RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 NXNL1Q96CM4 212 aa15.39■□□□□ 0.06
PCDHA3-202ENST00000532566 ZNF317Q96PQ6 595 aaPredicted RBP15.39■□□□□ 0.06
PCDHA3-202ENST00000532566 RTKNQ9BST9 563 aa15.39■□□□□ 0.06
PCDHA3-202ENST00000532566 LEF1Q9UJU2 399 aaPredicted RBP15.39■□□□□ 0.06
PCDHA3-202ENST00000532566 MYRFQ9Y2G1 1151 aa15.39■□□□□ 0.06
PCDHA3-202ENST00000532566 SNX10Q9Y5X0 201 aa15.39■□□□□ 0.06
PCDHA3-202ENST00000532566 SMNDC1O75940 238 aaKnown RBP eCLIP15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 TXNDC11Q6PKC3 985 aa15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 OLFML1Q6UWY5 402 aa15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 CCDC149Q6ZUS6 474 aa15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 ANAPC2Q9UJX6 822 aa15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 BTRCQ9Y297 605 aa15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 ZNF839A8K0R7 811 aa15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 IPO13O94829 963 aaKnown RBP15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 IFNA14P01570 189 aa15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 CATP04040 527 aaKnown RBP15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 SLC18A1P54219 525 aa15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 HNRNPDQ14103 355 aaKnown RBP15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 ZC3H12BQ5HYM0 836 aaKnown RBP15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 HECTD2Q5U5R9 776 aa15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 SYPL2Q5VXT5 272 aa15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 GPRIN3Q6ZVF9 776 aa15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 SELENOMQ8WWX9 145 aa15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 ZDHHC6Q9H6R6 413 aa15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 SIN3BO75182 1162 aa15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 EPB42P16452 691 aa15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 RANBP1P43487 201 aa15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 ACSM2AQ08AH3 577 aa15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 PRKG2Q13237 762 aa15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 NRF1Q16656 503 aa15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 ARL13AQ5H913 290 aaPredicted RBP15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 ACSM2BQ68CK6 577 aa15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 TTC7BQ86TV6 843 aa15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 RTL3Q8N8U3 475 aaKnown RBP15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 MAGEC3Q8TD91 643 aa15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 RNF39Q9H2S5 420 aa15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 MIEF1Q9NQG6 463 aa15.39■□□□□ 0.05
PCDHA3-202ENST00000532566 NDST3O95803 873 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 ANXA11P50995 505 aaKnown RBP15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 MPP1Q00013 466 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 TIGD5Q53EQ6 642 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 METTL3Q86U44 580 aaKnown RBP15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 CAMK1DQ8IU85 385 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 EID3Q8N140 333 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 TMEM132CQ8N3T6 1108 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 SEC14L1Q92503 715 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 GATA5Q9BWX5 397 aaPredicted RBP15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 STRA6Q9BX79 667 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 DNAJC28Q9NX36 388 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 C4BP0C0L5 1744 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 TRAV19A0A0A6YYK7 116 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 XYLBO75191 536 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 VCLP18206 1134 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 EML3Q32P44 896 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 ESRP1Q6NXG1 681 aaKnown RBP15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 FBXW8Q8N3Y1 598 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 FAM192AQ9GZU8 254 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 C6orf203Q9P0P8 240 aaPredicted RBP15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 CNTN3Q9P232 1028 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 AP3M1Q9Y2T2 418 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 KCNU1A8MYU2 1149 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 RPP40O75818 363 aaKnown RBP15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 NMBRP28336 390 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 MC4RP32245 332 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 GRK4P32298 578 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 RABGGTBP53611 331 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 DSC2Q02487 901 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 IRF8Q02556 426 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 TP53BP2Q13625 1128 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 PTCD3Q96EY7 689 aaKnown RBP15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 XYLT2Q9H1B5 865 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 TMCC3Q9ULS5 477 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 NR2E3Q9Y5X4 410 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 MAGEC1O60732 1142 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 POLR2EP19388 210 aaKnown RBP15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 GSTA3Q16772 222 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 NCBP2-AS2Q69YL0 99 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 LPCAT2Q7L5N7 544 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 DNAJB14Q8TBM8 379 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 ACTRT2Q8TDY3 377 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 DCAKDQ8WVC6 231 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 RSPH1Q8WYR4 309 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 PPP3R2Q96LZ3 170 aa15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 DENND2DQ9H6A0 471 aaPredicted RBP15.38■□□□□ 0.05
PCDHA3-202ENST00000532566 IFRD1O00458 451 aaPredicted RBP15.37■□□□□ 0.05
PCDHA3-202ENST00000532566 ULK1O75385 1050 aa15.37■□□□□ 0.05
PCDHA3-202ENST00000532566 FGFR3P22607 806 aa15.37■□□□□ 0.05
PCDHA3-202ENST00000532566 RUNX1T1Q06455 604 aa15.37■□□□□ 0.05
PCDHA3-202ENST00000532566 ACOX1Q15067 660 aa15.37■□□□□ 0.05
PCDHA3-202ENST00000532566 SCIMPQ6UWF3 145 aa15.37■□□□□ 0.05
PCDHA3-202ENST00000532566 C15orf39Q6ZRI6 1047 aa15.37■□□□□ 0.05
PCDHA3-202ENST00000532566 ZDHHC13Q8IUH4 622 aa15.37■□□□□ 0.05
PCDHA3-202ENST00000532566 OR4K2Q8NGD2 314 aa15.37■□□□□ 0.05
PCDHA3-202ENST00000532566 LINGO1Q96FE5 620 aa15.37■□□□□ 0.05
PCDHA3-202ENST00000532566 AHSPQ9NZD4 102 aa15.37■□□□□ 0.05
PCDHA3-202ENST00000532566 HNRNPCL2B2RXH8 293 aa15.37■□□□□ 0.05
PCDHA3-202ENST00000532566 MGRN1O60291 552 aa15.37■□□□□ 0.05
PCDHA3-202ENST00000532566 TACR2P21452 398 aa15.37■□□□□ 0.05
PCDHA3-202ENST00000532566 GRK3P35626 688 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms