RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 MMP20O60882 483 aa14.04□□□□□ -0.16
TSPAN4-220ENST00000532375 SYPP08247 313 aa14.04□□□□□ -0.16
TSPAN4-220ENST00000532375 PDHA1P08559 390 aa14.04□□□□□ -0.16
TSPAN4-220ENST00000532375 CCDC175P0C221 793 aa14.04□□□□□ -0.16
TSPAN4-220ENST00000532375 GM2AP17900 193 aa14.04□□□□□ -0.16
TSPAN4-220ENST00000532375 MMP12P39900 470 aa14.04□□□□□ -0.16
TSPAN4-220ENST00000532375 ID4P47928 161 aa14.04□□□□□ -0.16
TSPAN4-220ENST00000532375 SEMG2Q02383 582 aa14.04□□□□□ -0.16
TSPAN4-220ENST00000532375 WASHC5Q12768 1159 aa14.04□□□□□ -0.16
TSPAN4-220ENST00000532375 PTPRRQ15256 657 aa14.04□□□□□ -0.16
TSPAN4-220ENST00000532375 ZNF423Q2M1K9 1284 aa14.04□□□□□ -0.16
TSPAN4-220ENST00000532375 HLA-BQ31612 363 aa14.04□□□□□ -0.16
TSPAN4-220ENST00000532375 DBX2Q6ZNG2 339 aa14.04□□□□□ -0.16
TSPAN4-220ENST00000532375 GCNT7Q6ZNI0 430 aa14.04□□□□□ -0.16
TSPAN4-220ENST00000532375 ABI3BPQ7Z7G0 1075 aa14.04□□□□□ -0.16
TSPAN4-220ENST00000532375 ZSCAN30Q86W11 494 aa14.04□□□□□ -0.16
TSPAN4-220ENST00000532375 SPATS2Q86XZ4 545 aaKnown RBP14.04□□□□□ -0.16
TSPAN4-220ENST00000532375 BBS5Q8N3I7 341 aa14.04□□□□□ -0.16
TSPAN4-220ENST00000532375 PIH1D2Q8WWB5 315 aa14.04□□□□□ -0.16
TSPAN4-220ENST00000532375 TADA1Q96BN2 335 aa14.04□□□□□ -0.16
TSPAN4-220ENST00000532375 CENPTQ96BT3 561 aa14.04□□□□□ -0.16
TSPAN4-220ENST00000532375 LENG8Q96PV6 779 aaPredicted RBP14.04□□□□□ -0.16
TSPAN4-220ENST00000532375 TSGA10Q9BZW7 698 aa14.04□□□□□ -0.16
TSPAN4-220ENST00000532375 POLR1EQ9GZS1 481 aaKnown RBP14.04□□□□□ -0.16
TSPAN4-220ENST00000532375 FZD3Q9NPG1 666 aa14.04□□□□□ -0.16
TSPAN4-220ENST00000532375 GPR27Q9NS67 375 aa14.04□□□□□ -0.16
TSPAN4-220ENST00000532375 HS3ST3A1Q9Y663 406 aa14.04□□□□□ -0.16
TSPAN4-220ENST00000532375 POM121BA6NF01 834 aa14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 H0Y8X5 98 aa14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 APOC4-APOC2K7ER74 178 aa14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 TLR4O00206 839 aa14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 KRT86O43790 486 aa14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 PGLSO95336 258 aa14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 APOC2P02655 101 aa14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 CD59P13987 128 aa14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 HNRNPA2B1P22626 353 aaKnown RBP14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 CES1P23141 567 aa14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 PTPN3P26045 913 aa14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 CLDN2P57739 230 aa14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 NXPH1P58417 271 aa14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 AP1B1Q10567 949 aa14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 ZNF211Q13398 564 aaPredicted RBP14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 PUM1Q14671 1186 aaKnown RBP eCLIP14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 AGERQ15109 404 aa14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 NOMO1Q15155 1222 aa14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 SHBQ15464 509 aa14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 TEX44Q53QW1 395 aa14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 ODF2Q5BJF6 829 aa14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 IQCHQ86VS3 1027 aa14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 CCDC50Q8IVM0 306 aa14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 P3H4Q92791 437 aa14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 TEKT5Q96M29 485 aa14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 ZNF830Q96NB3 372 aaPredicted RBP14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 SMIM14Q96QK8 99 aa14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 RTKNQ9BST9 563 aa14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 GTPBP2Q9BX10 602 aaKnown RBP14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 CEP41Q9BYV8 373 aa14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 CDV3Q9UKY7 258 aaKnown RBP14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 FNDC3AQ9Y2H6 1198 aaKnown RBP14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 PPP2R2CQ9Y2T4 447 aa14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 PCDHB9Q9Y5E1 797 aa14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 RAI2Q9Y5P3 530 aa14.03□□□□□ -0.16
TSPAN4-220ENST00000532375 TDRD6O60522 2096 aaKnown RBP14.02□□□□□ -0.16
TSPAN4-220ENST00000532375 DCDC2BA2VCK2 349 aa14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 CFAP69A5D8W1 941 aa14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 PPP1R12AO14974 1030 aaPredicted RBP14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 ZNF883P0CG24 379 aa14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 SDHBP21912 280 aa14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 CD68P34810 354 aaPredicted RBP14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 POLR2LP62875 67 aaKnown RBP14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 SKOR1P84550 965 aa14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 ELP6Q0PNE2 266 aa14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 KLF1Q13351 362 aaPredicted RBP14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 XRCC4Q13426 336 aa14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 STAT4Q14765 748 aa14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 TEAD4Q15561 434 aa14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 PRAMEF14Q5SWL7 426 aa14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 MEI1Q5TIA1 1274 aa14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 LIPIQ6XZB0 460 aa14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 KDM7AQ6ZMT4 941 aa14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 DPPA4Q7L190 304 aa14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 BZW1Q7L1Q6 419 aaKnown RBP14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 PIP4P1Q86T03 277 aa14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 TP53I13Q8NBR0 393 aaPredicted RBP14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 ACTL9Q8TC94 416 aa14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 UBE2Q2Q8WVN8 375 aa14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 HAUS1Q96CS2 278 aa14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 MCCC1Q96RQ3 725 aaPredicted RBP14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 MYOCQ99972 504 aa14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 WRAP53Q9BUR4 548 aaKnown RBP14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 GAREM1Q9H706 876 aa14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 CAAP1Q9H8G2 361 aa14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 MBNL1Q9NR56 388 aaKnown RBP14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 AASDHPPTQ9NRN7 309 aa14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 PHTF1Q9UMS5 762 aa14.02□□□□□ -0.17
TSPAN4-220ENST00000532375 A0A1W2PQ67 120 aa14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 TCRBV7S2A1N4TA0A589 114 aa14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 NEMP1O14524 444 aa14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 TM7SF2O76062 418 aa14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 C6P13671 934 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms