RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 SHCBP1LQ9BZQ2 653 aa13.46□□□□□ -0.25
VPS33B-202ENST00000535906 POLR1EQ9GZS1 481 aaKnown RBP13.46□□□□□ -0.25
VPS33B-202ENST00000535906 RAP2CQ9Y3L5 183 aa13.46□□□□□ -0.25
VPS33B-202ENST00000535906 E9PBE3 544 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 MATN2O00339 956 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 CCNT2O60583 730 aaKnown RBP13.45□□□□□ -0.26
VPS33B-202ENST00000535906 KLHL41O60662 606 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 FKTNO75072 461 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 SKAP2O75563 359 aaPredicted RBP13.45□□□□□ -0.26
VPS33B-202ENST00000535906 PIGNO95427 931 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 SLC12A2P55011 1212 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 C5orf22Q49AR2 442 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 ARMC3Q5W041 872 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.45□□□□□ -0.26
VPS33B-202ENST00000535906 TMC7Q7Z402 723 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 LSMEM2Q8N112 164 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 OR7D4Q8NG98 312 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 OR6P1Q8NGX9 317 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 SGF29Q96ES7 293 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 OR52B2Q96RD2 323 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 MTRRQ9UBK8 725 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 ZDHHC2Q9UIJ5 367 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 ZFP37Q9Y6Q3 630 aaPredicted RBP13.45□□□□□ -0.26
VPS33B-202ENST00000535906 A0A087X1B8 175 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 SLC7A4O43246 635 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 DCXO43602 365 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 BUD23O43709 281 aaKnown RBP13.45□□□□□ -0.26
VPS33B-202ENST00000535906 ZBTB14O43829 449 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 SEC24AO95486 1093 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 TFEBP19484 476 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 HOXD9P28356 352 aaPredicted RBP13.45□□□□□ -0.26
VPS33B-202ENST00000535906 PRDX6P30041 224 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 RPL14P50914 215 aaKnown RBP13.45□□□□□ -0.26
VPS33B-202ENST00000535906 ATN1P54259 1190 aaPredicted RBP13.45□□□□□ -0.26
VPS33B-202ENST00000535906 RPS24P62847 133 aaKnown RBP13.45□□□□□ -0.26
VPS33B-202ENST00000535906 CSHL1Q14406 222 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 ZNF235Q14590 738 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 PTPRCAPQ14761 206 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 USP41Q3LFD5 358 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 FSCBQ5H9T9 825 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 RALGPS1Q5JS13 557 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 AAGABQ6PD74 315 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 DENND1CQ8IV53 801 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 KBTBD2Q8IY47 623 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 PPP1R36Q96LQ0 422 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 SEZ6LQ9BYH1 1024 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 PPP1R12CQ9BZL4 782 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 NACA2Q9H009 215 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 MRPL46Q9H2W6 279 aaKnown RBP13.45□□□□□ -0.26
VPS33B-202ENST00000535906 HIPK3Q9H422 1215 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 WDR55Q9H6Y2 383 aaPredicted RBP13.45□□□□□ -0.26
VPS33B-202ENST00000535906 SUDS3Q9H7L9 328 aaPredicted RBP13.45□□□□□ -0.26
VPS33B-202ENST00000535906 IGSF5Q9NSI5 407 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.45□□□□□ -0.26
VPS33B-202ENST00000535906 MARCH4Q9P2E8 410 aaPredicted RBP13.45□□□□□ -0.26
VPS33B-202ENST00000535906 ARL5AQ9Y689 179 aa13.45□□□□□ -0.26
VPS33B-202ENST00000535906 GOLGA8QA0A0J9YX86 632 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 GOLGA8OA6NCC3 632 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 ZNF840PA6NDX5 716 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 GOLGA8NF8WBI6 632 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 COCHO43405 550 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 KLKB1P03952 638 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 PRKAA2P54646 552 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 PRAMEP78395 509 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 BTKQ06187 659 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 GALNT3Q14435 633 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 METTL21CQ5VZV1 264 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 PGM2L1Q6PCE3 622 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 RNF135Q8IUD6 432 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 TXNDC5Q8NBS9 432 aaKnown RBP13.44□□□□□ -0.26
VPS33B-202ENST00000535906 ACTRT2Q8TDY3 377 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 IFT43Q96FT9 208 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 DEFB118Q96PH6 123 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 MRPL57Q9BQC6 102 aaKnown RBP13.44□□□□□ -0.26
VPS33B-202ENST00000535906 MFSD1Q9H3U5 465 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 NDE1Q9NXR1 346 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 DPPA5A6NC42 116 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 NEMP2A6NFY4 417 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 H3BNC9 293 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 S1PR4O95977 384 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 CXCL10P02778 98 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 LINGO3P0C6S8 592 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 PIRTP0C851 137 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 HMGA1P17096 107 aaKnown RBP13.44□□□□□ -0.26
VPS33B-202ENST00000535906 GLDCP23378 1020 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 TUFMP49411 452 aaKnown RBP13.44□□□□□ -0.26
VPS33B-202ENST00000535906 GNA12Q03113 381 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 IL31Q6EBC2 164 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 TMEM154Q6P9G4 183 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 ADGRG6Q86SQ4 1221 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 BLOC1S5Q8TDH9 187 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 TBATAQ96M53 351 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 NSMCE3Q96MG7 304 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 PRICKLE1Q96MT3 831 aaPredicted RBP13.44□□□□□ -0.26
VPS33B-202ENST00000535906 CDK5RAP1Q96SZ6 601 aaKnown RBP13.44□□□□□ -0.26
VPS33B-202ENST00000535906 CLSTN3Q9BQT9 956 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 CWH43Q9H720 699 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 TCF7L2Q9NQB0 619 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 GKN1Q9NS71 199 aa13.44□□□□□ -0.26
VPS33B-202ENST00000535906 PPM1HQ9ULR3 514 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms