RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 CLK4Q9HAZ1 481 aaKnown RBP7.05□□□□□ -1.28
CTNND1-236ENST00000533667 NEK6Q9HC98 313 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 SNX15Q9NRS6 342 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 FAM50BQ9Y247 325 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 NCKAP1Q9Y2A7 1128 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 COL5A2P05997 1499 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-236ENST00000533667 MST1RQ04912 1400 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 TRIM43BA6NCK2 446 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 TISP43B9A030 160 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 BPGMP07738 259 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 CRHR1P34998 444 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 MRPS5P82675 430 aaKnown RBP7.05□□□□□ -1.28
CTNND1-236ENST00000533667 TRAP1Q12931 704 aaKnown RBP7.05□□□□□ -1.28
CTNND1-236ENST00000533667 CAPSQ13938 189 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 TCEA2Q15560 299 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 IL17AQ16552 155 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 NRF1Q16656 503 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 LACTB2Q53H82 288 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-236ENST00000533667 C9orf131Q5VYM1 1079 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 WSCD1Q658N2 575 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 SPATA19Q7Z5L4 167 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 TBC1D21Q8IYX1 336 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 WDR48Q8TAF3 677 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 ITCHQ96J02 903 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 PLEKHG4BQ96PX9 1271 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 TBCDQ9BTW9 1192 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 RNPEPQ9H4A4 650 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 ASB8Q9H765 288 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 ARHGEF3Q9NR81 526 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 FBXO5Q9UKT4 447 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 SPEF1Q9Y4P9 236 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 RIC1Q4ADV7 1423 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 DHRS12A0PJE2 317 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 KRT36O76013 467 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 SPATA31C1P0DKV0 1188 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 CSH1P0DML2 217 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 CSH2P0DML3 217 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 LPOP22079 712 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-236ENST00000533667 SMARCB1Q12824 385 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 NOMO1Q15155 1222 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 TAF5Q15542 800 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 ZC3H12AQ5D1E8 599 aaKnown RBP7.05□□□□□ -1.28
CTNND1-236ENST00000533667 ZDHHC20Q5W0Z9 365 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 VN1R5Q7Z5H4 357 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 OFCC1Q8IZS5 231 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 LEMD2Q8NC56 503 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 GLIS3Q8NEA6 775 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 AP3S1Q92572 193 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 NACC2Q96BF6 587 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 C7orf26Q96N11 449 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 GAD1Q99259 594 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 FTHL17Q9BXU8 183 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 NOL6Q9H6R4 1146 aaKnown RBP7.05□□□□□ -1.28
CTNND1-236ENST00000533667 KLHL1Q9NR64 748 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 FBXO6Q9NRD1 293 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-236ENST00000533667 FAM198AQ9UFP1 575 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 VPS4AQ9UN37 437 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 GIT1Q9Y2X7 761 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 ARHGEF28Q8N1W1 1705 aaKnown RBP7.05□□□□□ -1.28
CTNND1-236ENST00000533667 TGFB1I1O43294 461 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 MSCO60682 206 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 PARNO95453 639 aaKnown RBP7.05□□□□□ -1.28
CTNND1-236ENST00000533667 ECDO95905 644 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-236ENST00000533667 ALOX5P09917 674 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 HGFP14210 728 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 ADSLP30566 484 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-236ENST00000533667 CRATP43155 626 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 BTG3Q14201 252 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-236ENST00000533667 NDUFAF6Q330K2 333 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 INTS6LQ5JSJ4 861 aaKnown RBP7.05□□□□□ -1.28
CTNND1-236ENST00000533667 PPM1LQ5SGD2 360 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 KCTD4Q8WVF5 259 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 SLC44A1Q8WWI5 657 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 SLC4A5Q9BY07 1137 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 DGCR6LQ9BY27 220 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 RACGAP1Q9H0H5 632 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 RSPH9Q9H1X1 276 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-236ENST00000533667 MOV10Q9HCE1 1003 aaKnown RBP7.05□□□□□ -1.28
CTNND1-236ENST00000533667 STOML2Q9UJZ1 356 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 PSMD13Q9UNM6 376 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 DMTF1Q9Y222 760 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 ERGIC3Q9Y282 383 aa7.05□□□□□ -1.28
CTNND1-236ENST00000533667 TDRKHQ9Y2W6 561 aaKnown RBP7.05□□□□□ -1.28
CTNND1-236ENST00000533667 TMEM131LA2VDJ0 1609 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 TSC22D2O75157 780 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 PEX11AO75192 247 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 ENTPD5O75356 428 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 MFN2O95140 757 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 SEC24AO95486 1093 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 ERCC2P18074 760 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 KLRC2P26717 231 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 PRDX6P30041 224 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 MARCKSL1P49006 195 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 PSMD4P55036 377 aaKnown RBP7.04□□□□□ -1.28
CTNND1-236ENST00000533667 COPZ1P61923 177 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 PTSQ03393 145 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 GPR180Q86V85 440 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 HJURPQ8NCD3 748 aaPredicted RBP7.04□□□□□ -1.28
CTNND1-236ENST00000533667 DUSP16Q9BY84 665 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 ST6GALNAC4Q9H4F1 302 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms