RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 WRAP53Q9BUR4 548 aaKnown RBP11.35□□□□□ -0.59
PTPRK-221ENST00000532331 KLHL3Q9UH77 587 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 CHKBQ9Y259 395 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 UBOX5O94941 541 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 ATP6V1B1P15313 513 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 MC4RP32245 332 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 RAD23AP54725 363 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 TRAF2Q12933 501 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 TAPT1Q6NXT6 567 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 EIF1ADQ8N9N8 165 aaKnown RBP11.35□□□□□ -0.59
PTPRK-221ENST00000532331 STARD8Q92502 1023 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 FBXL18Q96ME1 805 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 NTPCRQ9BSD7 190 aaKnown RBP11.35□□□□□ -0.59
PTPRK-221ENST00000532331 HGH1Q9BTY7 390 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 RNF39Q9H2S5 420 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 CCDC154A6NI56 674 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 LIASO43766 372 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 TIMP1P01033 207 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 ZSCAN5DPP0CG00 497 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 CYBAP13498 195 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 NTSP30990 170 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 GNA13Q14344 377 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 PTPRNQ16849 979 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 TRMT5Q32P41 509 aaKnown RBP11.35□□□□□ -0.59
PTPRK-221ENST00000532331 FAM98BQ52LJ0 330 aaKnown RBP11.35□□□□□ -0.59
PTPRK-221ENST00000532331 FAM43BQ6ZT52 329 aaPredicted RBP11.35□□□□□ -0.59
PTPRK-221ENST00000532331 TAC4Q86UU9 113 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 CMTR2Q8IYT2 770 aaKnown RBP11.35□□□□□ -0.59
PTPRK-221ENST00000532331 DSELQ8IZU8 1212 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 ALLCQ8N6M5 410 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 AENQ8WTP8 325 aaKnown RBP11.35□□□□□ -0.59
PTPRK-221ENST00000532331 CLIP3Q96DZ5 547 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 PGM2Q96G03 612 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 MRPL48Q96GC5 212 aaKnown RBP11.35□□□□□ -0.59
PTPRK-221ENST00000532331 DPEP2Q9H4A9 486 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 AGO3Q9H9G7 860 aaKnown RBP11.35□□□□□ -0.59
PTPRK-221ENST00000532331 KCTD5Q9NXV2 234 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 DLGAP2Q9P1A6 1054 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 PDP2Q9P2J9 529 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 RAI2Q9Y5P3 530 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 PRR23D1E9PI22 279 aaPredicted RBP11.35□□□□□ -0.59
PTPRK-221ENST00000532331 SH3BGRLO75368 114 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 ABCB1P08183 1280 aaPredicted RBP11.35□□□□□ -0.59
PTPRK-221ENST00000532331 PRR23D2P0DMB1 279 aaPredicted RBP11.35□□□□□ -0.59
PTPRK-221ENST00000532331 WNT3AP56704 352 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 ATP13A4Q4VNC1 1196 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 PMF1Q6P1K2 205 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 SLC26A9Q7LBE3 791 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 TMPRSS6Q8IU80 811 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 CDK20Q8IZL9 346 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 ATG16L2Q8NAA4 619 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 OXNAD1Q96HP4 312 aaPredicted RBP11.35□□□□□ -0.59
PTPRK-221ENST00000532331 GTPBP2Q9BX10 602 aaKnown RBP11.35□□□□□ -0.59
PTPRK-221ENST00000532331 COLEC10Q9Y6Z7 277 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 ANXA6P08133 673 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 GJA1P17302 382 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 GATMP50440 423 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 ACSM2AQ08AH3 577 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 CRYMQ14894 314 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 ADRM1Q16186 407 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 TBCELQ5QJ74 424 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 ACSM2BQ68CK6 577 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 SERINC5Q86VE9 423 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 AP2M1Q96CW1 435 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 IGSF21Q96ID5 467 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 NSMCE2Q96MF7 247 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 KREMEN1Q96MU8 473 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 PIF1Q9H611 641 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 SFXN1Q9H9B4 322 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 CNTN3Q9P232 1028 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 TOPAZ1Q8N9V7 1692 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 hCG_2014768A0A024R1R8 64 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 H3BQF6 201 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 CLK3P49761 638 aaKnown RBP11.34□□□□□ -0.59
PTPRK-221ENST00000532331 DAOAP59103 153 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 AUHQ13825 339 aaKnown RBP11.34□□□□□ -0.59
PTPRK-221ENST00000532331 ZNHIT3Q15649 155 aaPredicted RBP11.34□□□□□ -0.59
PTPRK-221ENST00000532331 CNSTQ6PJW8 725 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 EFCAB3Q8N7B9 438 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 STAG3L4Q8TBR4 150 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 FGFBP2Q9BYJ0 223 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 PCDH18Q9HCL0 1135 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 FBXO6Q9NRD1 293 aaPredicted RBP11.34□□□□□ -0.59
PTPRK-221ENST00000532331 TMCO1Q9UM00 188 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 ADGRA3Q8IWK6 1321 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 FCHO1O14526 889 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 SGTAO43765 313 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 OR10H2O60403 315 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 PRMT3O60678 531 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 AVILO75366 819 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 CDK14O94921 469 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 ENO2P09104 434 aaPredicted RBP11.34□□□□□ -0.59
PTPRK-221ENST00000532331 ZNF865P0CJ78 1059 aaPredicted RBP11.34□□□□□ -0.59
PTPRK-221ENST00000532331 HPCAL1P37235 193 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 RABGGTBP53611 331 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 IFI35P80217 286 aaPredicted RBP11.34□□□□□ -0.59
PTPRK-221ENST00000532331 TEAD2Q15562 447 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 ZBTB49Q6ZSB9 765 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 SIAH1Q8IUQ4 282 aa11.34□□□□□ -0.59
PTPRK-221ENST00000532331 FAM126BQ8IXS8 530 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms