RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 THOC1Q96FV9 657 aaKnown RBP12.41□□□□□ -0.42
SCARB1-204ENST00000535005 IMP4Q96G21 291 aaKnown RBP12.41□□□□□ -0.42
SCARB1-204ENST00000535005 TMEM237Q96Q45 408 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 OSBPL6Q9BZF3 934 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 SUN2Q9UH99 717 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 STON1Q9Y6Q2 735 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 MUC22E2RYF6 1773 aaPredicted RBP12.41□□□□□ -0.42
SCARB1-204ENST00000535005 KANSL1LA0AUZ9 987 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 KLHL33A6NCF5 533 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 ANKRD33BA6NCL7 494 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 ANTXRLA6NF34 631 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 WASH3PC4AMC7 463 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 DIAPH2O60879 1101 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 IGSF6O95976 241 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 FESP07332 822 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 CHRNB1P11230 501 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 CD72P21854 359 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 IL12RB1P42701 662 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 MAGEA6P43360 314 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 CCNHP51946 323 aaPredicted RBP12.41□□□□□ -0.42
SCARB1-204ENST00000535005 MAXP61244 160 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 AP1S1P61966 158 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 MRPS35P82673 323 aaKnown RBP12.41□□□□□ -0.42
SCARB1-204ENST00000535005 GPS1Q13098 491 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 SEMA5AQ13591 1074 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 RBBP5Q15291 538 aaKnown RBP12.41□□□□□ -0.42
SCARB1-204ENST00000535005 TRIP13Q15645 432 aaPredicted RBP12.41□□□□□ -0.42
SCARB1-204ENST00000535005 FAM182AQ5T1J6 154 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 AP1ARQ63HQ0 302 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 SERPINA13PQ6UXR4 307 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 CEP128Q6ZU80 1094 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 SIX5Q8N196 739 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 OR2A12Q8NGT7 310 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 PTPRN2Q92932 1015 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 ACOX2Q99424 681 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 GABRG3Q99928 467 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 SEMA3CQ99985 751 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 LTB4R2Q9NPC1 389 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 VPS45Q9NRW7 570 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 WHRNQ9P202 907 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 ASIC3Q9UHC3 531 aa12.41□□□□□ -0.42
SCARB1-204ENST00000535005 EDDM13A0A1B0GTR0 161 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 TLDC2A0PJX2 215 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 INSIG1O15503 277 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 PSMD3O43242 534 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 HNRNPCL1O60812 293 aaKnown RBP12.4□□□□□ -0.42
SCARB1-204ENST00000535005 ANXA9O76027 345 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 MMP2P08253 660 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 PSMB4P28070 264 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 NTSR1P30989 418 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 ADCY8P40145 1251 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 KCNJ2P63252 427 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 DSC2Q02487 901 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 ITKQ08881 620 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 FZD5Q13467 585 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 LRRC32Q14392 662 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 PRPSAP1Q14558 356 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 MYLK3Q32MK0 819 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 NCEH1Q6PIU2 408 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 PPP1R21Q6ZMI0 780 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 PRPF39Q86UA1 669 aaKnown RBP12.4□□□□□ -0.42
SCARB1-204ENST00000535005 LMNTD2Q8IXW0 634 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 CHPFQ8IZ52 775 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 IL17RCQ8NAC3 791 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 INPP5DQ92835 1189 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 EDAQ92838 391 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 VOPP1Q96AW1 172 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 UHRF1Q96T88 793 aaPredicted RBP12.4□□□□□ -0.42
SCARB1-204ENST00000535005 GORASP1Q9BQQ3 440 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 CPEB1Q9BZB8 566 aaKnown RBP12.4□□□□□ -0.42
SCARB1-204ENST00000535005 TM6SF2Q9BZW4 377 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 TRIM31Q9BZY9 425 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 TNKS2Q9H2K2 1166 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 ETNK1Q9HBU6 452 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 RAB6BQ9NRW1 208 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 ZFATQ9P243 1243 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 KLHL14Q9P2G3 628 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 NDRG2Q9UN36 371 aaKnown RBP12.4□□□□□ -0.42
SCARB1-204ENST00000535005 AAR2Q9Y312 384 aaKnown RBP12.4□□□□□ -0.42
SCARB1-204ENST00000535005 LRRC42Q9Y546 428 aa12.4□□□□□ -0.42
SCARB1-204ENST00000535005 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.39□□□□□ -0.43
SCARB1-204ENST00000535005 ERI2A8K979 691 aaKnown RBP12.39□□□□□ -0.43
SCARB1-204ENST00000535005 CHURC1-FNTBB4DL54 471 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 NDC80O14777 642 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 ALOX15BO15296 676 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 UNC5CO95185 931 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 POP4O95707 220 aaKnown RBP12.39□□□□□ -0.43
SCARB1-204ENST00000535005 LMNAP02545 664 aaKnown RBP12.39□□□□□ -0.43
SCARB1-204ENST00000535005 PRKCHP24723 683 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 TARSP26639 723 aaKnown RBP12.39□□□□□ -0.43
SCARB1-204ENST00000535005 TIE1P35590 1138 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 RECQLP46063 649 aaPredicted RBP12.39□□□□□ -0.43
SCARB1-204ENST00000535005 VPS41P49754 854 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 SCNN1BP51168 640 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 SEC13P55735 322 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 CALCOCO2Q13137 446 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 IHHQ14623 411 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 GRM3Q14832 879 aa12.39□□□□□ -0.43
SCARB1-204ENST00000535005 ATXN7L2Q5T6C5 722 aaPredicted RBP12.39□□□□□ -0.43
SCARB1-204ENST00000535005 C9orf64Q5T6V5 341 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms