RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 RBM41Q96IZ5 413 aaKnown RBP10.9□□□□□ -0.66
GPATCH4-216ENST00000531900 ZNF830Q96NB3 372 aaPredicted RBP10.9□□□□□ -0.66
GPATCH4-216ENST00000531900 SCNM1Q9BWG6 230 aa10.9□□□□□ -0.66
GPATCH4-216ENST00000531900 POLR1EQ9GZS1 481 aaKnown RBP10.9□□□□□ -0.66
GPATCH4-216ENST00000531900 GOLPH3Q9H4A6 298 aa10.9□□□□□ -0.66
GPATCH4-216ENST00000531900 GAREM1Q9H706 876 aa10.9□□□□□ -0.66
GPATCH4-216ENST00000531900 NOD2Q9HC29 1040 aa10.9□□□□□ -0.66
GPATCH4-216ENST00000531900 HAUS2Q9NVX0 235 aa10.9□□□□□ -0.66
GPATCH4-216ENST00000531900 ATP8A1Q9Y2Q0 1164 aa10.9□□□□□ -0.66
GPATCH4-216ENST00000531900 SNX11Q9Y5W9 270 aa10.9□□□□□ -0.66
GPATCH4-216ENST00000531900 ADGRG1Q9Y653 693 aa10.9□□□□□ -0.66
GPATCH4-216ENST00000531900 MAP1BP46821 2468 aaKnown RBP10.9□□□□□ -0.67
GPATCH4-216ENST00000531900 hCG_1818297A0A087WSY0 165 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 A0A1B0GTQ1 180 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 GRID2IPA4D2P6 1211 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 YKT6O15498 198 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 KRT37O76014 449 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 PAK4O96013 591 aaPredicted RBP10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 SPINK2P20155 84 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 MAT2AP31153 395 aaKnown RBP10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 AKT2P31751 481 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 MMP12P39900 470 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 C21orf59P57076 290 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 ADCY2Q08462 1091 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 SLC14A2Q15849 920 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 ODF2Q5BJF6 829 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 GCNT7Q6ZNI0 430 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 BBS12Q6ZW61 710 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 ADAT2Q7Z6V5 191 aaKnown RBP10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 KIAA1328Q86T90 577 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 NT5DC3Q86UY8 548 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 NAXDQ8IW45 347 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 LRRC8AQ8IWT6 810 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 RAVER1Q8IY67 606 aaKnown RBP10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 SYCE1Q8N0S2 351 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 OXR1Q8N573 874 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 ARRDC2Q8TBH0 407 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 KRT35Q92764 455 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 IFT43Q96FT9 208 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 BMFQ96LC9 184 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 MCCC1Q96RQ3 725 aaPredicted RBP10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 ELF4Q99607 663 aaPredicted RBP10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 PCDH12Q9NPG4 1184 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 GDF3Q9NR23 364 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 AASDHPPTQ9NRN7 309 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 TM7SF3Q9NS93 570 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 RBM22Q9NW64 420 aaKnown RBP eCLIP10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 GGT7Q9UJ14 662 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 WASF3Q9UPY6 502 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 NEUROG3Q9Y4Z2 214 aa10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 TDRD6O60522 2096 aaKnown RBP10.89□□□□□ -0.67
GPATCH4-216ENST00000531900 TMEM8BA6NDV4 472 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 IGLON5A6NGN9 336 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 MIF4GDA9UHW6 222 aaKnown RBP10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 C1QTNF9BB2RNN3 333 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 H0Y8X5 98 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 NEMP1O14524 444 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 PPP1R12AO14974 1030 aaPredicted RBP10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 SLC31A1O15431 190 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 HYAL3O43820 417 aaPredicted RBP10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 CST8O60676 142 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 CBFA2T3O75081 653 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 TM7SF2O76062 418 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 PGLSO95336 258 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 C1QTNF9P0C862 333 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 PRLRP16471 622 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 NFKBIAP25963 317 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 MARCKSL1P49006 195 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 RPL26P61254 145 aaKnown RBP10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 TRAF2Q12933 501 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 RALGDSQ12967 914 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 SGCGQ13326 291 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 IHHQ14623 411 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 PRKD1Q15139 912 aaPredicted RBP10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 ERAP2Q6P179 960 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 KYAT3Q6YP21 454 aaKnown RBP10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 DPPA4Q7L190 304 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 SPATS2Q86XZ4 545 aaKnown RBP10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 RFX6Q8HWS3 928 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 CNTD1Q8N815 330 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 BAHD1Q8TBE0 780 aaPredicted RBP10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 SETD7Q8WTS6 366 aaKnown RBP10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 TADA1Q96BN2 335 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 SCRN2Q96FV2 425 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 KLHDC7BQ96G42 594 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 CAMK1GQ96NX5 476 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 LGMNQ99538 433 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 SEMA3CQ99985 751 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 DESI2Q9BSY9 194 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 TSGA10Q9BZW7 698 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 GRPEL1Q9HAV7 217 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 IL21RQ9HBE5 538 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 NT5MQ9NPB1 228 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 SCUBE2Q9NQ36 999 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 KCTD5Q9NXV2 234 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 PHTF1Q9UMS5 762 aa10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 RPL26L1Q9UNX3 145 aaKnown RBP10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 APOBEC2Q9Y235 224 aaKnown RBP10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 FNDC3AQ9Y2H6 1198 aaKnown RBP10.88□□□□□ -0.67
GPATCH4-216ENST00000531900 MSRB2Q9Y3D2 182 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms