS1A0A0U1RR47 76 aa14.36□□□□□ -0.11
UBE3B-206ENST00000536398 RCCD1A6NED2 376 aa14.36□□□□□ -0.11
UBE3B-206ENST00000536398 SOWAHDA6NJG2 315 aa14.36□□□□□ -0.11
UBE3B-206ENST00000536398 C1QTNF9BB2RNN3 333 aa14.36□□□□□ -0.11
UBE3B-206ENST00000536398 HTRA2O43464 458 aaPredicted RBP14.36□□□□□ -0.11
UBE3B-206ENST00000536398 DKK1O94907 266 aa14.36□□□□□ -0.11
UBE3B-206ENST00000536398 TRIM16O95361 564 aa14.36□□□□□ -0.11
UBE3B-206ENST00000536398 LDOC1O95751 146 aaPredicted RBP14.36□□□□□ -0.11
UBE3B-206ENST00000536398 C1QTNF9P0C862 333 aa14.36□□□□□ -0.11
UBE3B-206ENST00000536398 MYF5P13349 255 aa14.36□□□□□ -0.11
UBE3B-206ENST00000536398 GM2AP17900 193 aa14.36□□□□□ -0.11
UBE3B-206ENST00000536398 NOP2P46087 812 aaKnown RBP14.36□□□□□ -0.11
UBE3B-206ENST00000536398 RABIFP47224 123 aa14.36□□□□□ -0.11
UBE3B-206ENST00000536398 SUOXP51687 545 aa14.36□□□□□ -0.11
UBE3B-206ENST00000536398 ELP6Q0PNE2 266 aa14.36□□□□□ -0.11
UBE3B-206ENST00000536398 EIF2B5Q13144 721 aaKnown RBP14.36□□□□□ -0.11
UBE3B-206ENST00000536398 IRF4Q15306 451 aa14.36□□□□□ -0.11
UBE3B-206ENST00000536398 ERAP2Q6P179 960 aa14.36□□□□□ -0.11
UBE3B-206ENST00000536398 ZSCAN30Q86W11 494 aa14.36□□□□□ -0.11
UBE3B-206ENST00000536398 PAF1Q8N7H5 531 aa14.36□□□□□ -0.11
UBE3B-206ENST00000536398 PLD5Q8N7P1 536 aa14.36□□□□□ -0.11
UBE3B-206ENST00000536398 DENND6BQ8NEG7 585 aa14.36□□□□□ -0.11
UBE3B-206ENST00000536398 PDCD6IPQ8WUM4 868 aaKnown RBP14.36□□□□□ -0.11
UBE3B-206ENST00000536398 MAML1Q92585 1016 aa14.36□□□□□ -0.11
UBE3B-206ENST00000536398 RNF25Q96BH1 459 aaPredicted RBP14.36□□□□□ -0.11
UBE3B-206ENST00000536398 SMIM14Q96QK8 99 aa14.36□□□□□ -0.11
UBE3B-206ENST00000536398 TMEM121BQ9BXQ6 578 aaPredicted RBP14.36□□□□□ -0.11
UBE3B-206ENST00000536398 TCEAL2Q9H3H9 227 aaPredicted RBP14.36□□□□□ -0.11
UBE3B-206ENST00000536398 DNAJC28Q9NX36 388 aa14.36□□□□□ -0.11
UBE3B-206ENST00000536398 DTLQ9NZJ0 730 aa14.36□□□□□ -0.11
UBE3B-206ENST00000536398 SALL4Q9UJQ4 1053 aa14.36□□□□□ -0.11
UBE3B-206ENST00000536398 A0A0U1RQS6 177 aa14.35□□□□□ -0.11
UBE3B-206ENST00000536398 ENC1O14682 589 aa14.35□□□□□ -0.11
UBE3B-206ENST00000536398 FFAR2O15552 330 aa14.35□□□□□ -0.11
UBE3B-206ENST00000536398 SIGLEC6O43699 453 aa14.35□□□□□ -0.11
UBE3B-206ENST00000536398 LZTS3O60299 673 aaPredicted RBP14.35□□□□□ -0.11
UBE3B-206ENST00000536398 PIAS2O75928 621 aa14.35□□□□□ -0.11
UBE3B-206ENST00000536398 NEBLO76041 1014 aa14.35□□□□□ -0.11
UBE3B-206ENST00000536398 KRT1P04264 644 aa14.35□□□□□ -0.11
UBE3B-206ENST00000536398 GIMD1P0DJR0 217 aa14.35□□□□□ -0.11
UBE3B-206ENST00000536398 HSPA9P38646 679 aaKnown RBP14.35□□□□□ -0.11
UBE3B-206ENST00000536398 CLDN6P56747 220 aa14.35□□□□□ -0.11
UBE3B-206ENST00000536398 ITKQ08881 620 aa14.35□□□□□ -0.11
UBE3B-206ENST00000536398 LLGL1Q15334 1064 aa14.35□□□□□ -0.11
UBE3B-206ENST00000536398 IFI16Q16666 785 aaKnown RBP14.35□□□□□ -0.11
UBE3B-206ENST00000536398 INAVAQ3KP66 663 aa14.35□□□□□ -0.11
UBE3B-206ENST00000536398 NPNTQ6UXI9 565 aa14.35□□□□□ -0.11
UBE3B-206ENST00000536398 LIPIQ6XZB0 460 aa14.35□□□□□ -0.11
UBE3B-206ENST00000536398 B4GALNT4Q76KP1 1039 aa14.35□□□□□ -0.11
UBE3B-206ENST00000536398 DCP2Q8IU60 420 aaKnown RBP14.35□□□□□ -0.11
UBE3B-206ENST00000536398 PLA2G15Q8NCC3 412 aa14.35□□□□□ -0.11
UBE3B-206ENST00000536398 FAM174AQ8TBP5 190 aa14.35□□□□□ -0.11
UBE3B-206ENST00000536398 NSMCE1Q8WV22 266 aa14.35□□□□□ -0.11
UBE3B-206ENST00000536398 TSGA13Q96PP4 275 aa14.35□□□□□ -0.11
UBE3B-206ENST00000536398 PANX2Q96RD6 677 aa14.35□□□□□ -0.11
UBE3B-206ENST00000536398 LGMNQ99538 433 aa14.35□□□□□ -0.11
UBE3B-206ENST00000536398 SEMA3CQ99985 751 aa14.35□□□□□ -0.11
UBE3B-206ENST00000536398 RBM22Q9NW64 420 aaKnown RBP eCLIP14.35□□□□□ -0.11
UBE3B-206ENST00000536398 B4GALT6Q9UBX8 382 aa14.35□□□□□ -0.11
UBE3B-206ENST00000536398 ACACBO00763 2458 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.34□□□□□ -0.11
UBE3B-206ENST00000536398 FAM221BA6H8Z2 402 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 MATN3O15232 486 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 PDHA1P08559 390 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 CCNCP24863 283 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 DSC2Q02487 901 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 NIPAL4Q0D2K0 466 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 INPP5AQ14642 412 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 LRRC14Q15048 493 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 DHRS13Q6UX07 377 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 MFSD7Q6UXD7 560 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 RAD9BQ6WBX8 426 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 DPPA4Q7L190 304 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 LRRC49Q8IUZ0 686 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 CCDC170Q8IYT3 715 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 RBFAQ8N0V3 343 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 PELI3Q8N2H9 469 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 BBS5Q8N3I7 341 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 CCNYQ8ND76 341 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 GATA6Q92908 595 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 FUBP1Q96AE4 644 aaKnown RBP14.34□□□□□ -0.11
UBE3B-206ENST00000536398 REXO2Q9Y3B8 237 aaKnown RBP14.34□□□□□ -0.11
UBE3B-206ENST00000536398 MSRB2Q9Y3D2 182 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 TTLL3Q9Y4R7 772 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 NEUROG3Q9Y4Z2 214 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 OR1A2Q9Y585 309 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 HEY1Q9Y5J3 304 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 RAI2Q9Y5P3 530 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 ALG6Q9Y672 507 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 EPN1Q9Y6I3 576 aaPredicted RBP14.34□□□□□ -0.11
UBE3B-206ENST00000536398 DUSP10Q9Y6W6 482 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 CHD8Q9HCK8 2581 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 SHROOM3Q8TF72 1996 aa14.34□□□□□ -0.11
UBE3B-206ENST00000536398 ARID1BQ8NFD5 2236 aaPredicted RBP14.34□□□□□ -0.11
UBE3B-206ENST00000536398 AKAP13Q12802 2813 aa14.33□□□□□ -0.11
UBE3B-206ENST00000536398 FAM149AA5PLN7 773 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 SPOPO43791 374 aa14.33□□□□□ -0.12
UBE3B-206ENST00000536398 RECQL5O94762 991 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms