RNA–Protein interactions for RNA: ENST00000532912.1

TRIM53BP-201, Transcript of tripartite motif containing 53B, pseudogene, humanhuman

BASIC

Gene TRIM53BP, Length 1,720 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53BP-201ENST00000532912 RGS18Q9NS28 235 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 ABI2Q9NYB9 513 aaPredicted RBP8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 GMIPQ9P107 970 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 PDP2Q9P2J9 529 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 RIMS3Q9UJD0 308 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 SARDHQ9UL12 918 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 G3BP2Q9UN86 482 aaKnown RBP8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 MTF2Q9Y483 593 aaPredicted RBP8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 CCDC189A1A4V9 331 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 TRPC5OSA6NMA1 111 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 LDB2O43679 373 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 S1PR4O95977 384 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 PENKP01210 267 aaPredicted RBP8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 FESP07332 822 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 LTA4HP09960 611 aaKnown RBP8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 SLC2A3P11169 496 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 HNRNPLP14866 589 aaKnown RBP eCLIP8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 ARSAP15289 507 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 SLC26A3P40879 764 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 MAGEA11P43364 429 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 CDKN2DP55273 166 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 C1QTNF8P60827 252 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 FAM189BP81408 668 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 CACNB2Q08289 660 aaPredicted RBP8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 MRPL58Q14197 206 aaKnown RBP8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 MBTPS1Q14703 1052 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 ACAP2Q15057 778 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 PSMD5Q16401 504 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 GPR162Q16538 588 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 DDR2Q16832 855 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 FAM83EQ2M2I3 478 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 AGAP9Q5VTM2 703 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 MFSD14CQ5VZR4 134 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 FBXL22Q6P050 247 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 FBXL19Q6PCT2 694 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 TFAP2DQ7Z6R9 452 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 TMEM126BQ8IUX1 230 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 CCNYL1Q8N7R7 359 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 HIPK4Q8NE63 616 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 CEP70Q8NHQ1 597 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 PSMG2Q969U7 264 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 SGF29Q96ES7 293 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 TRAPPC9Q96Q05 1148 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 BTBD9Q96Q07 612 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 SERPINI1Q99574 410 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 DDX50Q9BQ39 737 aaKnown RBP8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 VCX3BQ9H321 246 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 FBXO44Q9H4M3 255 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 WDR41Q9HAD4 459 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 SPC25Q9HBM1 224 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 TRMT13Q9NUP7 481 aaKnown RBP8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 UTP6Q9NYH9 597 aaKnown RBP8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 C6orf203Q9P0P8 240 aaPredicted RBP8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 MARCH4Q9P2E8 410 aaPredicted RBP8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 GREB1Q4ZG55 1949 aa8.34□□□□□ -1.07
TRIM53BP-201ENST00000532912 PRSS51A0A1B0GVH4 220 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 TTC24A2A3L6 582 aaPredicted RBP8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 FAM155AB1AL88 458 aaPredicted RBP8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 UBFD1O14562 309 aaKnown RBP8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 MUSKO15146 869 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 AP1G1O43747 822 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 BCAS2O75934 225 aaPredicted RBP8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 VNN2O95498 520 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 RBP1P09455 135 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 CCDC166P0CW27 439 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 VCLP18206 1134 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 CCND3P30281 292 aaPredicted RBP8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 GRK4P32298 578 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 KCNC1P48547 511 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 SUOXP51687 545 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 INHBEP58166 350 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 NFKB2Q00653 900 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 CAP1Q01518 475 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 IL10RBQ08334 325 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 ADGRE1Q14246 886 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 TRIP10Q15642 601 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 TRIP4Q15650 581 aaPredicted RBP8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 NFE2Q16621 373 aaPredicted RBP8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 LRRC36Q1X8D7 754 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 SIRPB2Q5JXA9 342 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 MARC1Q5VT66 337 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 NXNQ6DKJ4 435 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 RGMBQ6NW40 437 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 C8orf82Q6P1X6 216 aaPredicted RBP8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 GK5Q6ZS86 529 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 RPS27LQ71UM5 84 aaKnown RBP8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 ISCA2Q86U28 154 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 SAPCD2Q86UD0 394 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 CUZD1Q86UP6 607 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 DCP1BQ8IZD4 617 aaKnown RBP8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 LILRA2Q8N149 483 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 ARHGAP18Q8N392 663 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 TTC9BQ8N6N2 239 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 CCDC126Q96EE4 140 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 L3HYPDHQ96EM0 354 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 MYEOVQ96EZ4 313 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 FAR2Q96K12 515 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 BTN2A3PQ96KV6 586 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 EFCAB1Q9HAE3 211 aa8.33□□□□□ -1.08
TRIM53BP-201ENST00000532912 PIDD1Q9HB75 910 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms