RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 MAT2AP31153 395 aaKnown RBP13.21□□□□□ -0.29
TMEM258-202ENST00000535042 STIP1P31948 543 aaKnown RBP13.21□□□□□ -0.29
TMEM258-202ENST00000535042 RALGDSQ12967 914 aa13.21□□□□□ -0.29
TMEM258-202ENST00000535042 FGL2Q14314 439 aa13.21□□□□□ -0.29
TMEM258-202ENST00000535042 SLC14A2Q15849 920 aa13.21□□□□□ -0.29
TMEM258-202ENST00000535042 PCSK7Q16549 785 aa13.21□□□□□ -0.29
TMEM258-202ENST00000535042 CYP1B1Q16678 543 aa13.21□□□□□ -0.29
TMEM258-202ENST00000535042 TMEM52BQ4KMG9 183 aa13.21□□□□□ -0.29
TMEM258-202ENST00000535042 SPDYCQ5MJ68 293 aa13.21□□□□□ -0.29
TMEM258-202ENST00000535042 LYSMD4Q5XG99 296 aa13.21□□□□□ -0.29
TMEM258-202ENST00000535042 SEL1L3Q68CR1 1132 aa13.21□□□□□ -0.29
TMEM258-202ENST00000535042 KDELC2Q7Z4H8 507 aa13.21□□□□□ -0.29
TMEM258-202ENST00000535042 PAF1Q8N7H5 531 aa13.21□□□□□ -0.29
TMEM258-202ENST00000535042 KLK6Q92876 244 aa13.21□□□□□ -0.29
TMEM258-202ENST00000535042 FERMT1Q9BQL6 677 aa13.21□□□□□ -0.29
TMEM258-202ENST00000535042 PCDH9Q9HC56 1237 aa13.21□□□□□ -0.29
TMEM258-202ENST00000535042 TMEM74BQ9NUR3 256 aa13.21□□□□□ -0.29
TMEM258-202ENST00000535042 PHTF1Q9UMS5 762 aa13.21□□□□□ -0.29
TMEM258-202ENST00000535042 PPIL1Q9Y3C6 166 aa13.21□□□□□ -0.29
TMEM258-202ENST00000535042 ATXN2Q99700 1313 aaKnown RBP13.2□□□□□ -0.3
TMEM258-202ENST00000535042 A0A0U1RQS6 177 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 A0A1W2PQ67 120 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 A8MX80 341 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 LATO43561 262 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 TSPAN6O43657 245 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 MMP20O60882 483 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 ZNF189O75820 626 aaPredicted RBP13.2□□□□□ -0.3
TMEM258-202ENST00000535042 EPN2O95208 641 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 IFNB1P01574 187 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 LMNAP02545 664 aaKnown RBP13.2□□□□□ -0.3
TMEM258-202ENST00000535042 ALPIP09923 528 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 MMP12P39900 470 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 CCR5P51681 352 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 SUOXP51687 545 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 WNT3AP56704 352 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 POLR2LP62875 67 aaKnown RBP13.2□□□□□ -0.3
TMEM258-202ENST00000535042 FAM193AP78312 1265 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 GALNT3Q14435 633 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 QPCTQ16769 361 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 ZNF284Q2VY69 593 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 TMEM259Q4ZIN3 620 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 FAXCQ5TGI0 409 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 ITPRIPL1Q6GPH6 555 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 LAIR1Q6GTX8 287 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 NEK5Q6P3R8 708 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 ASCL5Q7RTU5 278 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 TRIM69Q86WT6 500 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 HORMAD1Q86X24 394 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 TAB3Q8N5C8 712 aaPredicted RBP13.2□□□□□ -0.3
TMEM258-202ENST00000535042 C12orf50Q8NA57 414 aaPredicted RBP13.2□□□□□ -0.3
TMEM258-202ENST00000535042 LPCAT1Q8NF37 534 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 DNASE2BQ8WZ79 361 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 FOXJ1Q92949 421 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 MAGOHBQ96A72 148 aaKnown RBP13.2□□□□□ -0.3
TMEM258-202ENST00000535042 LOXL4Q96JB6 756 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 MRGPRX2Q96LB1 330 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 NAP1L3Q99457 506 aaPredicted RBP13.2□□□□□ -0.3
TMEM258-202ENST00000535042 WRAP53Q9BUR4 548 aaKnown RBP13.2□□□□□ -0.3
TMEM258-202ENST00000535042 HOMER3Q9NSC5 361 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 B4GALT6Q9UBX8 382 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 FAM153AQ9UHL3 310 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 EIF2B4Q9UI10 523 aaKnown RBP13.2□□□□□ -0.3
TMEM258-202ENST00000535042 RAB23Q9ULC3 237 aa13.2□□□□□ -0.3
TMEM258-202ENST00000535042 A0A0J9YYE9 177 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 LOC285095A0A1B0GVY8 99 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 IGLON5A6NGN9 336 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 NPIPB15A6NHN6 443 aaPredicted RBP13.19□□□□□ -0.3
TMEM258-202ENST00000535042 MEI4A8MW99 385 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 NEMP1O14524 444 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 WNT9AO14904 365 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 TRBC1P01850 177 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 LHCGRP22888 699 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 RPL22P35268 128 aaKnown RBP13.19□□□□□ -0.3
TMEM258-202ENST00000535042 HNF1BP35680 557 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 COILP38432 576 aaPredicted RBP13.19□□□□□ -0.3
TMEM258-202ENST00000535042 CHRNA4P43681 627 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 CREB5Q02930 508 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 CDK18Q07002 472 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 ELP6Q0PNE2 266 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 OLIG2Q13516 323 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 CCDC6Q16204 474 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 PARP6Q2NL67 630 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 P3H1Q32P28 736 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 ERAP2Q6P179 960 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 ARHGEF18Q6ZSZ5 1173 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 DPPA4Q7L190 304 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 TSPAN33Q86UF1 283 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 KLHDC8BQ8IXV7 354 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 RGL4Q8IZJ4 473 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 IPMKQ8NFU5 416 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 C1orf216Q8TAB5 229 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 SNX19Q92543 992 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 PIGKQ92643 395 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 SCRN2Q96FV2 425 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 FEM1CQ96JP0 617 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 MCCC1Q96RQ3 725 aaPredicted RBP13.19□□□□□ -0.3
TMEM258-202ENST00000535042 C1QTNF2Q9BXJ5 285 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 ARRDC1-AS1Q9H2J1 176 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 VPS45Q9NRW7 570 aa13.19□□□□□ -0.3
TMEM258-202ENST00000535042 PILRBQ9UKJ0 227 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms