RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 C22orf39Q6P5X5 142 aa18.64■□□□□ 0.57
SMPD1-208ENST00000533123 METTL3Q86U44 580 aaKnown RBP18.64■□□□□ 0.57
SMPD1-208ENST00000533123 BCAS4Q8TDM0 211 aa18.64■□□□□ 0.57
SMPD1-208ENST00000533123 DNASE1L2Q92874 299 aa18.64■□□□□ 0.57
SMPD1-208ENST00000533123 KLF6Q99612 283 aaPredicted RBP18.64■□□□□ 0.57
SMPD1-208ENST00000533123 FAM107BQ9H098 131 aa18.64■□□□□ 0.57
SMPD1-208ENST00000533123 SCUBE2Q9NQ36 999 aa18.64■□□□□ 0.57
SMPD1-208ENST00000533123 MOCS1Q9NZB8 636 aa18.64■□□□□ 0.57
SMPD1-208ENST00000533123 BFARQ9NZS9 450 aa18.64■□□□□ 0.57
SMPD1-208ENST00000533123 SAMD15Q9P1V8 674 aa18.64■□□□□ 0.57
SMPD1-208ENST00000533123 ATP9BO43861 1147 aa18.64■□□□□ 0.57
SMPD1-208ENST00000533123 ASLP04424 464 aa18.64■□□□□ 0.57
SMPD1-208ENST00000533123 NNMTP40261 264 aa18.64■□□□□ 0.57
SMPD1-208ENST00000533123 PREPLQ4J6C6 727 aaPredicted RBP18.64■□□□□ 0.57
SMPD1-208ENST00000533123 SLC26A11Q86WA9 606 aa18.64■□□□□ 0.57
SMPD1-208ENST00000533123 ZNF366Q8N895 744 aa18.64■□□□□ 0.57
SMPD1-208ENST00000533123 CENPTQ96BT3 561 aa18.64■□□□□ 0.57
SMPD1-208ENST00000533123 FCRL3Q96P31 734 aaPredicted RBP18.64■□□□□ 0.57
SMPD1-208ENST00000533123 NUDCD1Q96RS6 583 aa18.64■□□□□ 0.57
SMPD1-208ENST00000533123 TBL1YQ9BQ87 522 aa18.64■□□□□ 0.57
SMPD1-208ENST00000533123 FICDQ9BVA6 458 aa18.64■□□□□ 0.57
SMPD1-208ENST00000533123 BPTFQ12830 3046 aa18.63■□□□□ 0.57
SMPD1-208ENST00000533123 GOLGA8RI6L899 631 aa18.63■□□□□ 0.57
SMPD1-208ENST00000533123 TIMM44O43615 452 aa18.63■□□□□ 0.57
SMPD1-208ENST00000533123 SRPRAP08240 638 aaKnown RBP18.63■□□□□ 0.57
SMPD1-208ENST00000533123 SRFP11831 508 aa18.63■□□□□ 0.57
SMPD1-208ENST00000533123 KRT4P19013 534 aa18.63■□□□□ 0.57
SMPD1-208ENST00000533123 GEMP55040 296 aa18.63■□□□□ 0.57
SMPD1-208ENST00000533123 TTC31Q49AM3 519 aaPredicted RBP18.63■□□□□ 0.57
SMPD1-208ENST00000533123 NAPEPLDQ6IQ20 393 aa18.63■□□□□ 0.57
SMPD1-208ENST00000533123 Q6ZVU0 165 aa18.63■□□□□ 0.57
SMPD1-208ENST00000533123 RYBPQ8N488 228 aaPredicted RBP18.63■□□□□ 0.57
SMPD1-208ENST00000533123 MRGPRX2Q96LB1 330 aa18.63■□□□□ 0.57
SMPD1-208ENST00000533123 SMC6Q96SB8 1091 aa18.63■□□□□ 0.57
SMPD1-208ENST00000533123 MTG2Q9H4K7 406 aa18.63■□□□□ 0.57
SMPD1-208ENST00000533123 RPS6KL1Q9Y6S9 549 aa18.63■□□□□ 0.57
SMPD1-208ENST00000533123 COL4A2P08572 1712 aa18.63■□□□□ 0.57
SMPD1-208ENST00000533123 ALDH1A2O94788 518 aa18.62■□□□□ 0.57
SMPD1-208ENST00000533123 SERPINF2P08697 491 aa18.62■□□□□ 0.57
SMPD1-208ENST00000533123 GKP32189 559 aa18.62■□□□□ 0.57
SMPD1-208ENST00000533123 WNT3AP56704 352 aa18.62■□□□□ 0.57
SMPD1-208ENST00000533123 ST8SIA6P61647 398 aa18.62■□□□□ 0.57
SMPD1-208ENST00000533123 PFKPQ01813 784 aa18.62■□□□□ 0.57
SMPD1-208ENST00000533123 MPP3Q13368 585 aa18.62■□□□□ 0.57
SMPD1-208ENST00000533123 PON2Q15165 354 aa18.62■□□□□ 0.57
SMPD1-208ENST00000533123 KDELC1Q6UW63 502 aa18.62■□□□□ 0.57
SMPD1-208ENST00000533123 RALGPS2Q86X27 583 aaPredicted RBP18.62■□□□□ 0.57
SMPD1-208ENST00000533123 OR2AP1Q8NGE2 309 aa18.62■□□□□ 0.57
SMPD1-208ENST00000533123 GDAP1Q8TB36 358 aa18.62■□□□□ 0.57
SMPD1-208ENST00000533123 FRS2Q8WU20 508 aa18.62■□□□□ 0.57
SMPD1-208ENST00000533123 EZH1Q92800 747 aaPredicted RBP18.62■□□□□ 0.57
SMPD1-208ENST00000533123 ISG20Q96AZ6 181 aaKnown RBP18.62■□□□□ 0.57
SMPD1-208ENST00000533123 TADA1Q96BN2 335 aa18.62■□□□□ 0.57
SMPD1-208ENST00000533123 FSD1LQ9BXM9 530 aa18.62■□□□□ 0.57
SMPD1-208ENST00000533123 CEP44Q9C0F1 390 aa18.62■□□□□ 0.57
SMPD1-208ENST00000533123 VPS45Q9NRW7 570 aa18.62■□□□□ 0.57
SMPD1-208ENST00000533123 EVLQ9UI08 416 aaPredicted RBP18.62■□□□□ 0.57
SMPD1-208ENST00000533123 HCN2Q9UL51 889 aa18.62■□□□□ 0.57
SMPD1-208ENST00000533123 PCDHGC4Q9Y5F7 938 aa18.62■□□□□ 0.57
SMPD1-208ENST00000533123 NUDT18Q6ZVK8 323 aa18.62■□□□□ 0.57
SMPD1-208ENST00000533123 CCNJLQ8IV13 435 aa18.62■□□□□ 0.57
SMPD1-208ENST00000533123 ZNF669Q96BR6 464 aaPredicted RBP18.62■□□□□ 0.57
SMPD1-208ENST00000533123 SERAC1Q96JX3 654 aa18.62■□□□□ 0.57
SMPD1-208ENST00000533123 PPP1R2P1Q96PQ5 205 aa18.62■□□□□ 0.57
SMPD1-208ENST00000533123 NAT9Q9BTE0 207 aa18.62■□□□□ 0.57
SMPD1-208ENST00000533123 C8orf33Q9H7E9 229 aaPredicted RBP18.62■□□□□ 0.57
SMPD1-208ENST00000533123 CHRAC1Q9NRG0 131 aa18.62■□□□□ 0.57
SMPD1-208ENST00000533123 SENP1Q9P0U3 644 aa18.62■□□□□ 0.57
SMPD1-208ENST00000533123 PRKAG3Q9UGI9 489 aa18.62■□□□□ 0.57
SMPD1-208ENST00000533123 MYLKQ15746 1914 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 IQANK1A0A1B0GTG1 560 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 CCDC78A2IDD5 438 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 FAM47DPA6NHR8 397 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 WASH3PC4AMC7 463 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 IGSF6O95976 241 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 POLBP06746 335 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 SNRPD1P62314 119 aaKnown RBP18.61■□□□□ 0.57
SMPD1-208ENST00000533123 CDH17Q12864 832 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 BMPR2Q13873 1038 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 ZNF234Q14588 700 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 FNDC3BQ53EP0 1204 aaKnown RBP18.61■□□□□ 0.57
SMPD1-208ENST00000533123 DENND5AQ6IQ26 1287 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 NCEH1Q6PIU2 408 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 PCDH20Q8N6Y1 951 aaKnown RBP18.61■□□□□ 0.57
SMPD1-208ENST00000533123 UCMAQ8WVF2 138 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 MFSD3Q96ES6 412 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 SLC2A4RGQ9NR83 387 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 HECAQ9UBI9 543 aaPredicted RBP18.61■□□□□ 0.57
SMPD1-208ENST00000533123 TCF20Q9UGU0 1960 aaKnown RBP18.61■□□□□ 0.57
SMPD1-208ENST00000533123 GMNCA6NCL1 334 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 K7EQS6 105 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 PSMD3O43242 534 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 ERVK-10P10266 1014 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 HLA-EP13747 358 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 CES1P23141 567 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 RPA3P35244 121 aaPredicted RBP18.61■□□□□ 0.57
SMPD1-208ENST00000533123 ADRA1AP35348 466 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 SLC44A4Q53GD3 710 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 CARD16Q5EG05 197 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 EGFLAMQ63HQ2 1017 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms