RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 CAMK1DQ8IU85 385 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 NAT16Q8N8M0 369 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 GPR152Q8TDT2 470 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 WDR18Q9BV38 432 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 CMTM6Q9NX76 183 aa18.26■□□□□ 0.51
SFSWAP-203ENST00000535236 ATP6V0D1P61421 351 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 TNK2Q07912 1038 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 FAM35AQ86V20 835 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 MAB21L3Q8N8X9 362 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 OR4L1Q8NH43 312 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 PHF10Q8WUB8 498 aaKnown RBP18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 MPP4Q96JB8 637 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 MRIQ9BWK5 157 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 LOC100506127A0A0U1RQW1 187 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 NT5C1B-RDH14C9J2C7 533 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 FARP2O94887 1054 aaPredicted RBP18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 MC4RP32245 332 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 MYBPC1Q00872 1141 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 CBX2Q14781 532 aaPredicted RBP18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 PPP1R15BQ5SWA1 713 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 FAM151BQ6UXP7 276 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 RBFAQ8N0V3 343 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 MBOAT7Q96N66 472 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 TTPALQ9BTX7 342 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 FNDC11Q9BVV2 318 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 SPATA31C2B4DYI2 1134 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 PRKCIP41743 596 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 SPIRE1Q08AE8 756 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 SNAP47Q5SQN1 464 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 DEFB118Q96PH6 123 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 ACP6Q9NPH0 428 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 FAM105AQ9NUU6 356 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 RPTORQ8N122 1335 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 H3BNH8 94 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 ERBB2P04626 1255 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 FGF1P05230 155 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 OR1D2P34982 312 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 GRIA3P42263 894 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 MATKP42679 507 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 UGT2B15P54855 530 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 USP46P62068 366 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 TBX2Q13207 712 aaPredicted RBP18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 CPA6Q8N4T0 437 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 DNAJB14Q8TBM8 379 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 DUSP16Q9BY84 665 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 CLIC5Q9NZA1 410 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 PTGFRNQ9P2B2 879 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 IKZF3Q9UKT9 509 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 ASTN1O14525 1302 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 CCDC85CA6NKD9 419 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 GRM6O15303 877 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 HGFP14210 728 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 SRSF11Q05519 484 aaKnown RBP18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 GRM3Q14832 879 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 MEA1Q16626 185 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 GPR180Q86V85 440 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 FAM71AQ8IYT1 594 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 LINGO1Q96FE5 620 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 ZNF354BQ96LW1 612 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 SLC9A7Q96T83 725 aa18.25■□□□□ 0.51
SFSWAP-203ENST00000535236 SERPINB7O75635 380 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 APODP05090 189 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 SPATA31D3P0C874 917 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 TSHRP16473 764 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 ERCC2P18074 760 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 SPATA31D4Q6ZUB0 917 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 PHF13Q86YI8 300 aaPredicted RBP18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 AENQ8WTP8 325 aaKnown RBP18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 CNGB3Q9NQW8 809 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 SORCS3Q9UPU3 1222 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 GMPPBQ9Y5P6 360 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 GLUD2P49448 558 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 LRRC52Q8N7C0 313 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 HEXDCQ8WVB3 486 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 MYO19Q96H55 970 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 PRRG4Q9BZD6 226 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 INTS7Q9NVH2 962 aaKnown RBP18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 LRCH1Q9Y2L9 728 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 PCDHB9Q9Y5E1 797 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 CYP3A7-CYP3A51PA0A087WV96 503 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 ITGAVP06756 1048 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 CYP3A7P24462 503 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 BRMS1LQ5PSV4 323 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 ANXA8L1Q5VT79 327 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 SCIMPQ6UWF3 145 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 MON1AQ86VX9 555 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 IMP3Q9NV31 184 aaKnown RBP18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 CFAP97Q9P2B7 532 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 B4GALT5O43286 388 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 BRCC3P46736 316 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 NRF1Q16656 503 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 TAPT1Q6NXT6 567 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 RAVER1Q8IY67 606 aaKnown RBP18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 BEND7Q8N7W2 519 aaPredicted RBP18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 PYDC1Q8WXC3 89 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 HIPK3Q9H422 1215 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 EHD3Q9NZN3 535 aa18.24■□□□□ 0.51
SFSWAP-203ENST00000535236 LAG3P18627 525 aa18.23■□□□□ 0.51
SFSWAP-203ENST00000535236 TSPAN8P19075 237 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms