RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 CBWD6Q4V339 395 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 TM4SF20Q53R12 229 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 COBLL1Q53SF7 1204 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 TRIM61Q5EBN2 209 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 CBWD3Q5JTY5 395 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 CBWD5Q5RIA9 395 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 ZNF658Q5TYW1 1059 aaPredicted RBP5.39□□□□□ -1.55
ATM-224ENST00000534625 LYSMD4Q5XG99 296 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 ANKRD40Q6AI12 368 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 PM20D1Q6GTS8 502 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 SLC36A4Q6YBV0 504 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 BHLHA9Q7RTU4 235 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 TADA2BQ86TJ2 420 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 PIGZQ86VD9 579 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 SLC41A1Q8IVJ1 513 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 CHPFQ8IZ52 775 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 TTC39CQ8N584 583 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 UBR7Q8N806 425 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 ANKRD52Q8NB46 1076 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 ENGASEQ8NFI3 743 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 NDRG1Q92597 394 aaKnown RBP5.39□□□□□ -1.55
ATM-224ENST00000534625 ERCC4Q92889 916 aaPredicted RBP5.39□□□□□ -1.55
ATM-224ENST00000534625 NEIL1Q96FI4 390 aaPredicted RBP5.39□□□□□ -1.55
ATM-224ENST00000534625 PIWIL1Q96J94 861 aaKnown RBP5.39□□□□□ -1.55
ATM-224ENST00000534625 MRGPRX1Q96LB2 322 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 GSDMAQ96QA5 445 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 DEPDC7Q96QD5 511 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 LRRC37BQ96QE4 947 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 CDK5RAP1Q96SZ6 601 aaKnown RBP5.39□□□□□ -1.55
ATM-224ENST00000534625 ZNF747Q9BV97 191 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 NUSAP1Q9BXS6 441 aaKnown RBP5.39□□□□□ -1.55
ATM-224ENST00000534625 DNAI2Q9GZS0 605 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 FAM124BQ9H5Z6 455 aaPredicted RBP5.39□□□□□ -1.55
ATM-224ENST00000534625 CD93Q9NPY3 652 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 AGO1Q9UL18 857 aaKnown RBP5.39□□□□□ -1.55
ATM-224ENST00000534625 CLEC4EQ9ULY5 219 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 ZNF510Q9Y2H8 683 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 SLC27A6Q9Y2P4 619 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 TESMINQ9Y4I5 508 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 RAD54BQ9Y620 910 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 DSPP15924 2871 aaKnown RBP5.39□□□□□ -1.55
ATM-224ENST00000534625 SPEGQ15772 3267 aa5.39□□□□□ -1.55
ATM-224ENST00000534625 ATRXP46100 2492 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 CKAP5Q14008 2032 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 ASPMQ8IZT6 3477 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 SLC12A8A0AV02 714 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 TRIM49BA6NDI0 452 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 MATN2O00339 956 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 XPO1O14980 1071 aaKnown RBP5.38□□□□□ -1.55
ATM-224ENST00000534625 AP5Z1O43299 807 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 ZNF217O75362 1048 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 TOP3BO95985 862 aaKnown RBP5.38□□□□□ -1.55
ATM-224ENST00000534625 ZBED1O96006 694 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 SERPINF2P08697 491 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 CEACAM1P13688 526 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 ENGP17813 658 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 NAT1P18440 290 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 HOXD12P35452 270 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 CHKAP35790 457 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 TKTL1P51854 596 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 BCAT1P54687 386 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 MFAP3P55082 362 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 YWHAGP61981 247 aaKnown RBP eCLIP5.38□□□□□ -1.55
ATM-224ENST00000534625 FKBP3Q00688 224 aaKnown RBP5.38□□□□□ -1.55
ATM-224ENST00000534625 ZNF33AQ06730 810 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 LMAN2Q12907 356 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 CUL2Q13617 745 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 ENPP2Q13822 863 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 STILQ15468 1287 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 TBR1Q16650 682 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 ST3GAL2Q16842 350 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 DUOXA1Q1HG43 343 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 GOLGA7BQ2TAP0 167 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 UAP1L1Q3KQV9 507 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 SPDYAQ5MJ70 313 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 TMEM215Q68D42 235 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 SDE2Q6IQ49 451 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 PIP4P1Q86T03 277 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 TAX1BP1Q86VP1 789 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 DENND1CQ8IV53 801 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 FAM217AQ8IXS0 508 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 ARHGAP18Q8N392 663 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 CPXM2Q8N436 756 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 TRIML1Q8N9V2 468 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 DEFB124Q8NES8 71 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 UBA3Q8TBC4 463 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 TFAP2BQ92481 460 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 SLC35C1Q96A29 364 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 CCDC34Q96HJ3 373 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 ZNF419Q96HQ0 510 aaPredicted RBP5.38□□□□□ -1.55
ATM-224ENST00000534625 IPO9Q96P70 1041 aaKnown RBP5.38□□□□□ -1.55
ATM-224ENST00000534625 ZSWIM1Q9BR11 485 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 ULBP1Q9BZM6 244 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 DCLK3Q9C098 648 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 ZDHHC5Q9C0B5 715 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 FSCN3Q9NQT6 498 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 RMND1Q9NWS8 449 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 GALNT8Q9NY28 637 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 THAP10Q9P2Z0 257 aaPredicted RBP5.38□□□□□ -1.55
ATM-224ENST00000534625 RASAL2Q9UJF2 1139 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms